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<div class="title">IDEvaluatorGUI </div> </div>
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<div class="textblock"><p>Computes a 'q-value vs. #PSM' plot to visualize the number identifications for a certain q-value.</p>
<p>An arbitrary number of idXML files resulting from a target+decoy search can be provided as input.</p>
<p>Since the q-value can be computed independently from a scoring scheme, no further preprocessing (like IDPep or FDR) is required, apart from a target-decoy annotation! I.e., apply PeptideIndexer to the immediate output of a search engine (or ConsensusID) and use this as input to this tool.</p>
<p><b>The command line parameters of this tool are:</b> </p>
<pre class="fragment"></pre><p> <b>INI file documentation of this tool:</b> </div></div><!-- contents -->
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<TD><font color="#c0c0c0">OpenMS / TOPP release 1.11.1</font></TD>
<TD align="right"><font color="#c0c0c0">Documentation generated on Thu Nov 14 2013 11:19:24 using doxygen 1.8.5</font></TD>
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