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<a href="Identification_8h.html">Go to the documentation of this file.</a><div class="fragment"><div class="line"><a name="l00001"></a><span class="lineno"> 1</span> <span class="comment">// --------------------------------------------------------------------------</span></div>
<div class="line"><a name="l00002"></a><span class="lineno"> 2</span> <span class="comment">// OpenMS -- Open-Source Mass Spectrometry</span></div>
<div class="line"><a name="l00003"></a><span class="lineno"> 3</span> <span class="comment">// --------------------------------------------------------------------------</span></div>
<div class="line"><a name="l00004"></a><span class="lineno"> 4</span> <span class="comment">// Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,</span></div>
<div class="line"><a name="l00005"></a><span class="lineno"> 5</span> <span class="comment">// ETH Zurich, and Freie Universitaet Berlin 2002-2013.</span></div>
<div class="line"><a name="l00006"></a><span class="lineno"> 6</span> <span class="comment">//</span></div>
<div class="line"><a name="l00007"></a><span class="lineno"> 7</span> <span class="comment">// This software is released under a three-clause BSD license:</span></div>
<div class="line"><a name="l00008"></a><span class="lineno"> 8</span> <span class="comment">// * Redistributions of source code must retain the above copyright</span></div>
<div class="line"><a name="l00009"></a><span class="lineno"> 9</span> <span class="comment">// notice, this list of conditions and the following disclaimer.</span></div>
<div class="line"><a name="l00010"></a><span class="lineno"> 10</span> <span class="comment">// * Redistributions in binary form must reproduce the above copyright</span></div>
<div class="line"><a name="l00011"></a><span class="lineno"> 11</span> <span class="comment">// notice, this list of conditions and the following disclaimer in the</span></div>
<div class="line"><a name="l00012"></a><span class="lineno"> 12</span> <span class="comment">// documentation and/or other materials provided with the distribution.</span></div>
<div class="line"><a name="l00013"></a><span class="lineno"> 13</span> <span class="comment">// * Neither the name of any author or any participating institution</span></div>
<div class="line"><a name="l00014"></a><span class="lineno"> 14</span> <span class="comment">// may be used to endorse or promote products derived from this software</span></div>
<div class="line"><a name="l00015"></a><span class="lineno"> 15</span> <span class="comment">// without specific prior written permission.</span></div>
<div class="line"><a name="l00016"></a><span class="lineno"> 16</span> <span class="comment">// For a full list of authors, refer to the file AUTHORS.</span></div>
<div class="line"><a name="l00017"></a><span class="lineno"> 17</span> <span class="comment">// --------------------------------------------------------------------------</span></div>
<div class="line"><a name="l00018"></a><span class="lineno"> 18</span> <span class="comment">// THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"</span></div>
<div class="line"><a name="l00019"></a><span class="lineno"> 19</span> <span class="comment">// AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE</span></div>
<div class="line"><a name="l00020"></a><span class="lineno"> 20</span> <span class="comment">// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE</span></div>
<div class="line"><a name="l00021"></a><span class="lineno"> 21</span> <span class="comment">// ARE DISCLAIMED. IN NO EVENT SHALL ANY OF THE AUTHORS OR THE CONTRIBUTING</span></div>
<div class="line"><a name="l00022"></a><span class="lineno"> 22</span> <span class="comment">// INSTITUTIONS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,</span></div>
<div class="line"><a name="l00023"></a><span class="lineno"> 23</span> <span class="comment">// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,</span></div>
<div class="line"><a name="l00024"></a><span class="lineno"> 24</span> <span class="comment">// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;</span></div>
<div class="line"><a name="l00025"></a><span class="lineno"> 25</span> <span class="comment">// OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,</span></div>
<div class="line"><a name="l00026"></a><span class="lineno"> 26</span> <span class="comment">// WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR</span></div>
<div class="line"><a name="l00027"></a><span class="lineno"> 27</span> <span class="comment">// OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF</span></div>
<div class="line"><a name="l00028"></a><span class="lineno"> 28</span> <span class="comment">// ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.</span></div>
<div class="line"><a name="l00029"></a><span class="lineno"> 29</span> <span class="comment">//</span></div>
<div class="line"><a name="l00030"></a><span class="lineno"> 30</span> <span class="comment">// --------------------------------------------------------------------------</span></div>
<div class="line"><a name="l00031"></a><span class="lineno"> 31</span> <span class="comment">// $Maintainer: Andreas Bertsch $</span></div>
<div class="line"><a name="l00032"></a><span class="lineno"> 32</span> <span class="comment">// $Authors: $</span></div>
<div class="line"><a name="l00033"></a><span class="lineno"> 33</span> <span class="comment">// --------------------------------------------------------------------------</span></div>
<div class="line"><a name="l00034"></a><span class="lineno"> 34</span> </div>
<div class="line"><a name="l00035"></a><span class="lineno"> 35</span> <span class="preprocessor">#ifndef OPENMS_METADATA_IDENTIFICATION_H</span></div>
<div class="line"><a name="l00036"></a><span class="lineno"> 36</span> <span class="preprocessor"></span><span class="preprocessor">#define OPENMS_METADATA_IDENTIFICATION_H</span></div>
<div class="line"><a name="l00037"></a><span class="lineno"> 37</span> <span class="preprocessor"></span></div>
<div class="line"><a name="l00038"></a><span class="lineno"> 38</span> <span class="preprocessor">#include <<a class="code" href="MetaInfoInterface_8h.html">OpenMS/METADATA/MetaInfoInterface.h</a>></span></div>
<div class="line"><a name="l00039"></a><span class="lineno"> 39</span> <span class="preprocessor">#include <<a class="code" href="DateTime_8h.html">OpenMS/DATASTRUCTURES/DateTime.h</a>></span></div>
<div class="line"><a name="l00040"></a><span class="lineno"> 40</span> <span class="preprocessor">#include <<a class="code" href="SpectrumIdentification_8h.html">OpenMS/METADATA/SpectrumIdentification.h</a>></span></div>
<div class="line"><a name="l00041"></a><span class="lineno"> 41</span> </div>
<div class="line"><a name="l00042"></a><span class="lineno"> 42</span> <span class="preprocessor">#include <vector></span></div>
<div class="line"><a name="l00043"></a><span class="lineno"> 43</span> </div>
<div class="line"><a name="l00044"></a><span class="lineno"> 44</span> <span class="keyword">namespace </span>OpenMS</div>
<div class="line"><a name="l00045"></a><span class="lineno"> 45</span> {</div>
<div class="line"><a name="l00053"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Identification.html"> 53</a></span>  <span class="keyword">class </span>OPENMS_DLLAPI <a class="code" href="classOpenMS_1_1Identification.html">Identification</a> :</div>
<div class="line"><a name="l00054"></a><span class="lineno"> 54</span>  <span class="keyword">public</span> <a class="code" href="classOpenMS_1_1MetaInfoInterface.html">MetaInfoInterface</a></div>
<div class="line"><a name="l00055"></a><span class="lineno"> 55</span>  {</div>
<div class="line"><a name="l00056"></a><span class="lineno"> 56</span> <span class="keyword">public</span>:</div>
<div class="line"><a name="l00057"></a><span class="lineno"> 57</span> </div>
<div class="line"><a name="l00059"></a><span class="lineno"> 59</span> </div>
<div class="line"><a name="l00060"></a><span class="lineno"> 60</span>  <a class="code" href="classOpenMS_1_1Identification.html">Identification</a>();</div>
<div class="line"><a name="l00063"></a><span class="lineno"> 63</span>  <span class="keyword">virtual</span> ~<a class="code" href="classOpenMS_1_1Identification.html">Identification</a>();</div>
<div class="line"><a name="l00065"></a><span class="lineno"> 65</span>  <a class="code" href="classOpenMS_1_1Identification.html">Identification</a>(<span class="keyword">const</span> <a class="code" href="classOpenMS_1_1Identification.html">Identification</a> & source);</div>
<div class="line"><a name="l00067"></a><span class="lineno"> 67</span>  <a class="code" href="classOpenMS_1_1Identification.html">Identification</a> & operator=(<span class="keyword">const</span> <a class="code" href="classOpenMS_1_1Identification.html">Identification</a> & source);</div>
<div class="line"><a name="l00069"></a><span class="lineno"> 69</span>  <span class="keywordtype">bool</span> operator==(<span class="keyword">const</span> <a class="code" href="classOpenMS_1_1Identification.html">Identification</a> & rhs) <span class="keyword">const</span>;</div>
<div class="line"><a name="l00071"></a><span class="lineno"> 71</span>  <span class="keywordtype">bool</span> operator!=(<span class="keyword">const</span> <a class="code" href="classOpenMS_1_1Identification.html">Identification</a> & rhs) <span class="keyword">const</span>;</div>
<div class="line"><a name="l00073"></a><span class="lineno"> 73</span> </div>
<div class="line"><a name="l00075"></a><span class="lineno"> 75</span> </div>
<div class="line"><a name="l00076"></a><span class="lineno"> 76</span>  <span class="keywordtype">void</span> setCreationDate(<span class="keyword">const</span> <a class="code" href="classOpenMS_1_1DateTime.html">DateTime</a> & date);</div>
<div class="line"><a name="l00078"></a><span class="lineno"> 78</span> </div>
<div class="line"><a name="l00080"></a><span class="lineno"> 80</span>  <span class="keyword">const</span> <a class="code" href="classOpenMS_1_1DateTime.html">DateTime</a> & getCreationDate() <span class="keyword">const</span>;</div>
<div class="line"><a name="l00081"></a><span class="lineno"> 81</span> </div>
<div class="line"><a name="l00083"></a><span class="lineno"> 83</span>  <span class="keywordtype">void</span> setSpectrumIdentifications(<span class="keyword">const</span> std::vector<SpectrumIdentification> & ids);</div>
<div class="line"><a name="l00084"></a><span class="lineno"> 84</span> </div>
<div class="line"><a name="l00086"></a><span class="lineno"> 86</span>  <span class="keywordtype">void</span> addSpectrumIdentification(<span class="keyword">const</span> <a class="code" href="classOpenMS_1_1SpectrumIdentification.html">SpectrumIdentification</a> & <span class="keywordtype">id</span>);</div>
<div class="line"><a name="l00087"></a><span class="lineno"> 87</span> </div>
<div class="line"><a name="l00089"></a><span class="lineno"> 89</span>  <span class="keyword">const</span> std::vector<SpectrumIdentification> & getSpectrumIdentifications() <span class="keyword">const</span>;</div>
<div class="line"><a name="l00091"></a><span class="lineno"> 91</span> <span class="keyword">protected</span>:</div>
<div class="line"><a name="l00092"></a><span class="lineno"> 92</span> </div>
<div class="line"><a name="l00093"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Identification.html#ae1d43a6f8bee9f364bea98c12662e966"> 93</a></span>  <a class="code" href="classOpenMS_1_1String.html">String</a> <a class="code" href="classOpenMS_1_1Identification.html#ae1d43a6f8bee9f364bea98c12662e966">id_</a>; </div>
<div class="line"><a name="l00094"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Identification.html#a178a57dc7871ed0e326ece6e03502e26"> 94</a></span>  <a class="code" href="classOpenMS_1_1DateTime.html">DateTime</a> <a class="code" href="classOpenMS_1_1Identification.html#a178a57dc7871ed0e326ece6e03502e26">creation_date_</a>; </div>
<div class="line"><a name="l00095"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Identification.html#a9219374259401acc50b0173b9507a881"> 95</a></span>  std::vector<SpectrumIdentification> <a class="code" href="classOpenMS_1_1Identification.html#a9219374259401acc50b0173b9507a881">spectrum_identifications_</a>;</div>
<div class="line"><a name="l00096"></a><span class="lineno"> 96</span> </div>
<div class="line"><a name="l00097"></a><span class="lineno"> 97</span>  };</div>
<div class="line"><a name="l00098"></a><span class="lineno"> 98</span> </div>
<div class="line"><a name="l00099"></a><span class="lineno"> 99</span> } <span class="comment">//namespace OpenMS</span></div>
<div class="line"><a name="l00100"></a><span class="lineno"> 100</span> <span class="preprocessor">#endif // OPENMS_METADATA_IDENTIFICATION_H</span></div>
<div class="ttc" id="classOpenMS_1_1Identification_html_a178a57dc7871ed0e326ece6e03502e26"><div class="ttname"><a href="classOpenMS_1_1Identification.html#a178a57dc7871ed0e326ece6e03502e26">OpenMS::Identification::creation_date_</a></div><div class="ttdeci">DateTime creation_date_</div><div class="ttdoc">Date and time the search was performed. </div><div class="ttdef"><b>Definition:</b> Identification.h:94</div></div>
<div class="ttc" id="classOpenMS_1_1String_html"><div class="ttname"><a href="classOpenMS_1_1String.html">OpenMS::String</a></div><div class="ttdoc">A more convenient string class. </div><div class="ttdef"><b>Definition:</b> String.h:56</div></div>
<div class="ttc" id="DateTime_8h_html"><div class="ttname"><a href="DateTime_8h.html">DateTime.h</a></div></div>
<div class="ttc" id="classOpenMS_1_1Identification_html_a9219374259401acc50b0173b9507a881"><div class="ttname"><a href="classOpenMS_1_1Identification.html#a9219374259401acc50b0173b9507a881">OpenMS::Identification::spectrum_identifications_</a></div><div class="ttdeci">std::vector< SpectrumIdentification > spectrum_identifications_</div><div class="ttdef"><b>Definition:</b> Identification.h:95</div></div>
<div class="ttc" id="classOpenMS_1_1Identification_html_ae1d43a6f8bee9f364bea98c12662e966"><div class="ttname"><a href="classOpenMS_1_1Identification.html#ae1d43a6f8bee9f364bea98c12662e966">OpenMS::Identification::id_</a></div><div class="ttdeci">String id_</div><div class="ttdoc">Identifier. </div><div class="ttdef"><b>Definition:</b> Identification.h:93</div></div>
<div class="ttc" id="classOpenMS_1_1SpectrumIdentification_html"><div class="ttname"><a href="classOpenMS_1_1SpectrumIdentification.html">OpenMS::SpectrumIdentification</a></div><div class="ttdoc">Represents a object which can store the information of an analysisXML instance. </div><div class="ttdef"><b>Definition:</b> SpectrumIdentification.h:50</div></div>
<div class="ttc" id="classOpenMS_1_1Identification_html"><div class="ttname"><a href="classOpenMS_1_1Identification.html">OpenMS::Identification</a></div><div class="ttdoc">Represents a object which can store the information of an analysisXML instance. </div><div class="ttdef"><b>Definition:</b> Identification.h:53</div></div>
<div class="ttc" id="MetaInfoInterface_8h_html"><div class="ttname"><a href="MetaInfoInterface_8h.html">MetaInfoInterface.h</a></div></div>
<div class="ttc" id="classOpenMS_1_1MetaInfoInterface_html"><div class="ttname"><a href="classOpenMS_1_1MetaInfoInterface.html">OpenMS::MetaInfoInterface</a></div><div class="ttdoc">Interface for classes that can store arbitrary meta information (Type-Name-Value tuples). </div><div class="ttdef"><b>Definition:</b> MetaInfoInterface.h:61</div></div>
<div class="ttc" id="SpectrumIdentification_8h_html"><div class="ttname"><a href="SpectrumIdentification_8h.html">SpectrumIdentification.h</a></div></div>
<div class="ttc" id="classOpenMS_1_1DateTime_html"><div class="ttname"><a href="classOpenMS_1_1DateTime.html">OpenMS::DateTime</a></div><div class="ttdoc">DateTime Class. </div><div class="ttdef"><b>Definition:</b> DateTime.h:55</div></div>
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