1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
|
/* -*- Mode: C; c-basic-offset:2 ; indent-tabs-mode:nil -*- */
/*
* Copyright (c) 2006 The Trustees of Indiana University and Indiana
* University Research and Technology
* Corporation. All rights reserved.
* Copyright (c) 2006 The Technical University of Chemnitz. All
* rights reserved.
*
* Author(s): Torsten Hoefler <htor@cs.indiana.edu>
*
* Copyright (c) 2012 Oracle and/or its affiliates. All rights reserved.
* Copyright (c) 2013-2015 Los Alamos National Security, LLC. All rights
* reserved.
* Copyright (c) 2014-2016 Research Organization for Information Science
* and Technology (RIST). All rights reserved.
*
*/
#include "nbc_internal.h"
/* an allgatherv schedule can not be cached easily because the contents
* ot the recvcounts array may change, so a comparison of the address
* would not be sufficient ... we simply do not cache it */
/* simple linear MPI_Iallgatherv
* the algorithm uses p-1 rounds
* first round:
* each node sends to it's left node (rank+1)%p sendcount elements
* each node begins with it's right node (rank-11)%p and receives from it recvcounts[(rank+1)%p] elements
* second round:
* each node sends to node (rank+2)%p sendcount elements
* each node receives from node (rank-2)%p recvcounts[(rank+2)%p] elements */
int ompi_coll_libnbc_iallgatherv(const void* sendbuf, int sendcount, MPI_Datatype sendtype, void* recvbuf, const int *recvcounts, const int *displs,
MPI_Datatype recvtype, struct ompi_communicator_t *comm, ompi_request_t ** request,
struct mca_coll_base_module_2_1_0_t *module)
{
int rank, p, res, speer, rpeer;
MPI_Aint rcvext;
NBC_Schedule *schedule;
char *rbuf, *sbuf, inplace;
NBC_Handle *handle;
ompi_coll_libnbc_module_t *libnbc_module = (ompi_coll_libnbc_module_t*) module;
NBC_IN_PLACE(sendbuf, recvbuf, inplace);
rank = ompi_comm_rank (comm);
p = ompi_comm_size (comm);
res = ompi_datatype_type_extent (recvtype, &rcvext);
if (OPAL_UNLIKELY(MPI_SUCCESS != res)) {
NBC_Error ("MPI Error in ompi_datatype_type_extent() (%i)", res);
return res;
}
if (inplace) {
sendtype = recvtype;
sendcount = recvcounts[rank];
} else {
/* copy my data to receive buffer */
rbuf = (char *) recvbuf + displs[rank] * rcvext;
res = NBC_Copy (sendbuf, sendcount, sendtype, rbuf, recvcounts[rank], recvtype, comm);
if (OPAL_UNLIKELY(OMPI_SUCCESS != res)) {
return res;
}
}
schedule = OBJ_NEW(NBC_Schedule);
if (NULL == schedule) {
return OMPI_ERR_OUT_OF_RESOURCE;
}
sbuf = (char *) recvbuf + displs[rank] * rcvext;
/* do p-1 rounds */
for (int r = 1 ; r < p ; ++r) {
speer = (rank + r) % p;
rpeer = (rank - r + p) % p;
rbuf = (char *)recvbuf + displs[rpeer] * rcvext;
res = NBC_Sched_recv (rbuf, false, recvcounts[rpeer], recvtype, rpeer, schedule, false);
if (OPAL_UNLIKELY(OMPI_SUCCESS != res)) {
OBJ_RELEASE(schedule);
return res;
}
/* send to rank r - not from the sendbuf to optimize MPI_IN_PLACE */
res = NBC_Sched_send (sbuf, false, recvcounts[rank], recvtype, speer, schedule, false);
if (OPAL_UNLIKELY(OMPI_SUCCESS != res)) {
OBJ_RELEASE(schedule);
return res;
}
}
res = NBC_Sched_commit (schedule);
if (OPAL_UNLIKELY(OMPI_SUCCESS != res)) {
OBJ_RELEASE(schedule);
return res;
}
res = NBC_Init_handle (comm, &handle, libnbc_module);
if (OPAL_UNLIKELY(OMPI_SUCCESS != res)) {
OBJ_RELEASE(schedule);
return res;
}
res = NBC_Start (handle, schedule);
if (OPAL_UNLIKELY(OMPI_SUCCESS != res)) {
NBC_Return_handle (handle);
return res;
}
*request = (ompi_request_t *) handle;
return OMPI_SUCCESS;
}
int ompi_coll_libnbc_iallgatherv_inter(const void* sendbuf, int sendcount, MPI_Datatype sendtype, void* recvbuf, const int *recvcounts, const int *displs,
MPI_Datatype recvtype, struct ompi_communicator_t *comm, ompi_request_t ** request,
struct mca_coll_base_module_2_1_0_t *module)
{
int res, rsize;
MPI_Aint rcvext;
NBC_Schedule *schedule;
NBC_Handle *handle;
ompi_coll_libnbc_module_t *libnbc_module = (ompi_coll_libnbc_module_t*) module;
rsize = ompi_comm_remote_size (comm);
res = ompi_datatype_type_extent(recvtype, &rcvext);
if (OPAL_UNLIKELY(MPI_SUCCESS != res)) {
NBC_Error ("MPI Error in ompi_datatype_type_extent() (%i)", res);
return res;
}
schedule = OBJ_NEW(NBC_Schedule);
if (NULL == schedule) {
return OMPI_ERR_OUT_OF_RESOURCE;
}
/* do rsize rounds */
for (int r = 0 ; r < rsize ; ++r) {
char *rbuf = (char *) recvbuf + displs[r] * rcvext;
if (recvcounts[r]) {
res = NBC_Sched_recv (rbuf, false, recvcounts[r], recvtype, r, schedule, false);
if (OPAL_UNLIKELY(OMPI_SUCCESS != res)) {
OBJ_RELEASE(schedule);
return res;
}
}
}
if (sendcount) {
for (int r = 0 ; r < rsize ; ++r) {
res = NBC_Sched_send (sendbuf, false, sendcount, sendtype, r, schedule, false);
if (OPAL_UNLIKELY(OMPI_SUCCESS != res)) {
OBJ_RELEASE(schedule);
return res;
}
}
}
res = NBC_Sched_commit (schedule);
if (OPAL_UNLIKELY(OMPI_SUCCESS != res)) {
OBJ_RELEASE(schedule);
return res;
}
res = NBC_Init_handle (comm, &handle, libnbc_module);
if (OPAL_UNLIKELY(OMPI_SUCCESS != res)) {
OBJ_RELEASE(schedule);
return res;
}
res = NBC_Start (handle, schedule);
if (OPAL_UNLIKELY(OMPI_SUCCESS != res)) {
NBC_Return_handle (handle);
return res;
}
*request = (ompi_request_t *) handle;
return OMPI_SUCCESS;
}
|
