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.. _app :
Application Layer
=================
Loaders and Setup
~~~~~~~~~~~~~~~~~
.. autosummary::
:toctree: generated/
:template: class.rst
{% for fileclass in fileclasses %}
~{{ fileclass }}
{% endfor %}
Representation and Manipulation
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
.. autosummary::
:toctree: generated/
:template: class.rst
~openmm.app.topology.Topology
~openmm.app.topology.Chain
~openmm.app.topology.Residue
~openmm.app.topology.Atom
~openmm.app.modeller.Modeller
Simulation
~~~~~~~~~~
.. autosummary::
:toctree: generated/
:template: class.rst
~openmm.app.forcefield.ForceField
~openmm.app.simulation.Simulation
Reporting Output
~~~~~~~~~~~~~~~~
.. autosummary::
:toctree: generated/
:template: class.rst
{% for reporter in reporters %}
~{{ reporter }}
{% endfor %}
Extras
~~~~~~
.. autosummary::
:toctree: generated/
:template: class.rst
{% for extra in app_extras %}
~{{ extra }}
{% endfor %}
Units
~~~~~~
.. autosummary::
:toctree: generated/
:template: class.rst
:nosignatures:
{% for unit in units %}
~{{ unit }}
{% endfor %}
|
