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/*
* Copyright (C) by Argonne National Laboratory
* See COPYRIGHT in top-level directory
*/
#include "adio.h"
#include "adio_extern.h"
#include <unistd.h>
/* #define IO_DEBUG 1 */
void ADIOI_NOLOCK_WriteStrided(ADIO_File fd, const void *buf, int count,
MPI_Datatype datatype, int file_ptr_type,
ADIO_Offset offset, ADIO_Status * status, int
*error_code)
{
/* borrowed from old-school PVFS (v1) code. A driver for file systems that
* cannot or do not support client-side buffering
* Does not do data sieving optimization
* Does contain write-combining optimization for noncontig in memory, contig in
* file
*/
/* offset is in units of etype relative to the filetype. */
ADIOI_Flatlist_node *flat_buf, *flat_file;
int j, k, st_index = 0;
off_t err_lseek = -1;
ssize_t err = -1;
ADIO_Offset fwr_size = 0, bwr_size, new_bwr_size, new_fwr_size, i_offset, num;
ADIO_Offset bufsize, n_etypes_in_filetype;
ADIO_Offset n_filetypes, etype_in_filetype, size, sum;
ADIO_Offset abs_off_in_filetype = 0, size_in_filetype;
MPI_Count filetype_size, etype_size, buftype_size;
MPI_Aint lb, filetype_extent, buftype_extent, indx;
int buf_count, buftype_is_contig, filetype_is_contig;
ADIO_Offset off, disp;
int flag, err_flag = 0;
static char myname[] = "ADIOI_NOLOCK_WRITESTRIDED";
#ifdef IO_DEBUG
int rank, nprocs;
#endif
/* --BEGIN ERROR HANDLING-- */
if (fd->atomicity) {
*error_code = MPIO_Err_create_code(MPI_SUCCESS, MPIR_ERR_RECOVERABLE,
myname, __LINE__,
MPI_ERR_INTERN, "Atomic mode set in I/O function", 0);
return;
}
/* --END ERROR HANDLING-- */
ADIOI_Datatype_iscontig(datatype, &buftype_is_contig);
ADIOI_Datatype_iscontig(fd->filetype, &filetype_is_contig);
MPI_Type_size_x(fd->filetype, &filetype_size);
if (!filetype_size) {
#ifdef HAVE_STATUS_SET_BYTES
MPIR_Status_set_bytes(status, datatype, 0);
#endif
*error_code = MPI_SUCCESS;
return;
}
#ifdef IO_DEBUG
MPI_Comm_rank(fd->comm, &rank);
MPI_Comm_size(fd->comm, &nprocs);
#endif
MPI_Type_get_extent(fd->filetype, &lb, &filetype_extent);
MPI_Type_size_x(datatype, &buftype_size);
MPI_Type_get_extent(datatype, &lb, &buftype_extent);
etype_size = fd->etype_size;
ADIOI_Assert((buftype_size * count) ==
((ADIO_Offset) (unsigned) buftype_size * (ADIO_Offset) count));
bufsize = buftype_size * count;
if (!buftype_is_contig && filetype_is_contig) {
char *combine_buf, *combine_buf_ptr;
ADIO_Offset combine_buf_remain;
/* noncontiguous in memory, contiguous in file. use writev */
flat_buf = ADIOI_Flatten_and_find(datatype);
/* allocate our "combine buffer" to pack data into before writing */
combine_buf = (char *) ADIOI_Malloc(fd->hints->ind_wr_buffer_size);
combine_buf_ptr = combine_buf;
combine_buf_remain = fd->hints->ind_wr_buffer_size;
/* seek to the right spot in the file */
if (file_ptr_type == ADIO_EXPLICIT_OFFSET) {
off = fd->disp + etype_size * offset;
lseek(fd->fd_sys, off, SEEK_SET);
} else
off = lseek(fd->fd_sys, fd->fp_ind, SEEK_SET);
/* loop through all the flattened pieces. combine into buffer until
* no more will fit, then write.
*
* special case of a given piece being bigger than the combine buffer
* is also handled.
*/
for (j = 0; j < count; j++) {
int i;
for (i = 0; i < flat_buf->count; i++) {
if (flat_buf->blocklens[i] > combine_buf_remain && combine_buf != combine_buf_ptr) {
/* there is data in the buffer; write out the buffer so far */
#ifdef IO_DEBUG
printf("[%d/%d] nc mem c file (0) writing loc = %Ld sz = %Ld\n",
rank, nprocs, off, fd->hints->ind_wr_buffer_size - combine_buf_remain);
#endif
#ifdef ADIOI_MPE_LOGGING
MPE_Log_event(ADIOI_MPE_write_a, 0, NULL);
#endif
err = write(fd->fd_sys,
combine_buf, fd->hints->ind_wr_buffer_size - combine_buf_remain);
#ifdef ADIOI_MPE_LOGGING
MPE_Log_event(ADIOI_MPE_write_b, 0, NULL);
#endif
if (err == -1)
err_flag = 1;
/* reset our buffer info */
combine_buf_ptr = combine_buf;
combine_buf_remain = fd->hints->ind_wr_buffer_size;
}
/* TODO: heuristic for when to not bother to use combine buffer? */
if (flat_buf->blocklens[i] >= combine_buf_remain) {
/* special case: blocklen is as big as or bigger than the combine buf;
* write directly
*/
#ifdef IO_DEBUG
printf("[%d/%d] nc mem c file (1) writing loc = %Ld sz = %d\n",
rank, nprocs, off, flat_buf->blocklens[i]);
#endif
ADIOI_Assert(flat_buf->blocklens[i] == (unsigned) flat_buf->blocklens[i]);
ADIOI_Assert((((ADIO_Offset) (uintptr_t) buf) +
(ADIO_Offset) j * (ADIO_Offset) buftype_extent +
flat_buf->indices[i]) ==
(ADIO_Offset) ((uintptr_t) buf +
(ADIO_Offset) j * (ADIO_Offset) buftype_extent +
flat_buf->indices[i]));
#ifdef ADIOI_MPE_LOGGING
MPE_Log_event(ADIOI_MPE_write_a, 0, NULL);
#endif
err = write(fd->fd_sys,
((char *) buf) + (ADIO_Offset) j * (ADIO_Offset) buftype_extent +
flat_buf->indices[i], (unsigned) flat_buf->blocklens[i]);
#ifdef ADIOI_MPE_LOGGING
MPE_Log_event(ADIOI_MPE_write_b, 0, NULL);
#endif
if (err == -1)
err_flag = 1;
off += flat_buf->blocklens[i]; /* keep up with the final file offset too */
} else {
/* copy more data into combine buffer */
memcpy(combine_buf_ptr,
((char *) buf) + j * buftype_extent + flat_buf->indices[i],
flat_buf->blocklens[i]);
combine_buf_ptr += flat_buf->blocklens[i];
combine_buf_remain -= flat_buf->blocklens[i];
off += flat_buf->blocklens[i]; /* keep up with the final file offset too */
}
}
}
if (combine_buf_ptr != combine_buf) {
/* data left in buffer to write */
#ifdef IO_DEBUG
printf("[%d/%d] nc mem c file (2) writing loc = %Ld sz = %Ld\n",
rank, nprocs, off, fd->hints->ind_wr_buffer_size - combine_buf_remain);
#endif
#ifdef ADIOI_MPE_LOGGING
MPE_Log_event(ADIOI_MPE_write_a, 0, NULL);
#endif
err = write(fd->fd_sys,
combine_buf, fd->hints->ind_wr_buffer_size - combine_buf_remain);
#ifdef ADIOI_MPE_LOGGING
MPE_Log_event(ADIOI_MPE_write_b, 0, NULL);
#endif
if (err == -1)
err_flag = 1;
}
if (file_ptr_type == ADIO_INDIVIDUAL)
fd->fp_ind = off;
ADIOI_Free(combine_buf);
if (err_flag) {
*error_code = MPIO_Err_create_code(MPI_SUCCESS,
MPIR_ERR_RECOVERABLE, myname,
__LINE__, MPI_ERR_IO, "**io",
"**io %s", strerror(errno));
} else
*error_code = MPI_SUCCESS;
}
/* if (!buftype_is_contig && filetype_is_contig) ... */
else { /* noncontiguous in file */
/* split up into several contiguous writes */
/* find starting location in the file */
flat_file = ADIOI_Flatten_and_find(fd->filetype);
disp = fd->disp;
if (file_ptr_type == ADIO_INDIVIDUAL) {
offset = fd->fp_ind; /* in bytes */
n_filetypes = -1;
flag = 0;
while (!flag) {
int i;
n_filetypes++;
for (i = 0; i < flat_file->count; i++) {
if (disp + flat_file->indices[i] +
n_filetypes * (ADIO_Offset) filetype_extent + flat_file->blocklens[i]
>= offset) {
st_index = i;
fwr_size = disp + flat_file->indices[i] +
n_filetypes * (ADIO_Offset) filetype_extent
+ flat_file->blocklens[i] - offset;
flag = 1;
break;
}
}
}
} else {
int i;
n_etypes_in_filetype = filetype_size / etype_size;
n_filetypes = offset / n_etypes_in_filetype;
etype_in_filetype = offset % n_etypes_in_filetype;
size_in_filetype = etype_in_filetype * etype_size;
sum = 0;
for (i = 0; i < flat_file->count; i++) {
sum += flat_file->blocklens[i];
if (sum > size_in_filetype) {
st_index = i;
fwr_size = sum - size_in_filetype;
abs_off_in_filetype = flat_file->indices[i] +
size_in_filetype - (sum - flat_file->blocklens[i]);
break;
}
}
/* abs. offset in bytes in the file */
offset = disp + n_filetypes * (ADIO_Offset) filetype_extent + abs_off_in_filetype;
}
if (buftype_is_contig && !filetype_is_contig) {
/* contiguous in memory, noncontiguous in file. should be the most
common case. */
i_offset = 0;
j = st_index;
off = offset;
fwr_size = MPL_MIN(fwr_size, bufsize);
while (i_offset < bufsize) {
if (fwr_size) {
/* TYPE_UB and TYPE_LB can result in
* fwr_size = 0. save system call in such cases */
#ifdef ADIOI_MPE_LOGGING
MPE_Log_event(ADIOI_MPE_lseek_a, 0, NULL);
#endif
#ifdef IO_DEBUG
printf("[%d/%d] c mem nc file writing loc = %Ld sz = %d\n",
rank, nprocs, off, fwr_size);
#endif
err_lseek = lseek(fd->fd_sys, off, SEEK_SET);
#ifdef ADIOI_MPE_LOGGING
MPE_Log_event(ADIOI_MPE_lseek_b, 0, NULL);
#endif
if (err_lseek == -1)
err_flag = 1;
#ifdef ADIOI_MPE_LOGGING
MPE_Log_event(ADIOI_MPE_write_a, 0, NULL);
#endif
err = write(fd->fd_sys, ((char *) buf) + i_offset, fwr_size);
#ifdef ADIOI_MPE_LOGGING
MPE_Log_event(ADIOI_MPE_write_b, 0, NULL);
#endif
if (err == -1)
err_flag = 1;
}
i_offset += fwr_size;
if (off + fwr_size < disp + flat_file->indices[j] +
flat_file->blocklens[j] + n_filetypes * (ADIO_Offset) filetype_extent)
off += fwr_size;
/* did not reach end of contiguous block in filetype.
* no more I/O needed. off is incremented by fwr_size. */
else {
if (j < (flat_file->count - 1))
j++;
else {
j = 0;
n_filetypes++;
}
off = disp + flat_file->indices[j] +
n_filetypes * (ADIO_Offset) filetype_extent;
fwr_size = MPL_MIN(flat_file->blocklens[j], bufsize - i_offset);
}
}
} else {
/* noncontiguous in memory as well as in file */
flat_buf = ADIOI_Flatten_and_find(datatype);
k = num = buf_count = 0;
indx = flat_buf->indices[0];
j = st_index;
off = offset;
bwr_size = flat_buf->blocklens[0];
while (num < bufsize) {
size = MPL_MIN(fwr_size, bwr_size);
if (size) {
#ifdef IO_DEBUG
printf("[%d/%d] nc mem nc file writing loc = %Ld sz = %d\n",
rank, nprocs, off, size);
#endif
#ifdef ADIOI_MPE_LOGGING
MPE_Log_event(ADIOI_MPE_lseek_a, 0, NULL);
#endif
lseek(fd->fd_sys, off, SEEK_SET);
#ifdef ADIOI_MPE_LOGGING
MPE_Log_event(ADIOI_MPE_lseek_b, 0, NULL);
#endif
if (err == -1)
err_flag = 1;
#ifdef ADIOI_MPE_LOGGING
MPE_Log_event(ADIOI_MPE_write_a, 0, NULL);
#endif
ADIOI_Assert(size == (size_t) size);
ADIOI_Assert(off == (off_t) off);
err = write(fd->fd_sys, ((char *) buf) + indx, size);
#ifdef ADIOI_MPE_LOGGING
MPE_Log_event(ADIOI_MPE_write_b, 0, NULL);
#endif
if (err == -1)
err_flag = 1;
}
new_fwr_size = fwr_size;
new_bwr_size = bwr_size;
if (size == fwr_size) {
/* reached end of contiguous block in file */
if (j < (flat_file->count - 1))
j++;
else {
j = 0;
n_filetypes++;
}
off = disp + flat_file->indices[j] +
n_filetypes * (ADIO_Offset) filetype_extent;
new_fwr_size = flat_file->blocklens[j];
if (size != bwr_size) {
indx += size;
new_bwr_size -= size;
}
}
if (size == bwr_size) {
/* reached end of contiguous block in memory */
k = (k + 1) % flat_buf->count;
buf_count++;
indx = buftype_extent * (buf_count / flat_buf->count) + flat_buf->indices[k];
new_bwr_size = flat_buf->blocklens[k];
if (size != fwr_size) {
off += size;
new_fwr_size -= size;
}
}
num += size;
fwr_size = new_fwr_size;
bwr_size = new_bwr_size;
}
}
if (file_ptr_type == ADIO_INDIVIDUAL)
fd->fp_ind = off;
if (err_flag) {
*error_code = MPIO_Err_create_code(MPI_SUCCESS,
MPIR_ERR_RECOVERABLE, myname,
__LINE__, MPI_ERR_IO, "**io",
"**io %s", strerror(errno));
} else
*error_code = MPI_SUCCESS;
}
fd->fp_sys_posn = -1; /* set it to null. */
#ifdef HAVE_STATUS_SET_BYTES
MPIR_Status_set_bytes(status, datatype, bufsize);
/* This is a temporary way of filling in status. The right way is to
keep track of how much data was actually written by ADIOI_BUFFERED_WRITE. */
#endif
}
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