File: classOpenMS_1_1BaseLabeler-members.html

package info (click to toggle)
openms 1.11.1-5
  • links: PTS, VCS
  • area: main
  • in suites: jessie, jessie-kfreebsd
  • size: 436,688 kB
  • ctags: 150,907
  • sloc: cpp: 387,126; xml: 71,547; python: 7,764; ansic: 2,626; php: 2,499; sql: 737; ruby: 342; sh: 325; makefile: 128
file content (80 lines) | stat: -rw-r--r-- 14,574 bytes parent folder | download 
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
 
<HTML>
<HEAD>
<TITLE>Member List</TITLE>
<LINK HREF="doxygen.css" REL="stylesheet" TYPE="text/css">
<LINK HREF="style_ini.css" REL="stylesheet" TYPE="text/css">
</HEAD>
<BODY BGCOLOR="#FFFFFF">
<A href="index.html">Home</A> &nbsp;&middot;
<A href="classes.html">Classes</A> &nbsp;&middot;
<A href="annotated.html">Annotated Classes</A> &nbsp;&middot;
<A href="modules.html">Modules</A> &nbsp;&middot;
<A href="functions_func.html">Members</A> &nbsp;&middot;
<A href="namespaces.html">Namespaces</A> &nbsp;&middot;
<A href="pages.html">Related Pages</A>
<HR style="height:1px; border:none; border-top:1px solid #c0c0c0;">
<!-- Generated by Doxygen 1.8.5 -->
<div id="nav-path" class="navpath">
  <ul>
<li class="navelem"><a class="el" href="namespaceOpenMS.html">OpenMS</a></li><li class="navelem"><a class="el" href="classOpenMS_1_1BaseLabeler.html">BaseLabeler</a></li>  </ul>
</div>
</div><!-- top -->
<div class="header">
  <div class="headertitle">
<div class="title">BaseLabeler Member List</div>  </div>
</div><!--header-->
<div class="contents">

<p>This is the complete list of members for <a class="el" href="classOpenMS_1_1BaseLabeler.html">BaseLabeler</a>, including all inherited members.</p>
<table class="directory">
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html#a8d9574a4f5dcf506b57ed1d5ef62eafb">BaseLabeler</a>()</td><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html">BaseLabeler</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html#a988e1f35dc9b477bbf287ecf7b8cee82">channel_description_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html">BaseLabeler</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a7c3b265b697a57615da5cd3274780efd">check_defaults_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html#a48ce86807bfb996dc261b6b1e4e47e35">consensus_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html">BaseLabeler</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#afb6802fda161cb0c1a4a05597f94aecc">DefaultParamHandler</a>(const String &amp;name)</td><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a954da7eef3cfddda446574eaadd20abb">DefaultParamHandler</a>(const DefaultParamHandler &amp;rhs)</td><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a761b1937850c141d0c6fff0e4d633a04">defaults_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a2802c591e6d7fd3fd9cc35f5e875d0ba">defaultsToParam_</a>()</td><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a5a51f3f150b09068256195e934339a19">error_name_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html#a3f75d542eb488ecd8650b14673d16dd2">getChannelIntensityName</a>(const Size channel_index) const </td><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html">BaseLabeler</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html#a90aed6cc7a020052c897817c63c2a3eb">getConsensus</a>()</td><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html">BaseLabeler</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html#abe2fce5095efeecbcd815817430058e0">getDefaultParameters</a>() const </td><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html">BaseLabeler</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a02f02fa9832ca3e8d47c575a39803a2a">getDefaults</a>() const </td><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html#a95044aa92ba3e9d7f72ff5b3acd0b2a0">getDescription</a>() const </td><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html">BaseLabeler</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#aaee0f2845288173de9f6ad47e6ad31d5">getName</a>() const </td><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a7f6aab5a7dfbdd1c062a4352a29361f3">getParameters</a>() const </td><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a768d4a2093627a2f34728656a9721bdf">getSubsections</a>() const </td><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html#a29c8755364e4efeb0df7ccbeaf3a3a9d">mergeProteinAccessions_</a>(Feature &amp;target, const Feature &amp;source) const </td><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html">BaseLabeler</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html#a7d06bf207cf974a9c8727c6f8533f129">mergeProteinIdentificationsMaps_</a>(const FeatureMapSimVector &amp;maps)</td><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html">BaseLabeler</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#ae6b6d68036a573a44f6609460ba2dfb6">operator=</a>(const DefaultParamHandler &amp;rhs)</td><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#ac435f2dd4d9f9328db83af97129a8d7e">operator==</a>(const DefaultParamHandler &amp;rhs) const </td><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a28c73e623c63a4fe3bfceb1ae8274f39">param_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html#a3a4baf4c04e0c6bad29c5f2958d9c094">postDetectabilityHook</a>(FeatureMapSimVector &amp;)=0</td><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html">BaseLabeler</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html#afa4bac3e0bd3d42fc1dca1a066c7c46e">postDigestHook</a>(FeatureMapSimVector &amp;)=0</td><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html">BaseLabeler</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html#a5e4bdc27fbdcfd37de0eff271a0a1778">postIonizationHook</a>(FeatureMapSimVector &amp;)=0</td><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html">BaseLabeler</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html#a2a2d3d6ee40ed2050887ecd55e959f37">postRawMSHook</a>(FeatureMapSimVector &amp;)=0</td><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html">BaseLabeler</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html#a1d04088b5867c87f8da1cf3cdffd386b">postRawTandemMSHook</a>(FeatureMapSimVector &amp;, MSSimExperiment &amp;)=0</td><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html">BaseLabeler</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html#a29264a786af342480b2fba9007bfa6a0">postRTHook</a>(FeatureMapSimVector &amp;)=0</td><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html">BaseLabeler</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html#a5cb471ab0cfdfffa856efa13f48aff92">preCheck</a>(Param &amp;param) const =0</td><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html">BaseLabeler</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html#ad50a70450d9c1a0f822a34250057f385">recomputeConsensus_</a>(const FeatureMapSim &amp;simulated_features)</td><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html">BaseLabeler</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html#a0619c54ebc0b33a02eb71f942bb00111">registerChildren</a>()</td><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html">BaseLabeler</a></td><td class="entry"><span class="mlabel">static</span></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html#acf6ab009189a770808e644baed4a2c6e">rng_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html">BaseLabeler</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a77d37f2e1c12e8bd33ea0e660a89e927">setName</a>(const String &amp;name)</td><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#abc8067511cfc949ae942ea2b08588f81">setParameters</a>(const Param &amp;param)</td><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html#abf6ea7bdfe009f1dc969fe767b963322">setRnd</a>(const SimRandomNumberGenerator &amp;rng)</td><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html">BaseLabeler</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html#a0bac562e2949aa9f0b345ab5d9f5d7bd">setUpHook</a>(FeatureMapSimVector &amp;)=0</td><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html">BaseLabeler</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#ac4b0e20bc59c7a5afe016c69067e428c">subsections_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a776f7572fc4f466e9527ca233471920d">updateMembers_</a>()</td><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td><td class="entry"><span class="mlabel">protected</span><span class="mlabel">virtual</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#aba444910e4fccb93f91bf7ab135f508a">warn_empty_defaults_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html#a5ef109fcb4c3f83e0511f06e2ac3203a">~BaseLabeler</a>()</td><td class="entry"><a class="el" href="classOpenMS_1_1BaseLabeler.html">BaseLabeler</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a11e9d6dd34fe8860874aa8abe0ec121b">~DefaultParamHandler</a>()</td><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
</table></div><!-- contents -->
<HR style="height:1px; border:none; border-top:1px solid #c0c0c0;">
<TABLE width="100%" border="0">
<TR>
<TD><font color="#c0c0c0">OpenMS / TOPP release 1.11.1</font></TD>
<TD align="right"><font color="#c0c0c0">Documentation generated on Thu Nov 14 2013 11:19:33 using doxygen 1.8.5</font></TD>
</TR>
</TABLE>
</BODY>
</HTML>