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<div class="textblock"><p>Tool to score phosphorylation sites of a peptide. </p>
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<td align="center" bgcolor="#EBEBEB">pot. predecessor tools </td><td valign="middle" rowspan="3"><img class="formulaInl" alt="$ \longrightarrow $" src="form_91.png"/> PhosphoScoring <img class="formulaInl" alt="$ \longrightarrow $" src="form_91.png"/> </td><td align="center" bgcolor="#EBEBEB">pot. successor tools </td></tr>
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<td valign="middle" align="center" rowspan="1"><a class="el" href="TOPP_MascotAdapter.html">MascotAdapter</a> (or other ID engines) </td><td valign="middle" align="center" rowspan="2"><a class="el" href="TOPP_PeptideIndexer.html">PeptideIndexer</a> </td></tr>
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</center> <dl class="experimental"><dt><b><a class="el" href="experimental.html#_experimental000014">Experimental classes:</a></b></dt><dd>This TOPP-tool is not well tested and not all features might be properly implemented and tested.</dd></dl>
<p>Tool for phosphorylation analysis and site localization. Input files are a MSMS spectrum file as well as the corresponding identification file. Firstly, the two files are mapped. Secondly, The tools uses at the moment an implementation of the Ascore according to Beausoleil et al. in order to localize the most probable phosphorylation sites. For details: Beausoleil et al. </p>
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<TD><font color="#c0c0c0">OpenMS / TOPP release 1.11.1</font></TD>
<TD align="right"><font color="#c0c0c0">Documentation generated on Thu Nov 14 2013 11:19:24 using doxygen 1.8.5</font></TD>
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