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<a href="GridFeature_8h.html">Go to the documentation of this file.</a><div class="fragment"><div class="line"><a name="l00001"></a><span class="lineno">    1</span>&#160;<span class="comment">// --------------------------------------------------------------------------</span></div>
<div class="line"><a name="l00002"></a><span class="lineno">    2</span>&#160;<span class="comment">//                   OpenMS -- Open-Source Mass Spectrometry</span></div>
<div class="line"><a name="l00003"></a><span class="lineno">    3</span>&#160;<span class="comment">// --------------------------------------------------------------------------</span></div>
<div class="line"><a name="l00004"></a><span class="lineno">    4</span>&#160;<span class="comment">// Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,</span></div>
<div class="line"><a name="l00005"></a><span class="lineno">    5</span>&#160;<span class="comment">// ETH Zurich, and Freie Universitaet Berlin 2002-2013.</span></div>
<div class="line"><a name="l00006"></a><span class="lineno">    6</span>&#160;<span class="comment">//</span></div>
<div class="line"><a name="l00007"></a><span class="lineno">    7</span>&#160;<span class="comment">// This software is released under a three-clause BSD license:</span></div>
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<div class="line"><a name="l00030"></a><span class="lineno">   30</span>&#160;<span class="comment">// --------------------------------------------------------------------------</span></div>
<div class="line"><a name="l00031"></a><span class="lineno">   31</span>&#160;<span class="comment">// $Maintainer: Hendrik Weisser $</span></div>
<div class="line"><a name="l00032"></a><span class="lineno">   32</span>&#160;<span class="comment">// $Authors: Steffen Sass, Hendrik Weisser $</span></div>
<div class="line"><a name="l00033"></a><span class="lineno">   33</span>&#160;<span class="comment">// --------------------------------------------------------------------------</span></div>
<div class="line"><a name="l00034"></a><span class="lineno">   34</span>&#160;</div>
<div class="line"><a name="l00035"></a><span class="lineno">   35</span>&#160;<span class="preprocessor">#ifndef OPENMS_DATASTRUCTURES_GRIDFEATURE_H</span></div>
<div class="line"><a name="l00036"></a><span class="lineno">   36</span>&#160;<span class="preprocessor"></span><span class="preprocessor">#define OPENMS_DATASTRUCTURES_GRIDFEATURE_H</span></div>
<div class="line"><a name="l00037"></a><span class="lineno">   37</span>&#160;<span class="preprocessor"></span></div>
<div class="line"><a name="l00038"></a><span class="lineno">   38</span>&#160;<span class="preprocessor">#include &lt;<a class="code" href="StandardTypes_8h.html">OpenMS/KERNEL/StandardTypes.h</a>&gt;</span></div>
<div class="line"><a name="l00039"></a><span class="lineno">   39</span>&#160;<span class="preprocessor">#include &lt;<a class="code" href="BaseFeature_8h.html">OpenMS/KERNEL/BaseFeature.h</a>&gt;</span></div>
<div class="line"><a name="l00040"></a><span class="lineno">   40</span>&#160;</div>
<div class="line"><a name="l00041"></a><span class="lineno">   41</span>&#160;<span class="keyword">namespace </span>OpenMS</div>
<div class="line"><a name="l00042"></a><span class="lineno">   42</span>&#160;{</div>
<div class="line"><a name="l00043"></a><span class="lineno">   43</span>&#160;</div>
<div class="line"><a name="l00050"></a><span class="lineno"><a class="line" href="classOpenMS_1_1GridFeature.html">   50</a></span>&#160;  <span class="keyword">class </span>OPENMS_DLLAPI <a class="code" href="classOpenMS_1_1GridFeature.html">GridFeature</a></div>
<div class="line"><a name="l00051"></a><span class="lineno">   51</span>&#160;  {</div>
<div class="line"><a name="l00052"></a><span class="lineno">   52</span>&#160;<span class="keyword">private</span>:</div>
<div class="line"><a name="l00054"></a><span class="lineno"><a class="line" href="classOpenMS_1_1GridFeature.html#a3556a016183a43bc1f85aabacbb510e8">   54</a></span>&#160;    <span class="keyword">const</span> <a class="code" href="classOpenMS_1_1BaseFeature.html">BaseFeature</a> &amp; <a class="code" href="classOpenMS_1_1GridFeature.html#a3556a016183a43bc1f85aabacbb510e8">feature_</a>;</div>
<div class="line"><a name="l00055"></a><span class="lineno">   55</span>&#160;</div>
<div class="line"><a name="l00057"></a><span class="lineno"><a class="line" href="classOpenMS_1_1GridFeature.html#adf6322ccfe59c67100d602cb29d51514">   57</a></span>&#160;    <a class="code" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a> <a class="code" href="classOpenMS_1_1GridFeature.html#adf6322ccfe59c67100d602cb29d51514">map_index_</a>;</div>
<div class="line"><a name="l00058"></a><span class="lineno">   58</span>&#160;</div>
<div class="line"><a name="l00060"></a><span class="lineno"><a class="line" href="classOpenMS_1_1GridFeature.html#ae49e6ed568bc8dac11323e853a1d8c11">   60</a></span>&#160;    <a class="code" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a> <a class="code" href="classOpenMS_1_1GridFeature.html#ae49e6ed568bc8dac11323e853a1d8c11">feature_index_</a>;</div>
<div class="line"><a name="l00061"></a><span class="lineno">   61</span>&#160;</div>
<div class="line"><a name="l00063"></a><span class="lineno"><a class="line" href="classOpenMS_1_1GridFeature.html#a614d1180d16ecbaa6639aa9462e21b17">   63</a></span>&#160;    std::set&lt;AASequence&gt; <a class="code" href="classOpenMS_1_1GridFeature.html#a614d1180d16ecbaa6639aa9462e21b17">annotations_</a>;</div>
<div class="line"><a name="l00064"></a><span class="lineno">   64</span>&#160;</div>
<div class="line"><a name="l00065"></a><span class="lineno">   65</span>&#160;<span class="keyword">public</span>:</div>
<div class="line"><a name="l00072"></a><span class="lineno">   72</span>&#160;    <a class="code" href="classOpenMS_1_1GridFeature.html">GridFeature</a>(<span class="keyword">const</span> <a class="code" href="classOpenMS_1_1BaseFeature.html">BaseFeature</a> &amp; feature, <a class="code" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a> map_index, <a class="code" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a> feature_index);</div>
<div class="line"><a name="l00073"></a><span class="lineno">   73</span>&#160;</div>
<div class="line"><a name="l00075"></a><span class="lineno">   75</span>&#160;    <span class="keyword">const</span> <a class="code" href="classOpenMS_1_1BaseFeature.html">BaseFeature</a> &amp; getFeature() <span class="keyword">const</span>;</div>
<div class="line"><a name="l00076"></a><span class="lineno">   76</span>&#160;</div>
<div class="line"><a name="l00078"></a><span class="lineno">   78</span>&#160;    <span class="keyword">virtual</span> ~<a class="code" href="classOpenMS_1_1GridFeature.html">GridFeature</a>();</div>
<div class="line"><a name="l00079"></a><span class="lineno">   79</span>&#160;</div>
<div class="line"><a name="l00081"></a><span class="lineno">   81</span>&#160;    <a class="code" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a> getMapIndex() <span class="keyword">const</span>;</div>
<div class="line"><a name="l00082"></a><span class="lineno">   82</span>&#160;</div>
<div class="line"><a name="l00084"></a><span class="lineno">   84</span>&#160;    <a class="code" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a> getFeatureIndex() <span class="keyword">const</span>;</div>
<div class="line"><a name="l00085"></a><span class="lineno">   85</span>&#160;</div>
<div class="line"><a name="l00087"></a><span class="lineno">   87</span>&#160;    <a class="code" href="group__Concept.html#ga7cc214a236ad3bb6ad435bdcf5262a3f">Int</a> getID() <span class="keyword">const</span>;</div>
<div class="line"><a name="l00088"></a><span class="lineno">   88</span>&#160;</div>
<div class="line"><a name="l00090"></a><span class="lineno">   90</span>&#160;    <span class="keyword">const</span> std::set&lt;AASequence&gt; &amp; getAnnotations() <span class="keyword">const</span>;</div>
<div class="line"><a name="l00091"></a><span class="lineno">   91</span>&#160;</div>
<div class="line"><a name="l00093"></a><span class="lineno">   93</span>&#160;    <a class="code" href="classdouble.html">DoubleReal</a> getRT() <span class="keyword">const</span>;</div>
<div class="line"><a name="l00094"></a><span class="lineno">   94</span>&#160;</div>
<div class="line"><a name="l00096"></a><span class="lineno">   96</span>&#160;    <a class="code" href="classdouble.html">DoubleReal</a> getMZ() <span class="keyword">const</span>;</div>
<div class="line"><a name="l00097"></a><span class="lineno">   97</span>&#160;  };</div>
<div class="line"><a name="l00098"></a><span class="lineno">   98</span>&#160;}</div>
<div class="line"><a name="l00099"></a><span class="lineno">   99</span>&#160;</div>
<div class="line"><a name="l00100"></a><span class="lineno">  100</span>&#160;<span class="preprocessor">#endif // OPENMS_DATASTRUCTURES_GRIDFEATURE_H</span></div>
<div class="ttc" id="classOpenMS_1_1GridFeature_html_a614d1180d16ecbaa6639aa9462e21b17"><div class="ttname"><a href="classOpenMS_1_1GridFeature.html#a614d1180d16ecbaa6639aa9462e21b17">OpenMS::GridFeature::annotations_</a></div><div class="ttdeci">std::set&lt; AASequence &gt; annotations_</div><div class="ttdoc">Set of peptide sequences annotated to the feature. </div><div class="ttdef"><b>Definition:</b> GridFeature.h:63</div></div>
<div class="ttc" id="StandardTypes_8h_html"><div class="ttname"><a href="StandardTypes_8h.html">StandardTypes.h</a></div></div>
<div class="ttc" id="classOpenMS_1_1GridFeature_html_adf6322ccfe59c67100d602cb29d51514"><div class="ttname"><a href="classOpenMS_1_1GridFeature.html#adf6322ccfe59c67100d602cb29d51514">OpenMS::GridFeature::map_index_</a></div><div class="ttdeci">Size map_index_</div><div class="ttdoc">Index of the feature map or consensus map. </div><div class="ttdef"><b>Definition:</b> GridFeature.h:57</div></div>
<div class="ttc" id="classdouble_html"><div class="ttname"><a href="classdouble.html">double</a></div></div>
<div class="ttc" id="classOpenMS_1_1BaseFeature_html"><div class="ttname"><a href="classOpenMS_1_1BaseFeature.html">OpenMS::BaseFeature</a></div><div class="ttdoc">A basic LC-MS feature. </div><div class="ttdef"><b>Definition:</b> BaseFeature.h:55</div></div>
<div class="ttc" id="classOpenMS_1_1GridFeature_html"><div class="ttname"><a href="classOpenMS_1_1GridFeature.html">OpenMS::GridFeature</a></div><div class="ttdoc">Representation of a feature in a hash grid. </div><div class="ttdef"><b>Definition:</b> GridFeature.h:50</div></div>
<div class="ttc" id="BaseFeature_8h_html"><div class="ttname"><a href="BaseFeature_8h.html">BaseFeature.h</a></div></div>
<div class="ttc" id="group__Concept_html_gaf9ecec2d692138fab9167164a457cbd4"><div class="ttname"><a href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">OpenMS::Size</a></div><div class="ttdeci">size_t Size</div><div class="ttdoc">Size type e.g. used as variable which can hold result of size() </div><div class="ttdef"><b>Definition:</b> Types.h:144</div></div>
<div class="ttc" id="classOpenMS_1_1GridFeature_html_ae49e6ed568bc8dac11323e853a1d8c11"><div class="ttname"><a href="classOpenMS_1_1GridFeature.html#ae49e6ed568bc8dac11323e853a1d8c11">OpenMS::GridFeature::feature_index_</a></div><div class="ttdeci">Size feature_index_</div><div class="ttdoc">Index of the feature in the map. </div><div class="ttdef"><b>Definition:</b> GridFeature.h:60</div></div>
<div class="ttc" id="group__Concept_html_ga7cc214a236ad3bb6ad435bdcf5262a3f"><div class="ttname"><a href="group__Concept.html#ga7cc214a236ad3bb6ad435bdcf5262a3f">OpenMS::Int</a></div><div class="ttdeci">int Int</div><div class="ttdoc">Signed integer type. </div><div class="ttdef"><b>Definition:</b> Types.h:100</div></div>
<div class="ttc" id="classOpenMS_1_1GridFeature_html_a3556a016183a43bc1f85aabacbb510e8"><div class="ttname"><a href="classOpenMS_1_1GridFeature.html#a3556a016183a43bc1f85aabacbb510e8">OpenMS::GridFeature::feature_</a></div><div class="ttdeci">const BaseFeature &amp; feature_</div><div class="ttdoc">Reference to the contained feature. </div><div class="ttdef"><b>Definition:</b> GridFeature.h:54</div></div>
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