File: Makefile.in

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am__dist_appiconSVG_DATA_DIST = data/icons/scalable/opencfu.svg
am__dist_application_DATA_DIST = packagingScripts/opencfu.desktop
am__nobase_dist_opencfu_DATA_DIST = data/trainedClassifier.xml \
	data/trainedClassifierPS.xml data/banner.png data/logo.png \
	data/noise-texture.png
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	$(dist_appiconSVG_DATA) $(dist_application_DATA) \
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am__tagged_files = $(HEADERS) $(SOURCES) $(TAGS_FILES) \
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am__post_remove_distdir = $(am__remove_distdir)
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GZIP_ENV = --best
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am__distuninstallcheck_listfiles = $(distuninstallcheck_listfiles) \
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AMTAR = @AMTAR@
AM_DEFAULT_VERBOSITY = @AM_DEFAULT_VERBOSITY@
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PACKAGE_TARNAME = @PACKAGE_TARNAME@
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host_alias = @host_alias@
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ACLOCAL_AMFLAGS = ${ACLOCAL_FLAGS}
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#AM_LDFLAGS =    -fopenmp
AM_LDFLAGS = -Wall ${OPENMP_CFLAGS} $(am__append_2) $(am__append_5)
trainer_SOURCES = src/classifier/main.cpp \
	src/classifier/src/DataMaker.cpp \
	src/processor/src/Predictor.cpp \
	src/processor/src/ContourFamily.cpp \
	src/processor/src/Features.cpp \
	src/classifier/headers/DataMaker.hpp src/defines.hpp
trainer_CPPFLAGS = -Isrc/classifier/headers/ \
					-Isrc/processor/headers/

trainer_LDADD = ${OPENCV_LIBS}
TRAINED_CLASSIF = data/trainedClassifier.xml
TRAINED_CLASSIF_PS = data/trainedClassifierPS.xml
DESKTOP_FILE = $(PKG_SCRIPT_DIR)/opencfu.desktop
EXTRA_DIST = \
data/training-set1/Mult_B_0.png\
data/training-set1/Mult_C_0.png\
data/training-set1/Mult_D_0.png\
data/training-set1/Neg_B_0.png\
data/training-set1/Sing_A_0.png\
data/training-set1/Sing_C_0.png\
data/training-set2/Neg_psB_1.png\
data/training-set2/Sing_psA_1.png\
data/training-set2/Sing_psc_1.png\
$(DESKTOP_FILE)


#NJL 13/AUG/2014
#Step_ColourCluster.cpp/hpp added
opencfu_SOURCES = src/main.cpp src/processor/src/ArgumentParser.cpp \
	src/processor/src/ProcessingOptions.cpp \
	src/processor/src/Step_BaseClass.cpp \
	src/processor/src/Processor.cpp src/processor/src/Step_2.cpp \
	src/processor/src/Step_3.cpp src/processor/src/Result.cpp \
	src/processor/src/Features.cpp \
	src/processor/src/Step_FiltGUI.cpp \
	src/processor/src/Step_FiltHS.cpp \
	src/processor/src/Step_FiltIPosition2D.cpp \
	src/processor/src/Step_FiltLik.cpp \
	src/processor/src/Step_1.cpp src/processor/src/Step_4.cpp \
	src/processor/src/ContourFamily.cpp \
	src/processor/src/Predictor.cpp \
	src/processor/src/ContourSpliter.cpp \
	src/processor/src/MaskROI.cpp \
	src/processor/src/Step_ColourCluster.cpp \
	src/processor/headers/Features.hpp \
	src/processor/headers/Step_BaseClass.hpp \
	src/processor/headers/Predictor.hpp \
	src/processor/headers/ProcessingOptions.hpp \
	src/processor/headers/Step_4.hpp \
	src/processor/headers/Step_1.hpp \
	src/processor/headers/Processor.hpp \
	src/processor/headers/Result.hpp \
	src/processor/headers/ContourSpliter.hpp \
	src/processor/headers/Step_FiltLik.hpp \
	src/processor/headers/Step_3.hpp \
	src/processor/headers/Step_FiltHS.hpp \
	src/processor/headers/Step_FiltGUI.hpp \
	src/processor/headers/Step_FiltIPosition2D.hpp \
	src/processor/headers/Step_2.hpp \
	src/processor/headers/ArgumentParser.hpp \
	src/processor/headers/ContourFamily.hpp \
	src/processor/headers/MaskROI.hpp \
	src/processor/headers/Step_ColourCluster.hpp $(am__append_6)
opencfu_CPPFLAGS = -Isrc/processor/headers/ \
	-DINSTALLDIR='"$(pkgdatadir)"' $(am__append_7)
opencfu_LDADD = ${OPENCV_LIBS} $(am__append_8)
opencfudir = $(pkgdatadir)
nobase_dist_opencfu_DATA = $(TRAINED_CLASSIF) $(TRAINED_CLASSIF_PS) \
	$(am__append_3)

#\
#data/icon_128px.png data/icon_64px.png data/icon_48px.png data/icon_24px.png

###LINUX PACKAGING
@USE_GUI_TRUE@applicationdir = $(datadir)/applications
@USE_GUI_TRUE@dist_application_DATA = packagingScripts/opencfu.desktop
@USE_GUI_TRUE@appiconSVGdir = $(datadir)/icons/hicolor/scalable/apps
@USE_GUI_TRUE@dist_appiconSVG_DATA = data/icons/scalable/opencfu.svg
@USE_GUI_TRUE@appicon128dir = $(datadir)/icons/hicolor/128x128/apps
@USE_GUI_TRUE@dist_appicon128_DATA = data/icons/128x128/opencfu.png
@USE_GUI_TRUE@appicon48dir = $(datadir)/icons/hicolor/48x48/apps
@USE_GUI_TRUE@dist_appicon48_DATA = data/icons/48x48/opencfu.png
PKG_SCRIPT_DIR = ./packagingScripts
MD5_FILE = $(PKG_SCRIPT_DIR)/md5.txt
MD5 = `cat $(MD5_FILE)`
PKGBUILD_FILE = $(PKG_SCRIPT_DIR)/PKGBUILD
TMP_DEB := $(shell mktemp --suffix='.opencfu' -u)
#~ DEB_TAR:=$(TMP_DEB)$(DIST_ARCHIVES)
DEB_TAR := $(shell echo $(TMP_DEB)/$(DIST_ARCHIVES)| sed s/"-"/"_"/ |  sed s/".tar."/".orig.tar."/)
DEB_DIR := $(PKG_SCRIPT_DIR)/debian
all: config.h
	$(MAKE) $(AM_MAKEFLAGS) all-am

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src/gui/src/opencfu-Gui_ColourSelector.o: src/gui/src/Gui_ColourSelector.cpp
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src/gui/src/opencfu-Gui_ColourSelector.obj: src/gui/src/Gui_ColourSelector.cpp
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src/gui/src/opencfu-Gui_ColourWheel.o: src/gui/src/Gui_ColourWheel.cpp
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src/gui/src/opencfu-Gui_ControlPanel.o: src/gui/src/Gui_ControlPanel.cpp
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src/gui/src/opencfu-Gui_ControlPanel.obj: src/gui/src/Gui_ControlPanel.cpp
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src/gui/src/opencfu-Gui_Decorator.o: src/gui/src/Gui_Decorator.cpp
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src/gui/src/opencfu-Gui_DisplayBaseClass.o: src/gui/src/Gui_DisplayBaseClass.cpp
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src/gui/src/opencfu-Gui_DisplayRoi.o: src/gui/src/Gui_DisplayRoi.cpp
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src/gui/src/opencfu-Gui_ImgFileSetter.o: src/gui/src/Gui_ImgFileSetter.cpp
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src/gui/src/opencfu-Gui_ImgFileSetter.obj: src/gui/src/Gui_ImgFileSetter.cpp
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src/gui/src/opencfu-Gui_LikFiltSelector.o: src/gui/src/Gui_LikFiltSelector.cpp
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src/gui/src/opencfu-Gui_LikFiltSelector.obj: src/gui/src/Gui_LikFiltSelector.cpp
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src/gui/src/opencfu-Gui_MouseHandler.o: src/gui/src/Gui_MouseHandler.cpp
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src/gui/src/opencfu-Gui_MouseHandler.obj: src/gui/src/Gui_MouseHandler.cpp
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src/gui/src/opencfu-Gui_MaskSetter.o: src/gui/src/Gui_MaskSetter.cpp
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src/gui/src/opencfu-Gui_MaskSetter.obj: src/gui/src/Gui_MaskSetter.cpp
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src/gui/src/opencfu-Gui_MyApplication.o: src/gui/src/Gui_MyApplication.cpp
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src/gui/src/opencfu-Gui_MyApplication.obj: src/gui/src/Gui_MyApplication.cpp
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src/gui/src/opencfu-Gui_MyWindow.o: src/gui/src/Gui_MyWindow.cpp
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src/gui/src/opencfu-Gui_MyWindow.obj: src/gui/src/Gui_MyWindow.cpp
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src/gui/src/opencfu-Gui_OptionSetterBaseClass.o: src/gui/src/Gui_OptionSetterBaseClass.cpp
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src/gui/src/opencfu-Gui_OptionSetterBaseClass.obj: src/gui/src/Gui_OptionSetterBaseClass.cpp
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src/gui/src/opencfu-Gui_ProcessorHandler.o: src/gui/src/Gui_ProcessorHandler.cpp
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src/gui/src/opencfu-Gui_ProcessorHandler.obj: src/gui/src/Gui_ProcessorHandler.cpp
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src/gui/src/opencfu-Gui_RadiusSetter.o: src/gui/src/Gui_RadiusSetter.cpp
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src/gui/src/opencfu-Gui_RadiusSetter.obj: src/gui/src/Gui_RadiusSetter.cpp
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src/gui/src/opencfu-Gui_ResultDetails.o: src/gui/src/Gui_ResultDetails.cpp
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src/gui/src/opencfu-Gui_ResultDetails.obj: src/gui/src/Gui_ResultDetails.cpp
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src/gui/src/opencfu-Gui_ResultDisplayBaseClass.o: src/gui/src/Gui_ResultDisplayBaseClass.cpp
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src/gui/src/opencfu-Gui_ResultDisplayBaseClass.obj: src/gui/src/Gui_ResultDisplayBaseClass.cpp
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src/gui/src/opencfu-Gui_ResultFileWriter.o: src/gui/src/Gui_ResultFileWriter.cpp
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src/gui/src/opencfu-Gui_ResultFileWriter.obj: src/gui/src/Gui_ResultFileWriter.cpp
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src/gui/src/opencfu-Gui_ResultFrame.o: src/gui/src/Gui_ResultFrame.cpp
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src/gui/src/opencfu-Gui_ResultFrame.obj: src/gui/src/Gui_ResultFrame.cpp
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src/gui/src/opencfu-Gui_ResultLabel.o: src/gui/src/Gui_ResultLabel.cpp
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src/gui/src/opencfu-Gui_ResultLabel.obj: src/gui/src/Gui_ResultLabel.cpp
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src/gui/src/opencfu-Gui_ResultListDisplay.o: src/gui/src/Gui_ResultListDisplay.cpp
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src/gui/src/opencfu-Gui_ResultListDisplay.obj: src/gui/src/Gui_ResultListDisplay.cpp
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src/gui/src/opencfu-Gui_ThresholdSetter.o: src/gui/src/Gui_ThresholdSetter.cpp
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src/gui/src/opencfu-Gui_ThresholdSetter.obj: src/gui/src/Gui_ThresholdSetter.cpp
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src/gui/src/opencfu-Gui_ConfigIO.o: src/gui/src/Gui_ConfigIO.cpp
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src/gui/src/opencfu-Gui_ConfigIO.obj: src/gui/src/Gui_ConfigIO.cpp
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src/gui/src/opencfu-Gui_HelloWindow.o: src/gui/src/Gui_HelloWindow.cpp
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src/gui/src/opencfu-Gui_HelloWindow.obj: src/gui/src/Gui_HelloWindow.cpp
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src/gui/src/opencfu-ResultMap.o: src/gui/src/ResultMap.cpp
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src/gui/src/opencfu-ResultMap.obj: src/gui/src/ResultMap.cpp
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src/gui/src/opencfu-Gui_UserFilterSetter.o: src/gui/src/Gui_UserFilterSetter.cpp
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src/gui/src/opencfu-Gui_UserFilterSetter.obj: src/gui/src/Gui_UserFilterSetter.cpp
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src/gui/src/opencfu-Gui_PixbufOpener.o: src/gui/src/Gui_PixbufOpener.cpp
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src/gui/src/opencfu-Gui_PixbufOpener.obj: src/gui/src/Gui_PixbufOpener.cpp
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src/gui/src/opencfu-Gui_ColourCluster.o: src/gui/src/Gui_ColourCluster.cpp
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src/gui/src/opencfu-Gui_ColourCluster.obj: src/gui/src/Gui_ColourCluster.cpp
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	  if test -d $$d/$$file; then \
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	    if test -d "$(distdir)/$$file"; then \
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	      find "$(distdir)/$$file" -type d ! -perm -700 -exec chmod u+rwx {} \;; \
	    fi; \
	    cp -fpR $$d/$$file "$(distdir)$$dir" || exit 1; \
	  else \
	    test -f "$(distdir)/$$file" \
	    || cp -p $$d/$$file "$(distdir)/$$file" \
	    || exit 1; \
	  fi; \
	done
	-test -n "$(am__skip_mode_fix)" \
	|| find "$(distdir)" -type d ! -perm -755 \
		-exec chmod u+rwx,go+rx {} \; -o \
	  ! -type d ! -perm -444 -links 1 -exec chmod a+r {} \; -o \
	  ! -type d ! -perm -400 -exec chmod a+r {} \; -o \
	  ! -type d ! -perm -444 -exec $(install_sh) -c -m a+r {} {} \; \
	|| chmod -R a+r "$(distdir)"
dist-gzip: distdir
	tardir=$(distdir) && $(am__tar) | GZIP=$(GZIP_ENV) gzip -c >$(distdir).tar.gz
	$(am__post_remove_distdir)

dist-bzip2: distdir
	tardir=$(distdir) && $(am__tar) | BZIP2=$${BZIP2--9} bzip2 -c >$(distdir).tar.bz2
	$(am__post_remove_distdir)

dist-lzip: distdir
	tardir=$(distdir) && $(am__tar) | lzip -c $${LZIP_OPT--9} >$(distdir).tar.lz
	$(am__post_remove_distdir)

dist-xz: distdir
	tardir=$(distdir) && $(am__tar) | XZ_OPT=$${XZ_OPT--e} xz -c >$(distdir).tar.xz
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dist-tarZ: distdir
	@echo WARNING: "Support for shar distribution archives is" \
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	@echo WARNING: "It will be removed altogether in Automake 2.0" >&2
	tardir=$(distdir) && $(am__tar) | compress -c >$(distdir).tar.Z
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dist-shar: distdir
	@echo WARNING: "Support for distribution archives compressed with" \
		       "legacy program 'compress' is deprecated." >&2
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dist-zip: distdir
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dist dist-all:
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# This target untars the dist file and tries a VPATH configuration.  Then
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	case '$(DIST_ARCHIVES)' in \
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	  GZIP=$(GZIP_ENV) gzip -dc $(distdir).tar.gz | $(am__untar) ;;\
	*.tar.bz2*) \
	  bzip2 -dc $(distdir).tar.bz2 | $(am__untar) ;;\
	*.tar.lz*) \
	  lzip -dc $(distdir).tar.lz | $(am__untar) ;;\
	*.tar.xz*) \
	  xz -dc $(distdir).tar.xz | $(am__untar) ;;\
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	  uncompress -c $(distdir).tar.Z | $(am__untar) ;;\
	*.shar.gz*) \
	  GZIP=$(GZIP_ENV) gzip -dc $(distdir).shar.gz | unshar ;;\
	*.zip*) \
	  unzip $(distdir).zip ;;\
	esac
	chmod -R a-w $(distdir)
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	chmod a-w $(distdir)
	test -d $(distdir)/_build || exit 0; \
	dc_install_base=`$(am__cd) $(distdir)/_inst && pwd | sed -e 's,^[^:\\/]:[\\/],/,'` \
	  && dc_destdir="$${TMPDIR-/tmp}/am-dc-$$$$/" \
	  && am__cwd=`pwd` \
	  && $(am__cd) $(distdir)/_build \
	  && ../configure \
	    $(AM_DISTCHECK_CONFIGURE_FLAGS) \
	    $(DISTCHECK_CONFIGURE_FLAGS) \
	    --srcdir=.. --prefix="$$dc_install_base" \
	  && $(MAKE) $(AM_MAKEFLAGS) \
	  && $(MAKE) $(AM_MAKEFLAGS) dvi \
	  && $(MAKE) $(AM_MAKEFLAGS) check \
	  && $(MAKE) $(AM_MAKEFLAGS) install \
	  && $(MAKE) $(AM_MAKEFLAGS) installcheck \
	  && $(MAKE) $(AM_MAKEFLAGS) uninstall \
	  && $(MAKE) $(AM_MAKEFLAGS) distuninstallcheck_dir="$$dc_install_base" \
	        distuninstallcheck \
	  && chmod -R a-w "$$dc_install_base" \
	  && ({ \
	       (cd ../.. && umask 077 && mkdir "$$dc_destdir") \
	       && $(MAKE) $(AM_MAKEFLAGS) DESTDIR="$$dc_destdir" install \
	       && $(MAKE) $(AM_MAKEFLAGS) DESTDIR="$$dc_destdir" uninstall \
	       && $(MAKE) $(AM_MAKEFLAGS) DESTDIR="$$dc_destdir" \
	            distuninstallcheck_dir="$$dc_destdir" distuninstallcheck; \
	      } || { rm -rf "$$dc_destdir"; exit 1; }) \
	  && rm -rf "$$dc_destdir" \
	  && $(MAKE) $(AM_MAKEFLAGS) dist \
	  && rm -rf $(DIST_ARCHIVES) \
	  && $(MAKE) $(AM_MAKEFLAGS) distcleancheck \
	  && cd "$$am__cwd" \
	  || exit 1
	$(am__post_remove_distdir)
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	  list='$(DIST_ARCHIVES)'; for i in $$list; do echo $$i; done) | \
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distuninstallcheck:
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	  echo 'ERROR: trying to run $@ with an empty' \
	       '$$(distuninstallcheck_dir)' >&2; \
	  exit 1; \
	}; \
	$(am__cd) '$(distuninstallcheck_dir)' || { \
	  echo 'ERROR: cannot chdir into $(distuninstallcheck_dir)' >&2; \
	  exit 1; \
	}; \
	test `$(am__distuninstallcheck_listfiles) | wc -l` -eq 0 \
	   || { echo "ERROR: files left after uninstall:" ; \
	        if test -n "$(DESTDIR)"; then \
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	        fi ; \
	        $(distuninstallcheck_listfiles) ; \
	        exit 1; } >&2
distcleancheck: distclean
	@if test '$(srcdir)' = . ; then \
	  echo "ERROR: distcleancheck can only run from a VPATH build" ; \
	  exit 1 ; \
	fi
	@test `$(distcleancheck_listfiles) | wc -l` -eq 0 \
	  || { echo "ERROR: files left in build directory after distclean:" ; \
	       $(distcleancheck_listfiles) ; \
	       exit 1; } >&2
check-am: all-am
check: check-am
all-am: Makefile $(PROGRAMS) $(DATA) config.h
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install-exec: install-exec-am
install-data: install-data-am
uninstall: uninstall-am

install-am: all-am
	@$(MAKE) $(AM_MAKEFLAGS) install-exec-am install-data-am

installcheck: installcheck-am
install-strip:
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	  $(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
	    install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
	      install; \
	else \
	  $(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
	    install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
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mostlyclean-generic:

clean-generic:

distclean-generic:
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clean: clean-am

clean-am: clean-binPROGRAMS clean-generic clean-local \
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dvi: dvi-am

dvi-am:

html: html-am

html-am:

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info-am:

install-data-am: install-dist_appicon128DATA \
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install-dvi: install-dvi-am

install-dvi-am:

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install-html: install-html-am

install-html-am:

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pdf: pdf-am

pdf-am:

ps: ps-am

ps-am:

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.MAKE: all install-am install-strip

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@DEV_MODE_TRUE@	AM_CXXFLAGS += -pg
@DEV_MODE_TRUE@	AM_LDFLAGS += -pg
@DEV_MODE_TRUE@	BETA = BETA

$(TRAINED_CLASSIF): trainer
	./trainer t $(TRAINED_CLASSIF)
	./trainer w $(TRAINED_CLASSIF)

$(TRAINED_CLASSIF_PS): trainer
	./trainer t $(TRAINED_CLASSIF_PS) ps
	./trainer w $(TRAINED_CLASSIF_PS) ps

clean-local:
	rm -f $(TRAINED_CLASSIF)
	rm -f $(TRAINED_CLASSIF_PS)
	rm -f *.tar.gz
	rm -f *.exe
$(MD5_FILE): dist
	md5sum  $(DIST_ARCHIVES) | cut -f 1 -d ' ' > $(MD5_FILE)

publish_windows:$(bin_PROGRAMS) $(TRAINED_CLASSIF) $(TRAINED_CLASSIF_PS) $(VERSION_FILE)
	$(eval SETUP_NAME="OpenCFU-$(VERSION)$(BETA)_setup.exe")
	sed s/^AppVerName=.*/AppVerName=$(VERSION)/ $(PKG_SCRIPT_DIR)/OpenCFU_noVersion.iss > $(PKG_SCRIPT_DIR)/OpenCFU.iss
	ISCC.exe $(PKG_SCRIPT_DIR)/OpenCFU.iss
	mv setup.exe $(SETUP_NAME)
	rsync -avP -e ssh $(SETUP_NAME) quentelery,opencfu@frs.sourceforge.net:/home/frs/project/o/op/opencfu/windows

$(PKGBUILD_FILE): $(bin_PROGRAMS) $(TRAINED_CLASSIF) $(TRAINED_CLASSIF_PS) $(MD5_FILE)
	sed s/^pkgver=.*/pkgver=$(VERSION)/ $(PKGBUILD_FILE).template > $(PKGBUILD_FILE)
	mv $(PKGBUILD_FILE) $(PKGBUILD_FILE).template
	sed s/"^md5sums=('.*')"/"md5sums=($(MD5))"/ $(PKGBUILD_FILE).template > $(PKGBUILD_FILE)

publish_linux: $(DESKTOP_FILE) $(PKGBUILD_FILE) $(DESKTOP_FILE)
	rsync -avP -e ssh $(DIST_ARCHIVES) quentelery,opencfu@frs.sourceforge.net:/home/frs/project/o/op/opencfu/linux
deb: dist
	mkdir $(TMP_DEB)
	cp $(DIST_ARCHIVES) $(DEB_TAR)
	cp $(PKG_SCRIPT_DIR)/Makefile-deb $(TMP_DEB)/Makefile
	cp $(DEB_DIR) $(TMP_DEB) -r
	make -C  $(TMP_DEB) all
	echo SUCCESS DEBIAN PACKAGE FILES ARE IN '$(TMP_DEB)'

#	mv $(ls $(TMP_DEB))	$(ls $(TMP_DEB) | sed s/"-"/"_"/ |  sed s/".tar."/".orig.tar."/)
#	rm -rf $(TMP_DEB)

ref_results: $(bin_PROGRAMS) $(TRAINED_CLASSIF) $(TRAINED_CLASSIF_PS)
	./test/stressTest.sh make

#check: $(bin_PROGRAMS) $(TRAINED_CLASSIF) $(TRAINED_CLASSIF_PS)
#	./test/stressTest.sh

cleanall: clean-local
	rm -f *.in *.m4 config.* configure *.log Makefile stamp-h1
	rm -rf build-aux config *.cache

# Tell versions [3.59,3.63) of GNU make to not export all variables.
# Otherwise a system limit (for SysV at least) may be exceeded.
.NOEXPORT: