1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223
|
/* -*- Mode: C; c-basic-offset:4 ; indent-tabs-mode:nil -*- */
/*
* Copyright (c) 2018 Siberian State University of Telecommunications
* and Information Science. All rights reserved.
* Copyright (c) 2018 Research Organization for Information Science
* and Technology (RIST). All rights reserved.
* $COPYRIGHT$
*
* Additional copyrights may follow
*
* $HEADER$
*/
#include "ompi_config.h"
#include "mpi.h"
#include "ompi/constants.h"
#include "ompi/datatype/ompi_datatype.h"
#include "ompi/communicator/communicator.h"
#include "ompi/mca/coll/coll.h"
#include "ompi/mca/coll/base/coll_base_functions.h"
#include "ompi/mca/coll/base/coll_tags.h"
#include "ompi/mca/coll/base/coll_base_util.h"
#include "ompi/mca/pml/pml.h"
#include "ompi/op/op.h"
/*
* ompi_coll_base_exscan_intra_linear
*
* Function: Linear algorithm for exclusive scan.
* Accepts: Same as MPI_Exscan
* Returns: MPI_SUCCESS or error code
*/
int
ompi_coll_base_exscan_intra_linear(const void *sbuf, void *rbuf, int count,
struct ompi_datatype_t *dtype,
struct ompi_op_t *op,
struct ompi_communicator_t *comm,
mca_coll_base_module_t *module)
{
int size, rank, err;
ptrdiff_t dsize, gap;
char *free_buffer = NULL;
char *reduce_buffer = NULL;
rank = ompi_comm_rank(comm);
size = ompi_comm_size(comm);
/* For MPI_IN_PLACE, just adjust send buffer to point to
* receive buffer. */
if (MPI_IN_PLACE == sbuf) {
sbuf = rbuf;
}
/* If we're rank 0, then just send our sbuf to the next rank, and
* we are done. */
if (0 == rank) {
return MCA_PML_CALL(send(sbuf, count, dtype, rank + 1,
MCA_COLL_BASE_TAG_EXSCAN,
MCA_PML_BASE_SEND_STANDARD, comm));
}
/* If we're the last rank, then just receive the result from the
* prior rank, and we are done. */
else if ((size - 1) == rank) {
return MCA_PML_CALL(recv(rbuf, count, dtype, rank - 1,
MCA_COLL_BASE_TAG_EXSCAN, comm,
MPI_STATUS_IGNORE));
}
/* Otherwise, get the result from the prior rank, combine it with my
* data, and send it to the next rank */
/* Get a temporary buffer to perform the reduction into. Rationale
* for malloc'ing this size is provided in coll_basic_reduce.c. */
dsize = opal_datatype_span(&dtype->super, count, &gap);
free_buffer = (char*)malloc(dsize);
if (NULL == free_buffer) {
return OMPI_ERR_OUT_OF_RESOURCE;
}
reduce_buffer = free_buffer - gap;
err = ompi_datatype_copy_content_same_ddt(dtype, count,
reduce_buffer, (char*)sbuf);
/* Receive the reduced value from the prior rank */
err = MCA_PML_CALL(recv(rbuf, count, dtype, rank - 1,
MCA_COLL_BASE_TAG_EXSCAN, comm, MPI_STATUS_IGNORE));
if (MPI_SUCCESS != err) {
goto error;
}
/* Now reduce the prior rank's result with my source buffer. The source
* buffer had been previously copied into the temporary reduce_buffer. */
ompi_op_reduce(op, rbuf, reduce_buffer, count, dtype);
/* Send my result off to the next rank */
err = MCA_PML_CALL(send(reduce_buffer, count, dtype, rank + 1,
MCA_COLL_BASE_TAG_EXSCAN,
MCA_PML_BASE_SEND_STANDARD, comm));
/* Error */
error:
free(free_buffer);
/* All done */
return err;
}
/*
* ompi_coll_base_exscan_intra_recursivedoubling
*
* Function: Recursive doubling algorithm for exclusive scan.
* Accepts: Same as MPI_Exscan
* Returns: MPI_SUCCESS or error code
*
* Description: Implements recursive doubling algorithm for MPI_Exscan.
* The algorithm preserves order of operations so it can
* be used both by commutative and non-commutative operations.
*
* Example for 5 processes and commutative operation MPI_SUM:
* Process: 0 1 2 3 4
* recvbuf: - - - - -
* psend: [0] [1] [2] [3] [4]
*
* Step 1:
* recvbuf: - [0] - [2] -
* psend: [1+0] [0+1] [3+2] [2+3] [4]
*
* Step 2:
* recvbuf: - [0] [1+0] [(0+1)+2] -
* psend: [(3+2)+(1+0)] [(2+3)+(0+1)] [(1+0)+(3+2)] [(1+0)+(2+3)] [4]
*
* Step 3:
* recvbuf: - [0] [1+0] [(0+1)+2] [(3+2)+(1+0)]
* psend: [4+((3+2)+(1+0))] [((3+2)+(1+0))+4]
*
* Time complexity (worst case): \ceil(\log_2(p))(2\alpha + 2m\beta + 2m\gamma)
* Memory requirements (per process): 2 * count * typesize = O(count)
* Limitations: intra-communicators only
*/
int ompi_coll_base_exscan_intra_recursivedoubling(
const void *sendbuf, void *recvbuf, int count, struct ompi_datatype_t *datatype,
struct ompi_op_t *op, struct ompi_communicator_t *comm,
mca_coll_base_module_t *module)
{
int err = MPI_SUCCESS;
char *tmpsend_raw = NULL, *tmprecv_raw = NULL;
int comm_size = ompi_comm_size(comm);
int rank = ompi_comm_rank(comm);
OPAL_OUTPUT((ompi_coll_base_framework.framework_output, "coll:base:exscan_intra_recursivedoubling: rank %d/%d",
rank, comm_size));
if (count == 0)
return MPI_SUCCESS;
if (comm_size < 2)
return MPI_SUCCESS;
ptrdiff_t dsize, gap;
dsize = opal_datatype_span(&datatype->super, count, &gap);
tmpsend_raw = malloc(dsize);
tmprecv_raw = malloc(dsize);
if (NULL == tmpsend_raw || NULL == tmprecv_raw) {
err = OMPI_ERR_OUT_OF_RESOURCE;
goto cleanup_and_return;
}
char *psend = tmpsend_raw - gap;
char *precv = tmprecv_raw - gap;
if (sendbuf != MPI_IN_PLACE) {
err = ompi_datatype_copy_content_same_ddt(datatype, count, psend, (char *)sendbuf);
if (MPI_SUCCESS != err) { goto cleanup_and_return; }
} else {
err = ompi_datatype_copy_content_same_ddt(datatype, count, psend, recvbuf);
if (MPI_SUCCESS != err) { goto cleanup_and_return; }
}
int is_commute = ompi_op_is_commute(op);
int is_first_block = 1;
for (int mask = 1; mask < comm_size; mask <<= 1) {
int remote = rank ^ mask;
if (remote < comm_size) {
err = ompi_coll_base_sendrecv(psend, count, datatype, remote,
MCA_COLL_BASE_TAG_EXSCAN,
precv, count, datatype, remote,
MCA_COLL_BASE_TAG_EXSCAN, comm,
MPI_STATUS_IGNORE, rank);
if (MPI_SUCCESS != err) { goto cleanup_and_return; }
if (rank > remote) {
/* Assertion: rank > 0 and rbuf is valid */
if (is_first_block) {
err = ompi_datatype_copy_content_same_ddt(datatype, count,
recvbuf, precv);
if (MPI_SUCCESS != err) { goto cleanup_and_return; }
is_first_block = 0;
} else {
/* Accumulate prefix reduction: recvbuf = precv <op> recvbuf */
ompi_op_reduce(op, precv, recvbuf, count, datatype);
}
/* Partial result: psend = precv <op> psend */
ompi_op_reduce(op, precv, psend, count, datatype);
} else {
if (is_commute) {
/* psend = precv <op> psend */
ompi_op_reduce(op, precv, psend, count, datatype);
} else {
/* precv = psend <op> precv */
ompi_op_reduce(op, psend, precv, count, datatype);
char *tmp = psend;
psend = precv;
precv = tmp;
}
}
}
}
cleanup_and_return:
if (NULL != tmpsend_raw)
free(tmpsend_raw);
if (NULL != tmprecv_raw)
free(tmprecv_raw);
return err;
}
|