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<a href="AcqusHandler_8h.html">Go to the documentation of this file.</a><div class="fragment"><div class="line"><a name="l00001"></a><span class="lineno"> 1</span> <span class="comment">// --------------------------------------------------------------------------</span></div>
<div class="line"><a name="l00002"></a><span class="lineno"> 2</span> <span class="comment">// OpenMS -- Open-Source Mass Spectrometry</span></div>
<div class="line"><a name="l00003"></a><span class="lineno"> 3</span> <span class="comment">// --------------------------------------------------------------------------</span></div>
<div class="line"><a name="l00004"></a><span class="lineno"> 4</span> <span class="comment">// Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,</span></div>
<div class="line"><a name="l00005"></a><span class="lineno"> 5</span> <span class="comment">// ETH Zurich, and Freie Universitaet Berlin 2002-2013.</span></div>
<div class="line"><a name="l00006"></a><span class="lineno"> 6</span> <span class="comment">//</span></div>
<div class="line"><a name="l00007"></a><span class="lineno"> 7</span> <span class="comment">// This software is released under a three-clause BSD license:</span></div>
<div class="line"><a name="l00008"></a><span class="lineno"> 8</span> <span class="comment">// * Redistributions of source code must retain the above copyright</span></div>
<div class="line"><a name="l00009"></a><span class="lineno"> 9</span> <span class="comment">// notice, this list of conditions and the following disclaimer.</span></div>
<div class="line"><a name="l00010"></a><span class="lineno"> 10</span> <span class="comment">// * Redistributions in binary form must reproduce the above copyright</span></div>
<div class="line"><a name="l00011"></a><span class="lineno"> 11</span> <span class="comment">// notice, this list of conditions and the following disclaimer in the</span></div>
<div class="line"><a name="l00012"></a><span class="lineno"> 12</span> <span class="comment">// documentation and/or other materials provided with the distribution.</span></div>
<div class="line"><a name="l00013"></a><span class="lineno"> 13</span> <span class="comment">// * Neither the name of any author or any participating institution</span></div>
<div class="line"><a name="l00014"></a><span class="lineno"> 14</span> <span class="comment">// may be used to endorse or promote products derived from this software</span></div>
<div class="line"><a name="l00015"></a><span class="lineno"> 15</span> <span class="comment">// without specific prior written permission.</span></div>
<div class="line"><a name="l00016"></a><span class="lineno"> 16</span> <span class="comment">// For a full list of authors, refer to the file AUTHORS.</span></div>
<div class="line"><a name="l00017"></a><span class="lineno"> 17</span> <span class="comment">// --------------------------------------------------------------------------</span></div>
<div class="line"><a name="l00018"></a><span class="lineno"> 18</span> <span class="comment">// THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"</span></div>
<div class="line"><a name="l00019"></a><span class="lineno"> 19</span> <span class="comment">// AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE</span></div>
<div class="line"><a name="l00020"></a><span class="lineno"> 20</span> <span class="comment">// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE</span></div>
<div class="line"><a name="l00021"></a><span class="lineno"> 21</span> <span class="comment">// ARE DISCLAIMED. IN NO EVENT SHALL ANY OF THE AUTHORS OR THE CONTRIBUTING</span></div>
<div class="line"><a name="l00022"></a><span class="lineno"> 22</span> <span class="comment">// INSTITUTIONS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,</span></div>
<div class="line"><a name="l00023"></a><span class="lineno"> 23</span> <span class="comment">// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,</span></div>
<div class="line"><a name="l00024"></a><span class="lineno"> 24</span> <span class="comment">// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;</span></div>
<div class="line"><a name="l00025"></a><span class="lineno"> 25</span> <span class="comment">// OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,</span></div>
<div class="line"><a name="l00026"></a><span class="lineno"> 26</span> <span class="comment">// WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR</span></div>
<div class="line"><a name="l00027"></a><span class="lineno"> 27</span> <span class="comment">// OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF</span></div>
<div class="line"><a name="l00028"></a><span class="lineno"> 28</span> <span class="comment">// ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.</span></div>
<div class="line"><a name="l00029"></a><span class="lineno"> 29</span> <span class="comment">//</span></div>
<div class="line"><a name="l00030"></a><span class="lineno"> 30</span> <span class="comment">// --------------------------------------------------------------------------</span></div>
<div class="line"><a name="l00031"></a><span class="lineno"> 31</span> <span class="comment">// $Maintainer: Guillaume Belz$</span></div>
<div class="line"><a name="l00032"></a><span class="lineno"> 32</span> <span class="comment">// $Authors: Guillaume Belz$</span></div>
<div class="line"><a name="l00033"></a><span class="lineno"> 33</span> <span class="comment">// --------------------------------------------------------------------------</span></div>
<div class="line"><a name="l00034"></a><span class="lineno"> 34</span> </div>
<div class="line"><a name="l00035"></a><span class="lineno"> 35</span> <span class="preprocessor">#ifndef OPENMS_FORMAT_HANDLERS_ACQUSHANDLER_H</span></div>
<div class="line"><a name="l00036"></a><span class="lineno"> 36</span> <span class="preprocessor"></span><span class="preprocessor">#define OPENMS_FORMAT_HANDLERS_ACQUSHANDLER_H</span></div>
<div class="line"><a name="l00037"></a><span class="lineno"> 37</span> <span class="preprocessor"></span></div>
<div class="line"><a name="l00038"></a><span class="lineno"> 38</span> <span class="preprocessor">#include <<a class="code" href="String_8h.html">OpenMS/DATASTRUCTURES/String.h</a>></span></div>
<div class="line"><a name="l00039"></a><span class="lineno"> 39</span> <span class="preprocessor">#include <<a class="code" href="Map_8h.html">OpenMS/DATASTRUCTURES/Map.h</a>></span></div>
<div class="line"><a name="l00040"></a><span class="lineno"> 40</span> </div>
<div class="line"><a name="l00041"></a><span class="lineno"> 41</span> <span class="keyword">namespace </span>OpenMS</div>
<div class="line"><a name="l00042"></a><span class="lineno"> 42</span> {</div>
<div class="line"><a name="l00043"></a><span class="lineno"> 43</span>  <span class="keyword">namespace </span>Internal</div>
<div class="line"><a name="l00044"></a><span class="lineno"> 44</span>  {</div>
<div class="line"><a name="l00053"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1AcqusHandler.html"> 53</a></span>  <span class="keyword">class </span>OPENMS_DLLAPI <a class="code" href="classOpenMS_1_1Internal_1_1AcqusHandler.html">AcqusHandler</a></div>
<div class="line"><a name="l00054"></a><span class="lineno"> 54</span>  {</div>
<div class="line"><a name="l00055"></a><span class="lineno"> 55</span> <span class="keyword">public</span>:</div>
<div class="line"><a name="l00066"></a><span class="lineno"> 66</span>  <a class="code" href="classOpenMS_1_1Internal_1_1AcqusHandler.html">AcqusHandler</a>(<span class="keyword">const</span> <a class="code" href="classOpenMS_1_1String.html">String</a> & filename);</div>
<div class="line"><a name="l00067"></a><span class="lineno"> 67</span> </div>
<div class="line"><a name="l00069"></a><span class="lineno"> 69</span>  <span class="keyword">virtual</span> ~<a class="code" href="classOpenMS_1_1Internal_1_1AcqusHandler.html">AcqusHandler</a>();</div>
<div class="line"><a name="l00070"></a><span class="lineno"> 70</span> </div>
<div class="line"><a name="l00072"></a><span class="lineno"> 72</span>  <a class="code" href="classdouble.html">DoubleReal</a> getPosition(<a class="code" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a> index);</div>
<div class="line"><a name="l00073"></a><span class="lineno"> 73</span> </div>
<div class="line"><a name="l00075"></a><span class="lineno"> 75</span>  <a class="code" href="classOpenMS_1_1String.html">String</a> getParam(<span class="keyword">const</span> <a class="code" href="classOpenMS_1_1String.html">String</a> & param);</div>
<div class="line"><a name="l00076"></a><span class="lineno"> 76</span> </div>
<div class="line"><a name="l00078"></a><span class="lineno"> 78</span>  <a class="code" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a> getSize();</div>
<div class="line"><a name="l00079"></a><span class="lineno"> 79</span> </div>
<div class="line"><a name="l00080"></a><span class="lineno"> 80</span> <span class="keyword">private</span>:</div>
<div class="line"><a name="l00082"></a><span class="lineno"> 82</span>  <a class="code" href="classOpenMS_1_1Internal_1_1AcqusHandler.html">AcqusHandler</a>();</div>
<div class="line"><a name="l00083"></a><span class="lineno"> 83</span> </div>
<div class="line"><a name="l00085"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1AcqusHandler.html#aff6823a2224876dddb93cf80e7527df4"> 85</a></span>  <a class="code" href="classOpenMS_1_1Map.html">Map<String, String></a> <a class="code" href="classOpenMS_1_1Internal_1_1AcqusHandler.html#aff6823a2224876dddb93cf80e7527df4">params_</a>;</div>
<div class="line"><a name="l00086"></a><span class="lineno"> 86</span> </div>
<div class="line"><a name="l00089"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1AcqusHandler.html#a238217360173ae4070922dacee3918e8"> 89</a></span>  <a class="code" href="classdouble.html">DoubleReal</a> <a class="code" href="classOpenMS_1_1Internal_1_1AcqusHandler.html#a238217360173ae4070922dacee3918e8">dw_</a>;</div>
<div class="line"><a name="l00090"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1AcqusHandler.html#aac6e758452ef2fcb82b23e009f7bb8ef"> 90</a></span>  <a class="code" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a> <a class="code" href="classOpenMS_1_1Internal_1_1AcqusHandler.html#aac6e758452ef2fcb82b23e009f7bb8ef">delay_</a>;</div>
<div class="line"><a name="l00091"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1AcqusHandler.html#ad04ec8ea37e5b336f7ee49535ed8f450"> 91</a></span>  <a class="code" href="classdouble.html">DoubleReal</a> <a class="code" href="classOpenMS_1_1Internal_1_1AcqusHandler.html#ad04ec8ea37e5b336f7ee49535ed8f450">ml1_</a>;</div>
<div class="line"><a name="l00092"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1AcqusHandler.html#af7cb8b507ffa3fa080e875694904ae79"> 92</a></span>  <a class="code" href="classdouble.html">DoubleReal</a> <a class="code" href="classOpenMS_1_1Internal_1_1AcqusHandler.html#af7cb8b507ffa3fa080e875694904ae79">ml2_</a>;</div>
<div class="line"><a name="l00093"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1AcqusHandler.html#aba27dffee02c5953bb02b32e3803da42"> 93</a></span>  <a class="code" href="classdouble.html">DoubleReal</a> <a class="code" href="classOpenMS_1_1Internal_1_1AcqusHandler.html#aba27dffee02c5953bb02b32e3803da42">ml3_</a>;</div>
<div class="line"><a name="l00094"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1AcqusHandler.html#a7bbf0f40a8d48b308af3da11ad2f4525"> 94</a></span>  <a class="code" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a> <a class="code" href="classOpenMS_1_1Internal_1_1AcqusHandler.html#a7bbf0f40a8d48b308af3da11ad2f4525">td_</a>;</div>
<div class="line"><a name="l00096"></a><span class="lineno"> 96</span>  };</div>
<div class="line"><a name="l00097"></a><span class="lineno"> 97</span>  } <span class="comment">// namespace Internal</span></div>
<div class="line"><a name="l00098"></a><span class="lineno"> 98</span> } <span class="comment">// namespace OpenMS</span></div>
<div class="line"><a name="l00099"></a><span class="lineno"> 99</span> </div>
<div class="line"><a name="l00100"></a><span class="lineno"> 100</span> <span class="preprocessor">#endif // OPENMS_FORMAT_HANDLERS_ACQUSHANDLER_H</span></div>
<div class="ttc" id="classOpenMS_1_1String_html"><div class="ttname"><a href="classOpenMS_1_1String.html">OpenMS::String</a></div><div class="ttdoc">A more convenient string class. </div><div class="ttdef"><b>Definition:</b> String.h:56</div></div>
<div class="ttc" id="classOpenMS_1_1Internal_1_1AcqusHandler_html_aac6e758452ef2fcb82b23e009f7bb8ef"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AcqusHandler.html#aac6e758452ef2fcb82b23e009f7bb8ef">OpenMS::Internal::AcqusHandler::delay_</a></div><div class="ttdeci">Size delay_</div><div class="ttdef"><b>Definition:</b> AcqusHandler.h:90</div></div>
<div class="ttc" id="Map_8h_html"><div class="ttname"><a href="Map_8h.html">Map.h</a></div></div>
<div class="ttc" id="classdouble_html"><div class="ttname"><a href="classdouble.html">double</a></div></div>
<div class="ttc" id="classOpenMS_1_1Internal_1_1AcqusHandler_html_aba27dffee02c5953bb02b32e3803da42"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AcqusHandler.html#aba27dffee02c5953bb02b32e3803da42">OpenMS::Internal::AcqusHandler::ml3_</a></div><div class="ttdeci">DoubleReal ml3_</div><div class="ttdef"><b>Definition:</b> AcqusHandler.h:93</div></div>
<div class="ttc" id="classOpenMS_1_1Internal_1_1AcqusHandler_html_af7cb8b507ffa3fa080e875694904ae79"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AcqusHandler.html#af7cb8b507ffa3fa080e875694904ae79">OpenMS::Internal::AcqusHandler::ml2_</a></div><div class="ttdeci">DoubleReal ml2_</div><div class="ttdef"><b>Definition:</b> AcqusHandler.h:92</div></div>
<div class="ttc" id="classOpenMS_1_1Internal_1_1AcqusHandler_html_aff6823a2224876dddb93cf80e7527df4"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AcqusHandler.html#aff6823a2224876dddb93cf80e7527df4">OpenMS::Internal::AcqusHandler::params_</a></div><div class="ttdeci">Map< String, String > params_</div><div class="ttdoc">Map for params saving. </div><div class="ttdef"><b>Definition:</b> AcqusHandler.h:85</div></div>
<div class="ttc" id="classOpenMS_1_1Internal_1_1AcqusHandler_html_a7bbf0f40a8d48b308af3da11ad2f4525"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AcqusHandler.html#a7bbf0f40a8d48b308af3da11ad2f4525">OpenMS::Internal::AcqusHandler::td_</a></div><div class="ttdeci">Size td_</div><div class="ttdef"><b>Definition:</b> AcqusHandler.h:94</div></div>
<div class="ttc" id="classOpenMS_1_1Internal_1_1AcqusHandler_html_ad04ec8ea37e5b336f7ee49535ed8f450"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AcqusHandler.html#ad04ec8ea37e5b336f7ee49535ed8f450">OpenMS::Internal::AcqusHandler::ml1_</a></div><div class="ttdeci">DoubleReal ml1_</div><div class="ttdef"><b>Definition:</b> AcqusHandler.h:91</div></div>
<div class="ttc" id="group__Concept_html_gaf9ecec2d692138fab9167164a457cbd4"><div class="ttname"><a href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">OpenMS::Size</a></div><div class="ttdeci">size_t Size</div><div class="ttdoc">Size type e.g. used as variable which can hold result of size() </div><div class="ttdef"><b>Definition:</b> Types.h:144</div></div>
<div class="ttc" id="classOpenMS_1_1Internal_1_1AcqusHandler_html"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AcqusHandler.html">OpenMS::Internal::AcqusHandler</a></div><div class="ttdoc">Read-only acqus File handler for XMass Analysis. </div><div class="ttdef"><b>Definition:</b> AcqusHandler.h:53</div></div>
<div class="ttc" id="classOpenMS_1_1Map_html"><div class="ttname"><a href="classOpenMS_1_1Map.html">OpenMS::Map</a></div><div class="ttdoc">Map class based on the STL map (containing serveral convenience functions) </div><div class="ttdef"><b>Definition:</b> Map.h:50</div></div>
<div class="ttc" id="String_8h_html"><div class="ttname"><a href="String_8h.html">String.h</a></div></div>
<div class="ttc" id="classOpenMS_1_1Internal_1_1AcqusHandler_html_a238217360173ae4070922dacee3918e8"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AcqusHandler.html#a238217360173ae4070922dacee3918e8">OpenMS::Internal::AcqusHandler::dw_</a></div><div class="ttdeci">DoubleReal dw_</div><div class="ttdef"><b>Definition:</b> AcqusHandler.h:89</div></div>
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