File: ddt_lib.c

package info (click to toggle)
openmpi 5.0.8-4
  • links: PTS, VCS
  • area: main
  • in suites:
  • size: 201,684 kB
  • sloc: ansic: 613,078; makefile: 42,353; sh: 11,194; javascript: 9,244; f90: 7,052; java: 6,404; perl: 5,179; python: 1,859; lex: 740; fortran: 61; cpp: 20; tcl: 12
file content (457 lines) | stat: -rw-r--r-- 14,114 bytes parent folder | download | duplicates (7)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
/* -*- Mode: C; c-basic-offset:4 ; -*- */
/*
 * Copyright (c) 2004-2006 The Trustees of Indiana University and Indiana
 *                         University Research and Technology
 *                         Corporation.  All rights reserved.
 * Copyright (c) 2004-2014 The University of Tennessee and The University
 *                         of Tennessee Research Foundation.  All rights
 *                         reserved.
 * Copyright (c) 2004-2006 High Performance Computing Center Stuttgart,
 *                         University of Stuttgart.  All rights reserved.
 * Copyright (c) 2004-2006 The Regents of the University of California.
 *                         All rights reserved.
 * Copyright (c) 2006      Sun Microsystems Inc. All rights reserved.
 * Copyright (c) 2009      Oak Ridge National Labs.  All rights reserved.
 * Copyright (c) 2018      Los Alamos National Security, LLC. All rights
 *                         reserved.
 * $COPYRIGHT$
 *
 * Additional copyrights may follow
 *
 * $HEADER$
 */

#include "ompi_config.h"
#include "ddt_lib.h"
#include "ompi/constants.h"
#include <time.h>
#include <stdlib.h>
#ifdef HAVE_SYS_TIME_H
#include <sys/time.h>
#endif
#include <stdio.h>
#include <string.h>

#define TIMER_DATA_TYPE struct timeval
#define GET_TIME(TV)   gettimeofday( &(TV), NULL )
#define ELAPSED_TIME(TSTART, TEND)  (((TEND).tv_sec - (TSTART).tv_sec) * 1000000 + ((TEND).tv_usec - (TSTART).tv_usec))

#define DUMP_DATA_AFTER_COMMIT 0x00000001
#define CHECK_PACK_UNPACK      0x00000002
#define VALIDATE_DATA          0x00000004
uint32_t outputFlags = CHECK_PACK_UNPACK | VALIDATE_DATA;

/**
 * Cache cleanup.
 */
#define CACHE_SIZE (4*1024*1024)
void cache_trash( void )
{
    char* buffer;

    buffer = (char*)malloc( sizeof(char) * CACHE_SIZE );
    memset( buffer, 1, CACHE_SIZE );
    memset( buffer, 0xff, CACHE_SIZE );
    free( buffer );
}

/**
 * Data-type functions.
 */
ompi_datatype_t* create_inversed_vector( const ompi_datatype_t* type, int length )
{
   ompi_datatype_t* type1;

   ompi_datatype_create_vector( length, 1, 2, type, &type1 );

   ompi_datatype_commit( &type1 );
   return type1;
}

void print_double_mat( unsigned int N, double* mat )
{
   unsigned int i, j;
   double* pMat;

   for( i = 0; i < N; i++ ) {
      printf( "(%4d) :", i * N * (int)sizeof(double) );
      pMat = mat + i * N;
      for( j = 0; j < N; j++ ) {
         printf( "%5.1f ", *pMat );
         pMat++;
      }
      printf( "\n" );
   }
}

int init_random_upper_matrix( unsigned int N, double* mat )
{
    unsigned int i, j;

    srand( time(NULL) );
    for( i = 0; i < N; i++ ) {
        mat += i;
        for( j = i; j < N; j++ ) {
            *mat = (double)random();
            mat++;
        }
    }
    return OMPI_SUCCESS;
}

int check_diag_matrix( unsigned int N, double* mat1, double* mat2 )
{
   unsigned int i, j;

   for( i = 0; i < N; i++ ) {
      mat1 += i;
      mat2 += i;
      for( j = i; j < N; j++ ) {
         if( *mat1 != *mat2 ) {
            printf( "error in position (%d, %d) expect %f and find %f\n",
                    i, j, *mat1, *mat2 );
            printf( "hex %lx != %lx\n", *(long*)mat1, *(long*)mat2 );
            return OMPI_ERROR;
         }
         mat1++; mat2++;
      }
   }
   return OMPI_SUCCESS;
}

ompi_datatype_t* upper_matrix( unsigned int mat_size )
{
    int *disp, *blocklen;
    unsigned int i;
    ompi_datatype_t* upper;

    disp = (int*)malloc( sizeof(int) * mat_size );
    blocklen = (int*)malloc( sizeof(int) * mat_size );

    for( i = 0; i < mat_size; i++ ) {
        disp[i] = i * mat_size + i;
        blocklen[i] = mat_size - i;
    }

    ompi_datatype_create_indexed( mat_size, blocklen, disp, &ompi_mpi_double.dt,
                             &upper );
    ompi_datatype_commit( &upper );
    if( outputFlags & DUMP_DATA_AFTER_COMMIT ) {
        ompi_datatype_dump( upper );
    }
    free( disp );
    free( blocklen );
    return upper;
}

ompi_datatype_t* lower_matrix( unsigned int mat_size )
{
    int *disp, *blocklen;
    unsigned int i;
    ompi_datatype_t* upper;

    disp = (int*)malloc( sizeof(int) * mat_size );
    blocklen = (int*)malloc( sizeof(int) * mat_size );

    for( i = 0; i < mat_size; i++ ) {
        disp[i] = i * mat_size;
        blocklen[i] = i;
    }

    ompi_datatype_create_indexed( mat_size, blocklen, disp, &ompi_mpi_double.dt,
                             &upper );
    free( disp );
    free( blocklen );
    return upper;
}

ompi_datatype_t* test_matrix_borders( unsigned int size, unsigned int width )
{
   ompi_datatype_t *pdt, *pdt_line;
   int disp[2];
   int blocklen[2];

   disp[0] = 0;
   blocklen[0] = width;
   disp[1] = (size - width) * sizeof(double);
   blocklen[1] = width;

   ompi_datatype_create_indexed( 2, blocklen, disp, &ompi_mpi_double.dt,
                            &pdt_line );
   ompi_datatype_create_contiguous( size, pdt_line, &pdt );
   OBJ_RELEASE( pdt_line ); /*assert( pdt_line == NULL );*/
   return pdt;
}

ompi_datatype_t* test_contiguous( void )
{
    ompi_datatype_t *pdt, *pdt1, *pdt2;

    printf( "test contiguous (alignment)\n" );
    ompi_datatype_create_contiguous(0, &ompi_mpi_datatype_null.dt, &pdt1);
    ompi_datatype_add( pdt1, &ompi_mpi_double.dt, 1, 0, -1 );
    if( outputFlags & DUMP_DATA_AFTER_COMMIT ) {
        ompi_datatype_dump( pdt1 );
    }
    ompi_datatype_add( pdt1, &ompi_mpi_char.dt, 1, 8, -1 );
    if( outputFlags & DUMP_DATA_AFTER_COMMIT ) {
        ompi_datatype_dump( pdt1 );
    }
    ompi_datatype_create_contiguous( 4, pdt1, &pdt2 );
    OBJ_RELEASE( pdt1 ); /*assert( pdt1 == NULL );*/
    if( outputFlags & DUMP_DATA_AFTER_COMMIT ) {
        ompi_datatype_dump( pdt2 );
    }
    ompi_datatype_create_contiguous( 2, pdt2, &pdt );
    OBJ_RELEASE( pdt2 ); /*assert( pdt2 == NULL );*/
    if( outputFlags & DUMP_DATA_AFTER_COMMIT ) {
        ompi_datatype_dump( pdt );
    }
    return pdt;
}

typedef struct __struct_char_double {
    char c;
    double d;
} char_double_t;

ompi_datatype_t* test_struct_char_double( void )
{
    char_double_t data;
    int lengths[] = {1, 1};
    MPI_Aint displ[] = {0, 0};
    ompi_datatype_t *pdt;
    ompi_datatype_t* types[] = { &ompi_mpi_char.dt, &ompi_mpi_double.dt};

    displ[0] = (char*)&(data.c) - (char*)&(data);
    displ[1] = (char*)&(data.d) - (char*)&(data);

    ompi_datatype_create_struct( 2, lengths, displ, types, &pdt );
    ompi_datatype_commit( &pdt );
    if( outputFlags & DUMP_DATA_AFTER_COMMIT ) {
        ompi_datatype_dump( pdt );
    }
    return pdt;
}

ompi_datatype_t* test_create_twice_two_doubles( void )
{
    ompi_datatype_t* pdt;

    ompi_datatype_create_vector( 2, 2, 5, &ompi_mpi_double.dt, &pdt );
    ompi_datatype_commit( &pdt );
    if( outputFlags & DUMP_DATA_AFTER_COMMIT ) {
        ompi_datatype_dump( pdt );
    }
    return pdt;
}

/*
  Datatype 0x832cf28 size 0 align 1 id 0 length 4 used 0
  true_lb 0 true_ub 0 (true_extent 0) lb 0 ub 0 (extent 0)
  nbElems 0 loops 0 flags 6 (committed contiguous )-cC--------[---][---]
  contain 13 disp 0x420 (1056) extent 4
  --C-----D*-[ C ][INT]        MPI_INT count 13 disp 0x478 (1144) extent 4
  --C-----D*-[ C ][INT]        MPI_INT count 13 disp 0x4d0 (1232) extent 4
  --C-----D*-[ C ][INT]        MPI_INT count 13 disp 0x528 (1320) extent 4
  --C-----D*-[ C ][INT]        MPI_INT count 13 disp 0x580 (1408) extent 4
  --C-----D*-[ C ][INT]        MPI_INT count 13 disp 0x5d8 (1496) extent 4
  --C-----D*-[ C ][INT]        MPI_INT count 13 disp 0x630 (1584) extent 4
  --C-----D*-[ C ][INT]        MPI_INT count 12 disp 0x68c (1676) extent 4
  --C-----D*-[ C ][INT]        MPI_INT count 11 disp 0x6e8 (1768) extent 4
  --C-----D*-[ C ][INT]        MPI_INT count 10 disp 0x744 (1860) extent 4
  --C-----D*-[ C ][INT]        MPI_INT count 9 disp 0x7a0 (1952) extent 4
  --C-----D*-[ C ][INT]        MPI_INT count 8 disp 0x7fc (2044) extent 4
  --C-----D*-[ C ][INT]        MPI_INT count 7 disp 0x858 (2136) extent 4
  --C-----D*-[ C ][INT]        MPI_INT count 6 disp 0x8b4 (2228) extent 4
  --C-----D*-[ C ][INT]        MPI_INT count 5 disp 0x910 (2320) extent 4
  --C-----D*-[ C ][INT]        MPI_INT count 4 disp 0x96c (2412) extent 4
  --C-----D*-[ C ][INT]        MPI_INT count 3 disp 0x9c8 (2504) extent 4
  --C-----D*-[ C ][INT]        MPI_INT count 2 disp 0xa24 (2596) extent 4
  --C-----D*-[ C ][INT]        MPI_INT count 1 disp 0xa80 (2688) extent 4
*/
static int blacs_length[] = { 13, 13, 13, 13, 13, 13, 12, 11, 10, 9, 8, 7, 6, 5, 4, 3, 2, 1 };
static int blacs_indices[] = { 1144/4, 1232/4, 1320/4, 1408/4, 1496/4, 1584/4, 1676/4, 1768/4,
                               1860/4, 1952/4, 2044/4, 2136/4, 2228/4, 2320/4, 2412/4, 2504/4,
                               2596/4, 2688/4 };
ompi_datatype_t* test_create_blacs_type( void )
{
    ompi_datatype_t *pdt;

    ompi_datatype_create_indexed( 18, blacs_length, blacs_indices, &ompi_mpi_int.dt, &pdt );
    ompi_datatype_commit( &pdt );
    if( outputFlags & DUMP_DATA_AFTER_COMMIT ) {
        ompi_datatype_dump( pdt );
    }
    return pdt;
}

ompi_datatype_t* test_create_blacs_type1( const ompi_datatype_t* base_type )
{
    ompi_datatype_t *pdt;

    ompi_datatype_create_vector( 7, 1, 3, base_type, &pdt );
    ompi_datatype_commit( &pdt );
    if( outputFlags & DUMP_DATA_AFTER_COMMIT ) {
        ompi_datatype_dump( pdt );
    }
    return pdt;
}

ompi_datatype_t* test_create_blacs_type2( const ompi_datatype_t* base_type )
{
    ompi_datatype_t *pdt;

    ompi_datatype_create_vector( 7, 1, 2, base_type, &pdt );
    ompi_datatype_commit( &pdt );
    if( outputFlags & DUMP_DATA_AFTER_COMMIT ) {
        ompi_datatype_dump( pdt );
    }
    return pdt;
}

ompi_datatype_t* test_struct( void )
{
    ompi_datatype_t* types[] = { &ompi_mpi_float.dt  /* ompi_datatype_basicDatatypes[DT_FLOAT] */,
                                 NULL,
                                 &ompi_mpi_char.dt  /* ompi_datatype_basicDatatypes[DT_CHAR] */ };
    int lengths[] = { 2, 1, 3 };
    MPI_Aint disp[] = { 0, 16, 26 };
    ompi_datatype_t* pdt, *pdt1;

    printf( "test struct\n" );
    ompi_datatype_create_contiguous(0, &ompi_mpi_datatype_null.dt, &pdt1);
    ompi_datatype_add( pdt1, &ompi_mpi_double.dt, 1, 0, -1 );
    ompi_datatype_add( pdt1, &ompi_mpi_char.dt, 1, 8, -1 );
    if( outputFlags & DUMP_DATA_AFTER_COMMIT ) {
        ompi_datatype_dump( pdt1 );
    }

    types[1] = pdt1;

    ompi_datatype_create_struct( 3, lengths, disp, types, &pdt );
    OBJ_RELEASE( pdt1 ); /*assert( pdt1 == NULL );*/
    if( outputFlags & DUMP_DATA_AFTER_COMMIT ) {
        ompi_datatype_dump( pdt );
    }
    return pdt;
}

/* Create a non-contiguous resized datatype */
struct structure {
    double not_transfered;
    double transfered_1;
    double transfered_2;
};

ompi_datatype_t* create_struct_constant_gap_resized_ddt( ompi_datatype_t* type )
{
    struct structure data[1];
    ompi_datatype_t *struct_type, *temp_type;
    ompi_datatype_t *types[2] = {type, type};
    int blocklens[2] = {1, 1};
    MPI_Aint disps[3];

    MPI_Get_address(&data[0].transfered_1, &disps[0]);
    MPI_Get_address(&data[0].transfered_2, &disps[1]);
    MPI_Get_address(&data[0], &disps[2]);
    disps[1] -= disps[2]; /*  8 */
    disps[0] -= disps[2]; /* 16 */

    ompi_datatype_create_struct(2, blocklens, disps, types, &temp_type);
    ompi_datatype_create_resized(temp_type, 0, sizeof(data[0]), &struct_type);
    ompi_datatype_commit(&struct_type);
    OBJ_RELEASE(temp_type); assert( temp_type == NULL );
    if( outputFlags & DUMP_DATA_AFTER_COMMIT ) {
        ompi_datatype_dump( struct_type );
    }

    return struct_type;
}

typedef struct {
    int i1;
    int gap;
    int i2;
} sdata_intern;

typedef struct {
    int counter;
    sdata_intern v[10];
    int last;
} sstrange;

#define SSTRANGE_CNT 10
#define USE_RESIZED

ompi_datatype_t* create_strange_dt( void )
{
    sdata_intern v[2];
    MPI_Aint displ[3];
    ompi_datatype_t* types[3] = { &ompi_mpi_int.dt };
    sstrange t[2];
    int pBlock[3] = {1, 10, 1}, dispi[3];
    ompi_datatype_t *pdt, *pdt1, *pdt2, *pdtTemp;

    dispi[0] = (int)((char*)&(v[0].i1) - (char*)&(v[0]));  /* 0 */
    dispi[1] = (int)(((char*)(&(v[0].i2)) - (char*)&(v[0])) / sizeof(int));  /* 2 */
    ompi_datatype_create_indexed_block( 2, 1, dispi, &ompi_mpi_int.dt, &pdtTemp );
#ifdef USE_RESIZED
    /* optional */
    displ[0] = 0;
    displ[1] = (char*)&(v[1]) - (char*)&(v[0]);
    ompi_datatype_create_resized( pdtTemp, displ[0], displ[1], &pdt1 );
    OBJ_RELEASE( pdtTemp ); assert( pdtTemp == NULL );
#else
    pdt1 = pdtTemp;
#endif  /* USE_RESIZED */

    types[1] = pdt1;
    types[2] = &ompi_mpi_int.dt;
    displ[0] = 0;
    displ[1] = (long)((char*)&(t[0].v[0]) - (char*)&(t[0]));
    displ[2] = (long)((char*)&(t[0].last) - (char*)&(t[0]));
    ompi_datatype_create_struct( 3, pBlock, displ, types, &pdtTemp );
#ifdef USE_RESIZED
    /* optional */
    displ[1] = (char*)&(t[1]) - (char*)&(t[0]);
    ompi_datatype_create_resized( pdtTemp, displ[0], displ[1], &pdt2 );
    OBJ_RELEASE( pdtTemp ); assert( pdtTemp == NULL );
#else
    pdt2 = pdtTemp;
#endif  /* USE_RESIZED */

    ompi_datatype_create_contiguous( SSTRANGE_CNT, pdt2, &pdt );

    OBJ_RELEASE( pdt1 );
    OBJ_RELEASE( pdt2 );
    printf( "\nStrange datatype BEFORE COMMIT\n" );
    if( outputFlags & DUMP_DATA_AFTER_COMMIT ) {
        ompi_datatype_dump( pdt );
    }
    ompi_datatype_commit( &pdt );
    printf( "\nStrange datatype AFTER COMMIT\n" );
    if( outputFlags & DUMP_DATA_AFTER_COMMIT ) {
        ompi_datatype_dump( pdt );
    }
    return pdt;
}

ompi_datatype_t* create_contiguous_type( const ompi_datatype_t* data, int count )
{
    ompi_datatype_t* contiguous;

    ompi_datatype_create_contiguous( count, data, &contiguous );
    ompi_datatype_commit( &contiguous );
    return contiguous;
}

ompi_datatype_t* create_vector_type( const ompi_datatype_t* data, int count, int length, int stride )
{
    ompi_datatype_t* vector;

    ompi_datatype_create_vector( count, length, stride, data, &vector );
    ompi_datatype_commit( &vector );
    return vector;
}