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<div class="title">TOPPAS </div> </div>
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<div class="textblock"><p>An assistant for GUI-driven TOPP workflow design.</p>
<p>TOPPAS allows to create, edit, open, save, and run TOPP workflows. Pipelines can be created conveniently in a GUI by means of mouse interactions. The parameters of all involved tools can be edited within the application and are also saved as part of the pipeline definition in the <em></em>.toppas file. Furthermore, TOPPAS interactively performs validity checks during the pipeline editing process, in order to make it more difficult to create an invalid workflow. Once set up and saved, a workflow can also be run without the GUI using the <em>ExecutePipeline</em> TOPP tool.</p>
<p>The following figure shows a simple example pipeline that has just been created and executed successfully:</p>
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<img src="TOPPAS_simple_example.png" alt="TOPPAS_simple_example.png"/>
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<p>More information about TOPPAS can be found in the <a class="el" href="TOPPAS_tutorial.html">TOPPAS tutorial</a>.</p>
<p><b>The command line parameters of this tool are:</b> </p>
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TOPPAS -- An assistant for GUI-driven TOPP workflow design.
Usage:
TOPPAS [options] [files]
Options are:
--help Shows this help
-ini <File> Sets the INI file (default: ~/.TOPPAS.ini)
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<TD><font color="#c0c0c0">OpenMS / TOPP release 1.11.1</font></TD>
<TD align="right"><font color="#c0c0c0">Documentation generated on Thu Nov 14 2013 11:19:24 using doxygen 1.8.5</font></TD>
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