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<a href="Fitter1D_8h.html">Go to the documentation of this file.</a><div class="fragment"><div class="line"><a name="l00001"></a><span class="lineno">    1</span>&#160;<span class="comment">// --------------------------------------------------------------------------</span></div>
<div class="line"><a name="l00002"></a><span class="lineno">    2</span>&#160;<span class="comment">//                   OpenMS -- Open-Source Mass Spectrometry</span></div>
<div class="line"><a name="l00003"></a><span class="lineno">    3</span>&#160;<span class="comment">// --------------------------------------------------------------------------</span></div>
<div class="line"><a name="l00004"></a><span class="lineno">    4</span>&#160;<span class="comment">// Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,</span></div>
<div class="line"><a name="l00005"></a><span class="lineno">    5</span>&#160;<span class="comment">// ETH Zurich, and Freie Universitaet Berlin 2002-2013.</span></div>
<div class="line"><a name="l00006"></a><span class="lineno">    6</span>&#160;<span class="comment">//</span></div>
<div class="line"><a name="l00007"></a><span class="lineno">    7</span>&#160;<span class="comment">// This software is released under a three-clause BSD license:</span></div>
<div class="line"><a name="l00008"></a><span class="lineno">    8</span>&#160;<span class="comment">//  * Redistributions of source code must retain the above copyright</span></div>
<div class="line"><a name="l00009"></a><span class="lineno">    9</span>&#160;<span class="comment">//    notice, this list of conditions and the following disclaimer.</span></div>
<div class="line"><a name="l00010"></a><span class="lineno">   10</span>&#160;<span class="comment">//  * Redistributions in binary form must reproduce the above copyright</span></div>
<div class="line"><a name="l00011"></a><span class="lineno">   11</span>&#160;<span class="comment">//    notice, this list of conditions and the following disclaimer in the</span></div>
<div class="line"><a name="l00012"></a><span class="lineno">   12</span>&#160;<span class="comment">//    documentation and/or other materials provided with the distribution.</span></div>
<div class="line"><a name="l00013"></a><span class="lineno">   13</span>&#160;<span class="comment">//  * Neither the name of any author or any participating institution</span></div>
<div class="line"><a name="l00014"></a><span class="lineno">   14</span>&#160;<span class="comment">//    may be used to endorse or promote products derived from this software</span></div>
<div class="line"><a name="l00015"></a><span class="lineno">   15</span>&#160;<span class="comment">//    without specific prior written permission.</span></div>
<div class="line"><a name="l00016"></a><span class="lineno">   16</span>&#160;<span class="comment">// For a full list of authors, refer to the file AUTHORS.</span></div>
<div class="line"><a name="l00017"></a><span class="lineno">   17</span>&#160;<span class="comment">// --------------------------------------------------------------------------</span></div>
<div class="line"><a name="l00018"></a><span class="lineno">   18</span>&#160;<span class="comment">// THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS &quot;AS IS&quot;</span></div>
<div class="line"><a name="l00019"></a><span class="lineno">   19</span>&#160;<span class="comment">// AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE</span></div>
<div class="line"><a name="l00020"></a><span class="lineno">   20</span>&#160;<span class="comment">// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE</span></div>
<div class="line"><a name="l00021"></a><span class="lineno">   21</span>&#160;<span class="comment">// ARE DISCLAIMED. IN NO EVENT SHALL ANY OF THE AUTHORS OR THE CONTRIBUTING</span></div>
<div class="line"><a name="l00022"></a><span class="lineno">   22</span>&#160;<span class="comment">// INSTITUTIONS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,</span></div>
<div class="line"><a name="l00023"></a><span class="lineno">   23</span>&#160;<span class="comment">// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,</span></div>
<div class="line"><a name="l00024"></a><span class="lineno">   24</span>&#160;<span class="comment">// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;</span></div>
<div class="line"><a name="l00025"></a><span class="lineno">   25</span>&#160;<span class="comment">// OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,</span></div>
<div class="line"><a name="l00026"></a><span class="lineno">   26</span>&#160;<span class="comment">// WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR</span></div>
<div class="line"><a name="l00027"></a><span class="lineno">   27</span>&#160;<span class="comment">// OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF</span></div>
<div class="line"><a name="l00028"></a><span class="lineno">   28</span>&#160;<span class="comment">// ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.</span></div>
<div class="line"><a name="l00029"></a><span class="lineno">   29</span>&#160;<span class="comment">//</span></div>
<div class="line"><a name="l00030"></a><span class="lineno">   30</span>&#160;<span class="comment">// --------------------------------------------------------------------------</span></div>
<div class="line"><a name="l00031"></a><span class="lineno">   31</span>&#160;<span class="comment">// $Maintainer: Clemens Groepl $</span></div>
<div class="line"><a name="l00032"></a><span class="lineno">   32</span>&#160;<span class="comment">// $Authors: $</span></div>
<div class="line"><a name="l00033"></a><span class="lineno">   33</span>&#160;<span class="comment">// --------------------------------------------------------------------------</span></div>
<div class="line"><a name="l00034"></a><span class="lineno">   34</span>&#160;</div>
<div class="line"><a name="l00035"></a><span class="lineno">   35</span>&#160;<span class="preprocessor">#ifndef OPENMS_TRANSFORMATIONS_FEATUREFINDER_FITTER1D_H</span></div>
<div class="line"><a name="l00036"></a><span class="lineno">   36</span>&#160;<span class="preprocessor"></span><span class="preprocessor">#define OPENMS_TRANSFORMATIONS_FEATUREFINDER_FITTER1D_H</span></div>
<div class="line"><a name="l00037"></a><span class="lineno">   37</span>&#160;<span class="preprocessor"></span></div>
<div class="line"><a name="l00038"></a><span class="lineno">   38</span>&#160;<span class="preprocessor">#include &lt;<a class="code" href="IsotopeCluster_8h.html">OpenMS/DATASTRUCTURES/IsotopeCluster.h</a>&gt;</span></div>
<div class="line"><a name="l00039"></a><span class="lineno">   39</span>&#160;<span class="preprocessor">#include &lt;<a class="code" href="DefaultParamHandler_8h.html">OpenMS/DATASTRUCTURES/DefaultParamHandler.h</a>&gt;</span></div>
<div class="line"><a name="l00040"></a><span class="lineno">   40</span>&#160;<span class="preprocessor">#include &lt;<a class="code" href="Exception_8h.html">OpenMS/CONCEPT/Exception.h</a>&gt;</span></div>
<div class="line"><a name="l00041"></a><span class="lineno">   41</span>&#160;<span class="preprocessor">#include &lt;<a class="code" href="Feature_8h.html">OpenMS/KERNEL/Feature.h</a>&gt;</span></div>
<div class="line"><a name="l00042"></a><span class="lineno">   42</span>&#160;<span class="preprocessor">#include &lt;<a class="code" href="BasicStatistics_8h.html">OpenMS/MATH/STATISTICS/BasicStatistics.h</a>&gt;</span></div>
<div class="line"><a name="l00043"></a><span class="lineno">   43</span>&#160;<span class="preprocessor">#include &lt;<a class="code" href="FeatureFinderDefs_8h.html">OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderDefs.h</a>&gt;</span></div>
<div class="line"><a name="l00044"></a><span class="lineno">   44</span>&#160;</div>
<div class="line"><a name="l00045"></a><span class="lineno">   45</span>&#160;<span class="keyword">namespace </span>OpenMS</div>
<div class="line"><a name="l00046"></a><span class="lineno">   46</span>&#160;{</div>
<div class="line"><a name="l00047"></a><span class="lineno">   47</span>&#160;  <span class="keyword">class </span>InterpolationModel;</div>
<div class="line"><a name="l00048"></a><span class="lineno">   48</span>&#160;</div>
<div class="line"><a name="l00059"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Fitter1D.html">   59</a></span>&#160;  <span class="keyword">class </span>OPENMS_DLLAPI <a class="code" href="classOpenMS_1_1Fitter1D.html">Fitter1D</a> :</div>
<div class="line"><a name="l00060"></a><span class="lineno">   60</span>&#160;    <span class="keyword">public</span> <a class="code" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a>,</div>
<div class="line"><a name="l00061"></a><span class="lineno">   61</span>&#160;    <span class="keyword">public</span> <a class="code" href="structOpenMS_1_1FeatureFinderDefs.html">FeatureFinderDefs</a></div>
<div class="line"><a name="l00062"></a><span class="lineno">   62</span>&#160;  {</div>
<div class="line"><a name="l00063"></a><span class="lineno">   63</span>&#160;<span class="keyword">public</span>:</div>
<div class="line"><a name="l00064"></a><span class="lineno">   64</span>&#160;</div>
<div class="line"><a name="l00066"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Fitter1D.html#af7439235b89a75354a2e87350e36834f">   66</a></span>&#160;    <span class="keyword">typedef</span> <a class="code" href="structOpenMS_1_1IsotopeCluster.html#aed4049efd4228c847ab300ac4c466eca">IsotopeCluster::IndexSet</a> <a class="code" href="classOpenMS_1_1Fitter1D.html#af7439235b89a75354a2e87350e36834f">IndexSet</a>;</div>
<div class="line"><a name="l00068"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Fitter1D.html#af01a99958d0b18999737158daf8820ac">   68</a></span>&#160;    <span class="keyword">typedef</span> <a class="code" href="structOpenMS_1_1IsotopeCluster_1_1ChargedIndexSet.html">IsotopeCluster::ChargedIndexSet</a> <a class="code" href="classOpenMS_1_1Fitter1D.html#af01a99958d0b18999737158daf8820ac">ChargedIndexSet</a>;</div>
<div class="line"><a name="l00070"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Fitter1D.html#a75145a9f1f2689d0f54565ffbdb1f5d6">   70</a></span>&#160;    <span class="keyword">typedef</span> <a class="code" href="classdouble.html">Feature::CoordinateType</a> <a class="code" href="classOpenMS_1_1Fitter1D.html#a75145a9f1f2689d0f54565ffbdb1f5d6">CoordinateType</a>;</div>
<div class="line"><a name="l00072"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Fitter1D.html#a5226d265fd03c7b41e9945248d241af1">   72</a></span>&#160;    <span class="keyword">typedef</span> <a class="code" href="classOpenMS_1_1BaseFeature.html#a8ca1d75ff489493f4458fa7137186089">Feature::QualityType</a> <a class="code" href="classOpenMS_1_1Fitter1D.html#a5226d265fd03c7b41e9945248d241af1">QualityType</a>;</div>
<div class="line"><a name="l00074"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Fitter1D.html#acb81e212d389ef4e5959be66d4e733c8">   74</a></span>&#160;    <span class="keyword">typedef</span> <a class="code" href="classOpenMS_1_1Peak1D.html">Peak1D</a> <a class="code" href="classOpenMS_1_1Fitter1D.html#acb81e212d389ef4e5959be66d4e733c8">PeakType</a>;</div>
<div class="line"><a name="l00076"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Fitter1D.html#a31ac7361125f91f71e3d07be39a76023">   76</a></span>&#160;    <span class="keyword">typedef</span> std::vector&lt;PeakType&gt; <a class="code" href="classOpenMS_1_1Fitter1D.html#a31ac7361125f91f71e3d07be39a76023">RawDataArrayType</a>;</div>
<div class="line"><a name="l00078"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Fitter1D.html#a1dca38fc61c4c5a612bca5eeb8730da3">   78</a></span>&#160;    <span class="keyword">typedef</span> RawDataArrayType::iterator <a class="code" href="classOpenMS_1_1Fitter1D.html#a1dca38fc61c4c5a612bca5eeb8730da3">PeakIterator</a>;</div>
<div class="line"><a name="l00079"></a><span class="lineno">   79</span>&#160;</div>
<div class="line"><a name="l00081"></a><span class="lineno">   81</span>&#160;    <a class="code" href="classOpenMS_1_1Fitter1D.html">Fitter1D</a>();</div>
<div class="line"><a name="l00082"></a><span class="lineno">   82</span>&#160;</div>
<div class="line"><a name="l00084"></a><span class="lineno">   84</span>&#160;    <a class="code" href="classOpenMS_1_1Fitter1D.html">Fitter1D</a>(<span class="keyword">const</span> <a class="code" href="classOpenMS_1_1Fitter1D.html">Fitter1D</a> &amp; source);</div>
<div class="line"><a name="l00085"></a><span class="lineno">   85</span>&#160;</div>
<div class="line"><a name="l00087"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Fitter1D.html#a59b303b80298eac4070a8565ce5b38a2">   87</a></span>&#160;    <span class="keyword">virtual</span> <a class="code" href="classOpenMS_1_1Fitter1D.html#a59b303b80298eac4070a8565ce5b38a2">~Fitter1D</a>()</div>
<div class="line"><a name="l00088"></a><span class="lineno">   88</span>&#160;    {</div>
<div class="line"><a name="l00089"></a><span class="lineno">   89</span>&#160;    }</div>
<div class="line"><a name="l00090"></a><span class="lineno">   90</span>&#160;</div>
<div class="line"><a name="l00092"></a><span class="lineno">   92</span>&#160;    <span class="keyword">virtual</span> <a class="code" href="classOpenMS_1_1Fitter1D.html">Fitter1D</a> &amp; operator=(<span class="keyword">const</span> <a class="code" href="classOpenMS_1_1Fitter1D.html">Fitter1D</a> &amp; source);</div>
<div class="line"><a name="l00093"></a><span class="lineno">   93</span>&#160;</div>
<div class="line"><a name="l00095"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Fitter1D.html#a78595664bcabdc63cf91fd338883d309">   95</a></span>&#160;    <span class="keyword">virtual</span> <a class="code" href="classOpenMS_1_1Fitter1D.html#a5226d265fd03c7b41e9945248d241af1">QualityType</a> <a class="code" href="classOpenMS_1_1Fitter1D.html#a78595664bcabdc63cf91fd338883d309">fit1d</a>(<span class="keyword">const</span> <a class="code" href="classOpenMS_1_1Fitter1D.html#a31ac7361125f91f71e3d07be39a76023">RawDataArrayType</a> &amp; <span class="comment">/* range */</span>, <a class="code" href="classOpenMS_1_1InterpolationModel.html">InterpolationModel</a> * &amp; <span class="comment">/* model */</span>)</div>
<div class="line"><a name="l00096"></a><span class="lineno">   96</span>&#160;    {</div>
<div class="line"><a name="l00097"></a><span class="lineno">   97</span>&#160;      <span class="keywordflow">throw</span> <a class="code" href="classOpenMS_1_1Exception_1_1NotImplemented.html">Exception::NotImplemented</a>(__FILE__, __LINE__, __PRETTY_FUNCTION__);</div>
<div class="line"><a name="l00098"></a><span class="lineno">   98</span>&#160;    }</div>
<div class="line"><a name="l00099"></a><span class="lineno">   99</span>&#160;</div>
<div class="line"><a name="l00101"></a><span class="lineno">  101</span>&#160;    <span class="keyword">static</span> <span class="keywordtype">void</span> registerChildren();</div>
<div class="line"><a name="l00102"></a><span class="lineno">  102</span>&#160;</div>
<div class="line"><a name="l00103"></a><span class="lineno">  103</span>&#160;<span class="keyword">protected</span>:</div>
<div class="line"><a name="l00104"></a><span class="lineno">  104</span>&#160;</div>
<div class="line"><a name="l00106"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Fitter1D.html#a550aafc7c40f4722708edca5488f5b6b">  106</a></span>&#160;    <a class="code" href="classdouble.html">CoordinateType</a> <a class="code" href="classOpenMS_1_1Fitter1D.html#a550aafc7c40f4722708edca5488f5b6b">tolerance_stdev_box_</a>;</div>
<div class="line"><a name="l00108"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Fitter1D.html#a16eab8728e60312fdffd831177c2a919">  108</a></span>&#160;    <a class="code" href="classdouble.html">CoordinateType</a> <a class="code" href="classOpenMS_1_1Fitter1D.html#a16eab8728e60312fdffd831177c2a919">min_</a>;</div>
<div class="line"><a name="l00110"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Fitter1D.html#a1e9e2590566fa952537334d0e03ec026">  110</a></span>&#160;    <a class="code" href="classdouble.html">CoordinateType</a> <a class="code" href="classOpenMS_1_1Fitter1D.html#a1e9e2590566fa952537334d0e03ec026">max_</a>;</div>
<div class="line"><a name="l00112"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Fitter1D.html#a6d3e1ab500bdb3c2377a52f041fe9fe9">  112</a></span>&#160;    <a class="code" href="classdouble.html">CoordinateType</a> <a class="code" href="classOpenMS_1_1Fitter1D.html#a6d3e1ab500bdb3c2377a52f041fe9fe9">stdev1_</a>;</div>
<div class="line"><a name="l00114"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Fitter1D.html#af3d1df58e6c751f3857b2d482619e6c8">  114</a></span>&#160;    <a class="code" href="classdouble.html">CoordinateType</a> <a class="code" href="classOpenMS_1_1Fitter1D.html#af3d1df58e6c751f3857b2d482619e6c8">stdev2_</a>;</div>
<div class="line"><a name="l00116"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Fitter1D.html#acf152a000c39be576d6534beced98453">  116</a></span>&#160;    <a class="code" href="classOpenMS_1_1Math_1_1BasicStatistics.html">Math::BasicStatistics&lt;&gt;</a> <a class="code" href="classOpenMS_1_1Fitter1D.html#acf152a000c39be576d6534beced98453">statistics_</a>;</div>
<div class="line"><a name="l00118"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Fitter1D.html#a96c09b8586bf3bb69f3917a25a974479">  118</a></span>&#160;    <a class="code" href="classdouble.html">CoordinateType</a> <a class="code" href="classOpenMS_1_1Fitter1D.html#a96c09b8586bf3bb69f3917a25a974479">interpolation_step_</a>;</div>
<div class="line"><a name="l00119"></a><span class="lineno">  119</span>&#160;</div>
<div class="line"><a name="l00120"></a><span class="lineno">  120</span>&#160;    <span class="keyword">virtual</span> <span class="keywordtype">void</span> updateMembers_();</div>
<div class="line"><a name="l00121"></a><span class="lineno">  121</span>&#160;</div>
<div class="line"><a name="l00122"></a><span class="lineno">  122</span>&#160;  };</div>
<div class="line"><a name="l00123"></a><span class="lineno">  123</span>&#160;</div>
<div class="line"><a name="l00124"></a><span class="lineno">  124</span>&#160;}</div>
<div class="line"><a name="l00125"></a><span class="lineno">  125</span>&#160;</div>
<div class="line"><a name="l00126"></a><span class="lineno">  126</span>&#160;<span class="preprocessor">#endif // OPENMS_TRANSFORMATIONS_FEATUREFINDER_FITTER1D_H</span></div>
<div class="ttc" id="BasicStatistics_8h_html"><div class="ttname"><a href="BasicStatistics_8h.html">BasicStatistics.h</a></div></div>
<div class="ttc" id="classOpenMS_1_1Fitter1D_html_af01a99958d0b18999737158daf8820ac"><div class="ttname"><a href="classOpenMS_1_1Fitter1D.html#af01a99958d0b18999737158daf8820ac">OpenMS::Fitter1D::ChargedIndexSet</a></div><div class="ttdeci">IsotopeCluster::ChargedIndexSet ChargedIndexSet</div><div class="ttdoc">IndexSet with charge information. </div><div class="ttdef"><b>Definition:</b> Fitter1D.h:68</div></div>
<div class="ttc" id="classOpenMS_1_1Fitter1D_html_a78595664bcabdc63cf91fd338883d309"><div class="ttname"><a href="classOpenMS_1_1Fitter1D.html#a78595664bcabdc63cf91fd338883d309">OpenMS::Fitter1D::fit1d</a></div><div class="ttdeci">virtual QualityType fit1d(const RawDataArrayType &amp;, InterpolationModel *&amp;)</div><div class="ttdoc">return interpolation model </div><div class="ttdef"><b>Definition:</b> Fitter1D.h:95</div></div>
<div class="ttc" id="classOpenMS_1_1Fitter1D_html_a59b303b80298eac4070a8565ce5b38a2"><div class="ttname"><a href="classOpenMS_1_1Fitter1D.html#a59b303b80298eac4070a8565ce5b38a2">OpenMS::Fitter1D::~Fitter1D</a></div><div class="ttdeci">virtual ~Fitter1D()</div><div class="ttdoc">destructor </div><div class="ttdef"><b>Definition:</b> Fitter1D.h:87</div></div>
<div class="ttc" id="classdouble_html"><div class="ttname"><a href="classdouble.html">double</a></div></div>
<div class="ttc" id="classOpenMS_1_1Math_1_1BasicStatistics_html"><div class="ttname"><a href="classOpenMS_1_1Math_1_1BasicStatistics.html">OpenMS::Math::BasicStatistics</a></div><div class="ttdoc">Calculates some basic statistical parameters of a distribution: sum, mean, variance, and provides the normal approximation. </div><div class="ttdef"><b>Definition:</b> BasicStatistics.h:68</div></div>
<div class="ttc" id="DefaultParamHandler_8h_html"><div class="ttname"><a href="DefaultParamHandler_8h.html">DefaultParamHandler.h</a></div></div>
<div class="ttc" id="Feature_8h_html"><div class="ttname"><a href="Feature_8h.html">Feature.h</a></div></div>
<div class="ttc" id="classOpenMS_1_1Fitter1D_html_a1e9e2590566fa952537334d0e03ec026"><div class="ttname"><a href="classOpenMS_1_1Fitter1D.html#a1e9e2590566fa952537334d0e03ec026">OpenMS::Fitter1D::max_</a></div><div class="ttdeci">CoordinateType max_</div><div class="ttdoc">maximum of the bounding box </div><div class="ttdef"><b>Definition:</b> Fitter1D.h:110</div></div>
<div class="ttc" id="structOpenMS_1_1FeatureFinderDefs_html"><div class="ttname"><a href="structOpenMS_1_1FeatureFinderDefs.html">OpenMS::FeatureFinderDefs</a></div><div class="ttdoc">The purpose of this struct is to provide definitions of classes and typedefs which are used throughou...</div><div class="ttdef"><b>Definition:</b> FeatureFinderDefs.h:51</div></div>
<div class="ttc" id="classOpenMS_1_1InterpolationModel_html"><div class="ttname"><a href="classOpenMS_1_1InterpolationModel.html">OpenMS::InterpolationModel</a></div><div class="ttdoc">Abstract class for 1D-models that are approximated using linear interpolation. </div><div class="ttdef"><b>Definition:</b> InterpolationModel.h:55</div></div>
<div class="ttc" id="classOpenMS_1_1Fitter1D_html_a6d3e1ab500bdb3c2377a52f041fe9fe9"><div class="ttname"><a href="classOpenMS_1_1Fitter1D.html#a6d3e1ab500bdb3c2377a52f041fe9fe9">OpenMS::Fitter1D::stdev1_</a></div><div class="ttdeci">CoordinateType stdev1_</div><div class="ttdoc">standard derivation </div><div class="ttdef"><b>Definition:</b> Fitter1D.h:112</div></div>
<div class="ttc" id="classOpenMS_1_1Fitter1D_html_a550aafc7c40f4722708edca5488f5b6b"><div class="ttname"><a href="classOpenMS_1_1Fitter1D.html#a550aafc7c40f4722708edca5488f5b6b">OpenMS::Fitter1D::tolerance_stdev_box_</a></div><div class="ttdeci">CoordinateType tolerance_stdev_box_</div><div class="ttdoc">standard derivation in bounding box </div><div class="ttdef"><b>Definition:</b> Fitter1D.h:106</div></div>
<div class="ttc" id="classOpenMS_1_1Fitter1D_html_a5226d265fd03c7b41e9945248d241af1"><div class="ttname"><a href="classOpenMS_1_1Fitter1D.html#a5226d265fd03c7b41e9945248d241af1">OpenMS::Fitter1D::QualityType</a></div><div class="ttdeci">Feature::QualityType QualityType</div><div class="ttdoc">Quality of a feature. </div><div class="ttdef"><b>Definition:</b> Fitter1D.h:72</div></div>
<div class="ttc" id="classOpenMS_1_1Peak1D_html"><div class="ttname"><a href="classOpenMS_1_1Peak1D.html">OpenMS::Peak1D</a></div><div class="ttdoc">A 1-dimensional raw data point or peak. </div><div class="ttdef"><b>Definition:</b> Peak1D.h:55</div></div>
<div class="ttc" id="IsotopeCluster_8h_html"><div class="ttname"><a href="IsotopeCluster_8h.html">IsotopeCluster.h</a></div></div>
<div class="ttc" id="classOpenMS_1_1BaseFeature_html_a8ca1d75ff489493f4458fa7137186089"><div class="ttname"><a href="classOpenMS_1_1BaseFeature.html#a8ca1d75ff489493f4458fa7137186089">OpenMS::BaseFeature::QualityType</a></div><div class="ttdeci">Real QualityType</div><div class="ttdoc">Type of quality values. </div><div class="ttdef"><b>Definition:</b> BaseFeature.h:62</div></div>
<div class="ttc" id="classOpenMS_1_1Fitter1D_html_af3d1df58e6c751f3857b2d482619e6c8"><div class="ttname"><a href="classOpenMS_1_1Fitter1D.html#af3d1df58e6c751f3857b2d482619e6c8">OpenMS::Fitter1D::stdev2_</a></div><div class="ttdeci">CoordinateType stdev2_</div><div class="ttdoc">standard derivation </div><div class="ttdef"><b>Definition:</b> Fitter1D.h:114</div></div>
<div class="ttc" id="FeatureFinderDefs_8h_html"><div class="ttname"><a href="FeatureFinderDefs_8h.html">FeatureFinderDefs.h</a></div></div>
<div class="ttc" id="classOpenMS_1_1Fitter1D_html_a75145a9f1f2689d0f54565ffbdb1f5d6"><div class="ttname"><a href="classOpenMS_1_1Fitter1D.html#a75145a9f1f2689d0f54565ffbdb1f5d6">OpenMS::Fitter1D::CoordinateType</a></div><div class="ttdeci">Feature::CoordinateType CoordinateType</div><div class="ttdoc">Single coordinate. </div><div class="ttdef"><b>Definition:</b> Fitter1D.h:70</div></div>
<div class="ttc" id="structOpenMS_1_1IsotopeCluster_1_1ChargedIndexSet_html"><div class="ttname"><a href="structOpenMS_1_1IsotopeCluster_1_1ChargedIndexSet.html">OpenMS::IsotopeCluster::ChargedIndexSet</a></div><div class="ttdoc">index set with associated charge estimate </div><div class="ttdef"><b>Definition:</b> IsotopeCluster.h:53</div></div>
<div class="ttc" id="classOpenMS_1_1Fitter1D_html_a1dca38fc61c4c5a612bca5eeb8730da3"><div class="ttname"><a href="classOpenMS_1_1Fitter1D.html#a1dca38fc61c4c5a612bca5eeb8730da3">OpenMS::Fitter1D::PeakIterator</a></div><div class="ttdeci">RawDataArrayType::iterator PeakIterator</div><div class="ttdoc">Raw data iterator. </div><div class="ttdef"><b>Definition:</b> Fitter1D.h:78</div></div>
<div class="ttc" id="classOpenMS_1_1Fitter1D_html"><div class="ttname"><a href="classOpenMS_1_1Fitter1D.html">OpenMS::Fitter1D</a></div><div class="ttdoc">Abstract base class for all 1D-dimensional model fitter. </div><div class="ttdef"><b>Definition:</b> Fitter1D.h:59</div></div>
<div class="ttc" id="classOpenMS_1_1Fitter1D_html_af7439235b89a75354a2e87350e36834f"><div class="ttname"><a href="classOpenMS_1_1Fitter1D.html#af7439235b89a75354a2e87350e36834f">OpenMS::Fitter1D::IndexSet</a></div><div class="ttdeci">IsotopeCluster::IndexSet IndexSet</div><div class="ttdoc">IndexSet. </div><div class="ttdef"><b>Definition:</b> Fitter1D.h:66</div></div>
<div class="ttc" id="classOpenMS_1_1Fitter1D_html_acf152a000c39be576d6534beced98453"><div class="ttname"><a href="classOpenMS_1_1Fitter1D.html#acf152a000c39be576d6534beced98453">OpenMS::Fitter1D::statistics_</a></div><div class="ttdeci">Math::BasicStatistics statistics_</div><div class="ttdoc">basic statistics </div><div class="ttdef"><b>Definition:</b> Fitter1D.h:116</div></div>
<div class="ttc" id="classOpenMS_1_1DefaultParamHandler_html"><div class="ttname"><a href="classOpenMS_1_1DefaultParamHandler.html">OpenMS::DefaultParamHandler</a></div><div class="ttdoc">A base class for all classes handling default parameters. </div><div class="ttdef"><b>Definition:</b> DefaultParamHandler.h:90</div></div>
<div class="ttc" id="classOpenMS_1_1Fitter1D_html_acb81e212d389ef4e5959be66d4e733c8"><div class="ttname"><a href="classOpenMS_1_1Fitter1D.html#acb81e212d389ef4e5959be66d4e733c8">OpenMS::Fitter1D::PeakType</a></div><div class="ttdeci">Peak1D PeakType</div><div class="ttdoc">Raw data point type. </div><div class="ttdef"><b>Definition:</b> Fitter1D.h:74</div></div>
<div class="ttc" id="structOpenMS_1_1IsotopeCluster_html_aed4049efd4228c847ab300ac4c466eca"><div class="ttname"><a href="structOpenMS_1_1IsotopeCluster.html#aed4049efd4228c847ab300ac4c466eca">OpenMS::IsotopeCluster::IndexSet</a></div><div class="ttdeci">std::set&lt; IndexPair &gt; IndexSet</div><div class="ttdoc">A set of index pairs, usually referring to an MSExperiment. </div><div class="ttdef"><b>Definition:</b> IsotopeCluster.h:50</div></div>
<div class="ttc" id="classOpenMS_1_1Fitter1D_html_a16eab8728e60312fdffd831177c2a919"><div class="ttname"><a href="classOpenMS_1_1Fitter1D.html#a16eab8728e60312fdffd831177c2a919">OpenMS::Fitter1D::min_</a></div><div class="ttdeci">CoordinateType min_</div><div class="ttdoc">minimum of the bounding box </div><div class="ttdef"><b>Definition:</b> Fitter1D.h:108</div></div>
<div class="ttc" id="Exception_8h_html"><div class="ttname"><a href="Exception_8h.html">Exception.h</a></div></div>
<div class="ttc" id="classOpenMS_1_1Exception_1_1NotImplemented_html"><div class="ttname"><a href="classOpenMS_1_1Exception_1_1NotImplemented.html">OpenMS::Exception::NotImplemented</a></div><div class="ttdoc">Not implemented exception. </div><div class="ttdef"><b>Definition:</b> Exception.h:437</div></div>
<div class="ttc" id="classOpenMS_1_1Fitter1D_html_a31ac7361125f91f71e3d07be39a76023"><div class="ttname"><a href="classOpenMS_1_1Fitter1D.html#a31ac7361125f91f71e3d07be39a76023">OpenMS::Fitter1D::RawDataArrayType</a></div><div class="ttdeci">std::vector&lt; PeakType &gt; RawDataArrayType</div><div class="ttdoc">Raw data container type using for the temporary storage of the input data. </div><div class="ttdef"><b>Definition:</b> Fitter1D.h:76</div></div>
<div class="ttc" id="classOpenMS_1_1Fitter1D_html_a96c09b8586bf3bb69f3917a25a974479"><div class="ttname"><a href="classOpenMS_1_1Fitter1D.html#a96c09b8586bf3bb69f3917a25a974479">OpenMS::Fitter1D::interpolation_step_</a></div><div class="ttdeci">CoordinateType interpolation_step_</div><div class="ttdoc">interpolation step size </div><div class="ttdef"><b>Definition:</b> Fitter1D.h:118</div></div>
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