File: ImageDatabaseServer.cxx

package info (click to toggle)
openigtlink 3.0.0-3
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid
  • size: 3,080 kB
  • sloc: cpp: 20,076; ansic: 6,704; sh: 227; perl: 74; makefile: 46
file content (386 lines) | stat: -rw-r--r-- 11,500 bytes parent folder | download
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
/*=========================================================================

  Program:   OpenIGTLink -- Example for Image Meta Data Server
  Language:  C++

  Copyright (c) Insight Software Consortium. All rights reserved.

  This software is distributed WITHOUT ANY WARRANTY; without even
  the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
  PURPOSE.  See the above copyright notices for more information.

=========================================================================*/


#include <iostream>
#include <math.h>
#include <cstdio>
#include <cstdlib>
#include <cstring>

#include "igtlOSUtil.h"
#include "igtlMessageHeader.h"
#include "igtlImageMessage.h"
#include "igtlImageMetaMessage.h"
#include "igtlLabelMetaMessage.h"
#include "igtlServerSocket.h"

int SendImageMeta(igtl::Socket::Pointer& socket, const char* name);
int SendLabelMeta(igtl::Socket::Pointer& socket, const char* name);
int SendImage(igtl::Socket::Pointer& socket, const char* name, const char* filedir);
int SendLabel(igtl::Socket::Pointer& socket, const char* name, const char* filedir);
int GetTestImage(igtl::ImageMessage::Pointer& msg, const char* dir, int i);

int main(int argc, char* argv[])
{

  //------------------------------------------------------------
  // Parse Arguments

  if (argc != 3) // check number of arguments
    {
    // If not correct, print usage
    std::cerr << "Usage: " << argv[0] << " <port>"    << std::endl;
    std::cerr << "    <port>     : Port # (18944 in Slicer default)"   << std::endl;
    std::cerr << "    <imgdir>   : file directory, where \"igtlTestImage[1-3].raw\" are placed." << std::endl;
    exit(0);
    }

  int    port     = atoi(argv[1]);
  char*  filedir  = argv[2];

  igtl::ServerSocket::Pointer serverSocket;
  serverSocket = igtl::ServerSocket::New();
  int r = serverSocket->CreateServer(port);

  if (r < 0)
    {
    std::cerr << "Cannot create a server socket." << std::endl;
    exit(0);
    }

  igtl::Socket::Pointer socket;
  
  while (1)
    {
    //------------------------------------------------------------
    // Waiting for Connection
    socket = serverSocket->WaitForConnection(1000);
    
    if (socket.IsNotNull()) // if client connected
      {
      std::cerr << "A client is connected." << std::endl;

      // Create a message buffer to receive header
      igtl::MessageHeader::Pointer headerMsg;
      headerMsg = igtl::MessageHeader::New();

      //------------------------------------------------------------
      // loop
      for (int i = 0; i < 100; i ++)
        {

        // Initialize receive buffer
        headerMsg->InitPack();

        // Receive generic header from the socket
        int rs = socket->Receive(headerMsg->GetPackPointer(), headerMsg->GetPackSize());
        if (rs == 0)
          {
          socket->CloseSocket();
          }
        if (rs != headerMsg->GetPackSize())
          {
          continue;
          }

        // Deserialize the header
        headerMsg->Unpack();

        std::cerr << "Receiving a message: " << std::endl;
        std::cerr << "    Device Type: \"" << headerMsg->GetDeviceType() << "\"" << std::endl;
        std::cerr << "    Device Name: \"" << headerMsg->GetDeviceName() << "\"" << std::endl;

        // Check data type and receive data body
        if (strcmp(headerMsg->GetDeviceType(), "GET_IMGMETA") == 0)
          {
          //socket->Skip(headerMsg->GetBodySizeToRead(), 0);
          SendImageMeta(socket, headerMsg->GetDeviceName());
          }
        else if (strcmp(headerMsg->GetDeviceType(), "GET_LBMETA") == 0)
          {
          SendLabelMeta(socket, headerMsg->GetDeviceName());
          }
        else if (strcmp(headerMsg->GetDeviceType(), "GET_IMAGE") == 0)
          {
          SendImage(socket, headerMsg->GetDeviceName(), filedir);
          }
        else
          {
          // if the data type is unknown, skip reading.
          socket->Skip(headerMsg->GetBodySizeToRead(), 0);
          }
        }
      }
    }
    
  //------------------------------------------------------------
  // Close connection (The example code never reaches to this section ...)
  
  socket->CloseSocket();

}


int SendImageMeta(igtl::Socket::Pointer& socket, const char* name)
{
  //------------------------------------------------------------
  // Allocate Status Message Class

  igtl::ImageMetaMessage::Pointer imgMetaMsg;
  imgMetaMsg = igtl::ImageMetaMessage::New();
  // NOTE: the server should send a message with the same device name
  // as the received query message.
  imgMetaMsg->SetDeviceName(name);

  //---------------------------
  // Create 1st meta data
  igtl::ImageMetaElement::Pointer imgMeta0;
  imgMeta0 = igtl::ImageMetaElement::New();
  imgMeta0->SetName("IMAGE_DESCRIPTION_0");
  imgMeta0->SetDeviceName("IMAGE_0");
  imgMeta0->SetModality("CT");
  imgMeta0->SetPatientName("PATIENT_0");
  imgMeta0->SetPatientID("PATIENT_ID_0");
  
  igtl::TimeStamp::Pointer ts0;
  ts0 = igtl::TimeStamp::New();
  ts0->SetTime(1291739370.2345);

  imgMeta0->SetTimeStamp(ts0);
  imgMeta0->SetSize(512, 512, 64);
  imgMeta0->SetScalarType(igtl::ImageMessage::TYPE_UINT16);

  //---------------------------
  // Create 2nd meta data
  igtl::ImageMetaElement::Pointer imgMeta1;
  imgMeta1 = igtl::ImageMetaElement::New();
  imgMeta1->SetName("IMAGE_DESCRIPTION_1");
  imgMeta1->SetDeviceName("IMAGE_1");
  imgMeta1->SetModality("MRI");
  imgMeta1->SetPatientName("PATIENT_1");
  imgMeta1->SetPatientID("PATIENT_ID_1");
  
  igtl::TimeStamp::Pointer ts1;
  ts1 = igtl::TimeStamp::New();
  ts1->SetTime(1291739380.3456);

  imgMeta1->SetTimeStamp(ts1);
  imgMeta1->SetSize(256, 128, 32);
  imgMeta1->SetScalarType(igtl::ImageMessage::TYPE_UINT16);

  //---------------------------
  // Create 3rd meta data
  igtl::ImageMetaElement::Pointer imgMeta2;
  imgMeta2 = igtl::ImageMetaElement::New();
  imgMeta2->SetName("IMAGE_DESCRIPTION_2");
  imgMeta2->SetDeviceName("IMAGE_2");
  imgMeta2->SetModality("PET");
  imgMeta2->SetPatientName("PATIENT_2");
  imgMeta2->SetPatientID("PATIENT_ID_2");
  
  igtl::TimeStamp::Pointer ts2;
  ts2 = igtl::TimeStamp::New();
  ts2->SetTime(1291739390.4567);

  imgMeta2->SetTimeStamp(ts2);
  imgMeta2->SetSize(256, 256, 32);
  imgMeta2->SetScalarType(igtl::ImageMessage::TYPE_UINT16);

  imgMetaMsg->AddImageMetaElement(imgMeta0);
  imgMetaMsg->AddImageMetaElement(imgMeta1);
  imgMetaMsg->AddImageMetaElement(imgMeta2);

  imgMetaMsg->Pack();
  std::cerr << "Size of pack: " << imgMetaMsg->GetPackSize() << std::endl;
  std::cerr << "Name of type: " << imgMetaMsg->GetDeviceType() << std::endl;
  std::cerr << "Sending a IMGMETA message..." << std::endl;

  socket->Send(imgMetaMsg->GetPackPointer(), imgMetaMsg->GetPackSize());

  return 1;

}


int SendLabelMeta(igtl::Socket::Pointer& socket, const char* name)
{
  //------------------------------------------------------------
  // Allocate Status Message Class

  igtl::LabelMetaMessage::Pointer lbMetaMsg;
  lbMetaMsg = igtl::LabelMetaMessage::New();
  // NOTE: the server should send a message with the same device name
  // as the received query message.
  lbMetaMsg->SetDeviceName(name);

  //---------------------------
  // Create 1st meta data
  igtl::LabelMetaElement::Pointer lbMeta0;
  lbMeta0 = igtl::LabelMetaElement::New();
  lbMeta0->SetName("LABEL_DESCRIPTION_0");
  lbMeta0->SetDeviceName("LABEL_0");
  lbMeta0->SetOwner("IMAGE_0");
  lbMeta0->SetSize(512, 512, 64);

  //---------------------------
  // Create 2nd meta data
  igtl::LabelMetaElement::Pointer lbMeta1;
  lbMeta1 = igtl::LabelMetaElement::New();
  lbMeta1->SetName("LABEL_DESCRIPTION_1");
  lbMeta1->SetDeviceName("LABEL_1");
  lbMeta1->SetOwner("IMAGE_1");
  
  lbMeta1->SetSize(256, 128, 32);

  //---------------------------
  // Create 3rd meta data
  igtl::LabelMetaElement::Pointer lbMeta2;
  lbMeta2 = igtl::LabelMetaElement::New();
  lbMeta2->SetName("LABEL_DESCRIPTION_2");
  lbMeta2->SetDeviceName("LABEL_2");
  lbMeta2->SetOwner("IMAGE_2");
  lbMeta2->SetSize(256, 256, 32);

  lbMetaMsg->AddLabelMetaElement(lbMeta0);
  lbMetaMsg->AddLabelMetaElement(lbMeta1);
  lbMetaMsg->AddLabelMetaElement(lbMeta2);

  lbMetaMsg->Pack();
  std::cerr << "Size of pack: " << lbMetaMsg->GetPackSize() << std::endl;
  std::cerr << "Name of type: " << lbMetaMsg->GetDeviceType() << std::endl;
  std::cerr << "Sending a LBMETA message..." << std::endl;

  socket->Send(lbMetaMsg->GetPackPointer(), lbMetaMsg->GetPackSize());

  return 1;

}



int SendImage(igtl::Socket::Pointer& socket, const char* name, const char* filedir)
{
  int index = 0;

  if (strcmp(name, "IMAGE_0") == 0)
    {
    index = 1;
    }
  else if (strcmp(name, "IMAGE_1") == 0)
    {
    index = 2;
    }
  else if (strcmp(name, "IMAGE_2") == 0)
    {
    index = 3;
    }
  if (strcmp(name, "LABEL_0") == 0)
    {
    index = 4;
    }
  else if (strcmp(name, "LABEL_1") == 0)
    {
    index = 5;
    }
  else if (strcmp(name, "LABEL_2") == 0)
    {
    index = 6;
    }

  if (index > 0)
    {
    int   size[]     = {256, 256, 1};       // image dimension
    float spacing[]  = {1.0, 1.0, 5.0};     // spacing (mm/pixel)
    int   svsize[]   = {256, 256, 1};       // sub-volume size
    int   svoffset[] = {0, 0, 0};           // sub-volume offset
    int   scalarType = igtl::ImageMessage::TYPE_UINT8;// scalar type
    
    igtl::ImageMessage::Pointer imgMsg = igtl::ImageMessage::New();
    imgMsg->SetDimensions(size);
    imgMsg->SetSpacing(spacing);
    imgMsg->SetScalarType(scalarType);
    imgMsg->SetDeviceName(name);
    imgMsg->SetSubVolume(svsize, svoffset);
    imgMsg->AllocateScalars();
    
    // Following line may be called in case of 16-, 32-, and 64-bit scalar types.
    // imgMsg->SetEndian(igtl::ImageMessage::ENDIAN_BIG);

    //------------------------------------------------------------
    // Set image data (See GetTestImage() bellow for the details)
    GetTestImage(imgMsg, filedir, index);
    
    igtl::Matrix4x4 matrix;
    igtl::IdentityMatrix(matrix);
    imgMsg->SetMatrix(matrix);
    
    //------------------------------------------------------------
    // Pack (serialize) and send
    imgMsg->Pack();
    socket->Send(imgMsg->GetPackPointer(), imgMsg->GetPackSize());
    }
  else
    {
    //------------------------------------------------------------
    // Return RTS_IMAGE message with error code

    // TODO

    }

  return 1;
}


//------------------------------------------------------------
// Function to read test image data
int GetTestImage(igtl::ImageMessage::Pointer& msg, const char* dir, int i)
{

  //------------------------------------------------------------
  // Check if image index is in the range
  if (i < 0 || i >= 7) 
    {
    std::cerr << "Image index is invalid." << std::endl;
    return 0;
    }

  //------------------------------------------------------------
  // Generate path to the raw image file
  char filename[128];
  sprintf(filename, "%s/igtlTestImage%d.raw", dir, i+1);
  std::cerr << "Reading " << filename << "...";

  //------------------------------------------------------------
  // Load raw data from the file
  FILE *fp = fopen(filename, "rb");
  if (fp == NULL)
    {
    std::cerr << "File opeining error: " << filename << std::endl;
    return 0;
    }
  int fsize = msg->GetImageSize();
  //size_t b = fread(msg->GetScalarPointer(), 1, fsize, fp);
  fread(msg->GetScalarPointer(), 1, fsize, fp);

  fclose(fp);

  std::cerr << "done." << std::endl;

  return 1;
}