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<div class="textblock"><code>#include &lt;cmath&gt;</code><br/>
<code>#include &lt;vector&gt;</code><br/>
<code>#include &lt;numeric&gt;</code><br/>
<code>#include &lt;boost/bind.hpp&gt;</code><br/>
<code>#include &lt;complex&gt;</code><br/>
<code>#include &lt;algorithm&gt;</code><br/>
<code>#include &lt;OpenMS/ANALYSIS/OPENSWATH/OPENSWATHALGO/OpenSwathAlgoConfig.h&gt;</code><br/>
<code>#include &quot;<a class="el" href="ANALYSIS_2OPENSWATH_2OPENSWATHALGO_2DATAACCESS_2ISpectrumAccess_8h_source.html">OpenMS/ANALYSIS/OPENSWATH/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h</a>&quot;</code><br/>
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<p><a href="StatsHelpers_8h_source.html">Go to the source code of this file.</a></p>
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Classes</h2></td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structOpenSwath_1_1mySqrt.html">mySqrt</a></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenSwath_1_1mean__and__stddev.html">mean_and_stddev</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">functor to compute the mean and stddev of sequence using the std::foreach algorithm  <a href="classOpenSwath_1_1mean__and__stddev.html#details">More...</a><br/></td></tr>
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Namespaces</h2></td></tr>
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Functions</h2></td></tr>
<tr class="memitem:a546b9a9117f4207e3cfc9ef2ea4aad3d"><td class="memItemLeft" align="right" valign="top">OPENSWATHALGO_DLLAPI void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespaceOpenSwath.html#a546b9a9117f4207e3cfc9ef2ea4aad3d">normalize</a> (const std::vector&lt; <a class="el" href="classdouble.html">double</a> &gt; &amp;intensities, <a class="el" href="classdouble.html">double</a> normalization_factor, std::vector&lt; <a class="el" href="classdouble.html">double</a> &gt; &amp;normalized_intensities)</td></tr>
<tr class="memdesc:a546b9a9117f4207e3cfc9ef2ea4aad3d"><td class="mdescLeft">&#160;</td><td class="mdescRight">Normalize intensities in vector by normalization_factor.  <a href="#a546b9a9117f4207e3cfc9ef2ea4aad3d">More...</a><br/></td></tr>
<tr class="separator:a546b9a9117f4207e3cfc9ef2ea4aad3d"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:ae0c53634415d6187fedbd4be63830087"><td class="memTemplParams" colspan="2">template&lt;typename T &gt; </td></tr>
<tr class="memitem:ae0c53634415d6187fedbd4be63830087"><td class="memTemplItemLeft" align="right" valign="top"><a class="el" href="classdouble.html">double</a>&#160;</td><td class="memTemplItemRight" valign="bottom"><a class="el" href="namespaceOpenSwath.html#ae0c53634415d6187fedbd4be63830087">norm</a> (T beg, T end)</td></tr>
<tr class="memdesc:ae0c53634415d6187fedbd4be63830087"><td class="mdescLeft">&#160;</td><td class="mdescRight">compute the norm of the vector  <a href="#ae0c53634415d6187fedbd4be63830087">More...</a><br/></td></tr>
<tr class="separator:ae0c53634415d6187fedbd4be63830087"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a76a519ac5bb7019920e196b06bd05638"><td class="memTemplParams" colspan="2">template&lt;typename Texp , typename Ttheo &gt; </td></tr>
<tr class="memitem:a76a519ac5bb7019920e196b06bd05638"><td class="memTemplItemLeft" align="right" valign="top"><a class="el" href="classdouble.html">double</a>&#160;</td><td class="memTemplItemRight" valign="bottom"><a class="el" href="namespaceOpenSwath.html#a76a519ac5bb7019920e196b06bd05638">dotProd</a> (Texp intExpBeg, Texp intExpEnd, Ttheo intTheo)</td></tr>
<tr class="memdesc:a76a519ac5bb7019920e196b06bd05638"><td class="mdescLeft">&#160;</td><td class="mdescRight">compute dotprod of vecotrs  <a href="#a76a519ac5bb7019920e196b06bd05638">More...</a><br/></td></tr>
<tr class="separator:a76a519ac5bb7019920e196b06bd05638"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a479125b149c88231a4e3a97d6a8c0576"><td class="memItemLeft" align="right" valign="top">OPENSWATHALGO_DLLAPI <a class="el" href="classdouble.html">double</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespaceOpenSwath.html#a479125b149c88231a4e3a97d6a8c0576">dotprodScoring</a> (std::vector&lt; <a class="el" href="classdouble.html">double</a> &gt; intExp, std::vector&lt; <a class="el" href="classdouble.html">double</a> &gt; theorint)</td></tr>
<tr class="memdesc:a479125b149c88231a4e3a97d6a8c0576"><td class="mdescLeft">&#160;</td><td class="mdescRight">the dot product scoring  <a href="#a479125b149c88231a4e3a97d6a8c0576">More...</a><br/></td></tr>
<tr class="separator:a479125b149c88231a4e3a97d6a8c0576"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a12b1bfedf1d2ca756e964e5dcbdb3543"><td class="memTemplParams" colspan="2">template&lt;typename Texp , typename Ttheo &gt; </td></tr>
<tr class="memitem:a12b1bfedf1d2ca756e964e5dcbdb3543"><td class="memTemplItemLeft" align="right" valign="top"><a class="el" href="classdouble.html">double</a>&#160;</td><td class="memTemplItemRight" valign="bottom"><a class="el" href="namespaceOpenSwath.html#a12b1bfedf1d2ca756e964e5dcbdb3543">manhattanDist</a> (Texp itExpBeg, Texp itExpEnd, Ttheo itTheo)</td></tr>
<tr class="memdesc:a12b1bfedf1d2ca756e964e5dcbdb3543"><td class="mdescLeft">&#160;</td><td class="mdescRight">compute manhattan distance between Exp and Theo  <a href="#a12b1bfedf1d2ca756e964e5dcbdb3543">More...</a><br/></td></tr>
<tr class="separator:a12b1bfedf1d2ca756e964e5dcbdb3543"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a98920f3dc70b731b6b95d0abd070c34a"><td class="memItemLeft" align="right" valign="top">OPENSWATHALGO_DLLAPI <a class="el" href="classdouble.html">double</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespaceOpenSwath.html#a98920f3dc70b731b6b95d0abd070c34a">manhattanScoring</a> (std::vector&lt; <a class="el" href="classdouble.html">double</a> &gt; intExp, std::vector&lt; <a class="el" href="classdouble.html">double</a> &gt; theorint)</td></tr>
<tr class="memdesc:a98920f3dc70b731b6b95d0abd070c34a"><td class="mdescLeft">&#160;</td><td class="mdescRight">manhattan scoring  <a href="#a98920f3dc70b731b6b95d0abd070c34a">More...</a><br/></td></tr>
<tr class="separator:a98920f3dc70b731b6b95d0abd070c34a"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:ae9723e227cff096670229c72f6a2865e"><td class="memTemplParams" colspan="2">template&lt;typename TInputIterator , typename TInputIteratorY &gt; </td></tr>
<tr class="memitem:ae9723e227cff096670229c72f6a2865e"><td class="memTemplItemLeft" align="right" valign="top">std::iterator_traits<br class="typebreak"/>
&lt; TInputIterator &gt;::value_type&#160;</td><td class="memTemplItemRight" valign="bottom"><a class="el" href="namespaceOpenSwath.html#ae9723e227cff096670229c72f6a2865e">cor_pearson</a> (TInputIterator xBeg, TInputIterator xEnd, TInputIteratorY yBeg)</td></tr>
<tr class="memdesc:ae9723e227cff096670229c72f6a2865e"><td class="mdescLeft">&#160;</td><td class="mdescRight">compute prearson correlation of vector x and y  <a href="#ae9723e227cff096670229c72f6a2865e">More...</a><br/></td></tr>
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<TD align="right"><font color="#c0c0c0">Documentation generated on Thu Nov 14 2013 11:19:23 using doxygen 1.8.5</font></TD>
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