File: lost-output.html

package info (click to toggle)
openmpi 5.0.8-8
  • links: PTS, VCS
  • area: main
  • in suites:
  • size: 201,692 kB
  • sloc: ansic: 613,078; makefile: 42,350; sh: 11,194; javascript: 9,244; f90: 7,052; java: 6,404; perl: 5,179; python: 1,859; lex: 740; fortran: 61; cpp: 20; tcl: 12
file content (169 lines) | stat: -rw-r--r-- 10,091 bytes parent folder | download | duplicates (2)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
<!DOCTYPE html>
<html class="writer-html5" lang="en">
<head>
  <meta charset="utf-8" />
  <meta name="viewport" content="width=device-width, initial-scale=1.0" />
  <title>12.5. Application Output Lost with Abnormal Termination &mdash; Open MPI 5.0.8 documentation</title>
      <link rel="stylesheet" type="text/css" href="../_static/pygments.css" />
      <link rel="stylesheet" type="text/css" href="../_static/css/theme.css" />

  
  <!--[if lt IE 9]>
    <script src="../_static/js/html5shiv.min.js"></script>
  <![endif]-->
  
        <script data-url_root="../" id="documentation_options" src="../_static/documentation_options.js"></script>
        <script src="../_static/jquery.js"></script>
        <script src="../_static/underscore.js"></script>
        <script src="../_static/_sphinx_javascript_frameworks_compat.js"></script>
        <script src="../_static/doctools.js"></script>
        <script src="../_static/sphinx_highlight.js"></script>
    <script src="../_static/js/theme.js"></script>
    <link rel="index" title="Index" href="../genindex.html" />
    <link rel="search" title="Search" href="../search.html" />
    <link rel="next" title="12.6. Using Memchecker" href="memchecker.html" />
    <link rel="prev" title="12.4. Using Parallel Debuggers to Debug Open MPI Applications" href="parallel-debug.html" /> 
</head>

<body class="wy-body-for-nav"> 
  <div class="wy-grid-for-nav">
    <nav data-toggle="wy-nav-shift" class="wy-nav-side">
      <div class="wy-side-scroll">
        <div class="wy-side-nav-search" >

          
          
          <a href="../index.html" class="icon icon-home">
            Open MPI
          </a>
<div role="search">
  <form id="rtd-search-form" class="wy-form" action="../search.html" method="get">
    <input type="text" name="q" placeholder="Search docs" aria-label="Search docs" />
    <input type="hidden" name="check_keywords" value="yes" />
    <input type="hidden" name="area" value="default" />
  </form>
</div>
        </div><div class="wy-menu wy-menu-vertical" data-spy="affix" role="navigation" aria-label="Navigation menu">
              <ul class="current">
<li class="toctree-l1"><a class="reference internal" href="../quickstart.html">1. Quick start</a></li>
<li class="toctree-l1"><a class="reference internal" href="../getting-help.html">2. Getting help</a></li>
<li class="toctree-l1"><a class="reference internal" href="../release-notes/index.html">3. Release notes</a></li>
<li class="toctree-l1"><a class="reference internal" href="../installing-open-mpi/index.html">4. Building and installing Open MPI</a></li>
<li class="toctree-l1"><a class="reference internal" href="../features/index.html">5. Open MPI-specific features</a></li>
<li class="toctree-l1"><a class="reference internal" href="../validate.html">6. Validating your installation</a></li>
<li class="toctree-l1"><a class="reference internal" href="../version-numbering.html">7. Version numbers and compatibility</a></li>
<li class="toctree-l1"><a class="reference internal" href="../mca.html">8. The Modular Component Architecture (MCA)</a></li>
<li class="toctree-l1"><a class="reference internal" href="../building-apps/index.html">9. Building MPI applications</a></li>
<li class="toctree-l1"><a class="reference internal" href="../launching-apps/index.html">10. Launching MPI applications</a></li>
<li class="toctree-l1"><a class="reference internal" href="../tuning-apps/index.html">11. Run-time operation and tuning MPI applications</a></li>
<li class="toctree-l1 current"><a class="reference internal" href="index.html">12. Debugging Open MPI Parallel Applications</a><ul class="current">
<li class="toctree-l2"><a class="reference internal" href="debug-tools.html">12.1. Parallel Debugging Tools</a></li>
<li class="toctree-l2"><a class="reference internal" href="debug-options.html">12.2. Open MPI Runtime Debugging Options</a></li>
<li class="toctree-l2"><a class="reference internal" href="serial-debug.html">12.3. Using Serial Debuggers to Debug Open MPI Applications</a></li>
<li class="toctree-l2"><a class="reference internal" href="parallel-debug.html">12.4. Using Parallel Debuggers to Debug Open MPI Applications</a></li>
<li class="toctree-l2 current"><a class="current reference internal" href="#">12.5. Application Output Lost with Abnormal Termination</a></li>
<li class="toctree-l2"><a class="reference internal" href="memchecker.html">12.6. Using Memchecker</a></li>
<li class="toctree-l2"><a class="reference internal" href="valgrind.html">12.7. Using Valgrind to Find Open MPI Application Errors</a></li>
<li class="toctree-l2"><a class="reference internal" href="mpir-tools.html">12.8. Using MPIR-based tools with Open MPI</a></li>
</ul>
</li>
<li class="toctree-l1"><a class="reference internal" href="../developers/index.html">13. Developer’s guide</a></li>
<li class="toctree-l1"><a class="reference internal" href="../contributing.html">14. Contributing to Open MPI</a></li>
<li class="toctree-l1"><a class="reference internal" href="../license/index.html">15. License</a></li>
<li class="toctree-l1"><a class="reference internal" href="../history.html">16. History of Open MPI</a></li>
<li class="toctree-l1"><a class="reference internal" href="../man-openmpi/index.html">17. Open MPI manual pages</a></li>
<li class="toctree-l1"><a class="reference internal" href="../man-openshmem/index.html">18. OpenSHMEM manual pages</a></li>
</ul>

        </div>
      </div>
    </nav>

    <section data-toggle="wy-nav-shift" class="wy-nav-content-wrap"><nav class="wy-nav-top" aria-label="Mobile navigation menu" >
          <i data-toggle="wy-nav-top" class="fa fa-bars"></i>
          <a href="../index.html">Open MPI</a>
      </nav>

      <div class="wy-nav-content">
        <div class="rst-content">
          <div role="navigation" aria-label="Page navigation">
  <ul class="wy-breadcrumbs">
      <li><a href="../index.html" class="icon icon-home" aria-label="Home"></a></li>
          <li class="breadcrumb-item"><a href="index.html"><span class="section-number">12. </span>Debugging Open MPI Parallel Applications</a></li>
      <li class="breadcrumb-item active"><span class="section-number">12.5. </span>Application Output Lost with Abnormal Termination</li>
      <li class="wy-breadcrumbs-aside">
            <a href="../_sources/app-debug/lost-output.rst.txt" rel="nofollow"> View page source</a>
      </li>
  </ul>
  <hr/>
</div>
          <div role="main" class="document" itemscope="itemscope" itemtype="http://schema.org/Article">
           <div itemprop="articleBody">
             
  <style>
.wy-table-responsive table td,.wy-table-responsive table th{white-space:normal}
</style><div class="section" id="application-output-lost-with-abnormal-termination">
<h1><span class="section-number">12.5. </span>Application Output Lost with Abnormal Termination<a class="headerlink" href="#application-output-lost-with-abnormal-termination" title="Permalink to this heading"></a></h1>
<p>There many be many reasons for application output to be lost when
an application abnormally terminates. The Open MPI Team strongly
encourages the use of tools (such as debuggers) whenever possible.</p>
<p>One of the reasons, however, may come from inside Open MPI itself.  If
your application fails due to memory corruption, Open MPI may
subsequently fail to output an error message before terminating.
Open MPI attempts to aggregate error
messages from multiple processes in an attempt to show unique error
messages only once (vs. once for each MPI process — which can be
unwieldy, especially when running large MPI jobs).</p>
<p>However, this aggregation process requires allocating memory in the
MPI process when it displays the error message.  If the process’s
memory is already corrupted, Open MPI’s attempt to allocate memory may
fail and the process will simply terminate, possibly silently.  When Open
MPI does not attempt to aggregate error messages, most of its setup
work is done when the MPI library is initiaized  and no memory is allocated
during the “print the error” routine.  It therefore almost always successfully
outputs error messages in real time — but at the expense that you’ll
potentially see the same error message for <em>each</em> MPI process that
encountered the error.</p>
<p>Hence, the error message aggregation is <em>usually</em> a good thing, but
sometimes it can mask a real error.  You can disable Open MPI’s error
message aggregation with the <code class="docutils literal notranslate"><span class="pre">opal_base_help_aggregate</span></code> MCA
parameter.  For example:</p>
<div class="highlight-sh notranslate"><div class="highlight"><pre><span></span>shell$<span class="w"> </span>mpirun<span class="w"> </span>--mca<span class="w"> </span>opal_base_help_aggregate<span class="w"> </span><span class="m">0</span><span class="w"> </span>...
</pre></div>
</div>
</div>


           </div>
          </div>
          <footer><div class="rst-footer-buttons" role="navigation" aria-label="Footer">
        <a href="parallel-debug.html" class="btn btn-neutral float-left" title="12.4. Using Parallel Debuggers to Debug Open MPI Applications" accesskey="p" rel="prev"><span class="fa fa-arrow-circle-left" aria-hidden="true"></span> Previous</a>
        <a href="memchecker.html" class="btn btn-neutral float-right" title="12.6. Using Memchecker" accesskey="n" rel="next">Next <span class="fa fa-arrow-circle-right" aria-hidden="true"></span></a>
    </div>

  <hr/>

  <div role="contentinfo">
    <p>&#169; Copyright 2003-2025, The Open MPI Community.
      <span class="lastupdated">Last updated on 2025-05-30 16:41:43 UTC.
      </span></p>
  </div>

  Built with <a href="https://www.sphinx-doc.org/">Sphinx</a> using a
    <a href="https://github.com/readthedocs/sphinx_rtd_theme">theme</a>
    provided by <a href="https://readthedocs.org">Read the Docs</a>.
   

</footer>
        </div>
      </div>
    </section>
  </div>
  <script>
      jQuery(function () {
          SphinxRtdTheme.Navigation.enable(true);
      });
  </script> 

</body>
</html>