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<li class="navelem"><a class="el" href="namespaceOpenMS.html">OpenMS</a></li><li class="navelem"><a class="el" href="classOpenMS_1_1ChromatogramExtractor.html">ChromatogramExtractor</a></li>  </ul>
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<div class="title">ChromatogramExtractor Member List</div>  </div>
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<p>This is the complete list of members for <a class="el" href="classOpenMS_1_1ChromatogramExtractor.html">ChromatogramExtractor</a>, including all inherited members.</p>
<table class="directory">
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1ProgressLogger.html#a56589612e0e4164bf80c3918a087d05a">begin_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1ProgressLogger.html">ProgressLogger</a></td><td class="entry"><span class="mlabel">mutable</span><span class="mlabel">protected</span></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1ChromatogramExtractor.html#aebc0d6b93b7fbc4d7a7b1230d55489a0">ChromatogramExtractor</a>()</td><td class="entry"><a class="el" href="classOpenMS_1_1ChromatogramExtractor.html">ChromatogramExtractor</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1ProgressLogger.html#af67907baa897e9fb84df0cb89795b87ca3ab34dd50405af2d5a62627d572f7860">CMD</a> enum value</td><td class="entry"><a class="el" href="classOpenMS_1_1ProgressLogger.html">ProgressLogger</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1ProgressLogger.html#a76072b3919abcf01141ba68da8a001fd">dlg_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1ProgressLogger.html">ProgressLogger</a></td><td class="entry"><span class="mlabel">mutable</span><span class="mlabel">protected</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1ProgressLogger.html#a0c749bf4e621699b7a5c45ae22c2fa90">end_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1ProgressLogger.html">ProgressLogger</a></td><td class="entry"><span class="mlabel">mutable</span><span class="mlabel">protected</span></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1ProgressLogger.html#a1cc1012b0cdaea97f58d571af1ff45de">endProgress</a>() const </td><td class="entry"><a class="el" href="classOpenMS_1_1ProgressLogger.html">ProgressLogger</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1ChromatogramExtractor.html#a8ae1f016ab62bf4c23427e15495e0784">extract_value_bartlett</a>(const SpectrumT &amp;input, const double &amp;mz, Size &amp;peak_idx, double &amp;integrated_intensity, const double &amp;extract_window, const bool ppm)</td><td class="entry"><a class="el" href="classOpenMS_1_1ChromatogramExtractor.html">ChromatogramExtractor</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1ChromatogramExtractor.html#a476e590e0e0491b81412da274dd84eb8">extract_value_tophat</a>(const SpectrumT &amp;input, const double &amp;mz, Size &amp;peak_idx, double &amp;integrated_intensity, const double &amp;extract_window, const bool ppm)</td><td class="entry"><a class="el" href="classOpenMS_1_1ChromatogramExtractor.html">ChromatogramExtractor</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1ChromatogramExtractor.html#a6935de84f69c85bfdf90e5119f705c07">extract_value_tophat</a>(const std::vector&lt; double &gt;::const_iterator &amp;mz_start, std::vector&lt; double &gt;::const_iterator &amp;mz_it, const std::vector&lt; double &gt;::const_iterator &amp;mz_end, std::vector&lt; double &gt;::const_iterator &amp;int_it, const double &amp;mz, double &amp;integrated_intensity, double &amp;extract_window, bool ppm)</td><td class="entry"><a class="el" href="classOpenMS_1_1ChromatogramExtractor.html">ChromatogramExtractor</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1ChromatogramExtractor.html#ab8e5068d0d5799146b80ea6282ff0a6c">extractChromatograms</a>(const ExperimentT &amp;input, ExperimentT &amp;output, OpenMS::TargetedExperiment &amp;transition_exp, double extract_window, bool ppm, TransformationDescription trafo, double rt_extraction_window, String filter)</td><td class="entry"><a class="el" href="classOpenMS_1_1ChromatogramExtractor.html">ChromatogramExtractor</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1ProgressLogger.html#a67024cdd5c34ec571baecabd8f783310">getLogType</a>() const </td><td class="entry"><a class="el" href="classOpenMS_1_1ProgressLogger.html">ProgressLogger</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1ProgressLogger.html#af67907baa897e9fb84df0cb89795b87ca73c6901c7c648a6a735770bc038bb26a">GUI</a> enum value</td><td class="entry"><a class="el" href="classOpenMS_1_1ProgressLogger.html">ProgressLogger</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1ProgressLogger.html#a79bacf60c4109d7517590441c7f85f9c">last_invoke_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1ProgressLogger.html">ProgressLogger</a></td><td class="entry"><span class="mlabel">mutable</span><span class="mlabel">protected</span></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1ProgressLogger.html#af67907baa897e9fb84df0cb89795b87c">LogType</a> enum name</td><td class="entry"><a class="el" href="classOpenMS_1_1ProgressLogger.html">ProgressLogger</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1ProgressLogger.html#af67907baa897e9fb84df0cb89795b87cac157bdf0b85a40d2619cbc8bc1ae5fe2">NONE</a> enum value</td><td class="entry"><a class="el" href="classOpenMS_1_1ProgressLogger.html">ProgressLogger</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1ChromatogramExtractor.html#acee142f4f394a06534b33c828b42f7ec">outsideExtractionWindow_</a>(const ReactionMonitoringTransition &amp;transition, double current_rt, const TransformationDescription &amp;trafo, double rt_extraction_window)</td><td class="entry"><a class="el" href="classOpenMS_1_1ChromatogramExtractor.html">ChromatogramExtractor</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">private</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1ChromatogramExtractor.html#ae505eef01d0c7c8b342bac83fcd81f23">PeptideRTMap_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1ChromatogramExtractor.html">ChromatogramExtractor</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1ChromatogramExtractor.html#acc6dd6bb5820778b452b8adf9334421e">prepareSpectra_</a>(SpectrumSettingsT &amp;settings, std::vector&lt; ChromatogramT &gt; &amp;chromatograms, OpenMS::TargetedExperiment &amp;transition_exp)</td><td class="entry"><a class="el" href="classOpenMS_1_1ChromatogramExtractor.html">ChromatogramExtractor</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">private</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1ProgressLogger.html#a2a106011aec95b2013d7a545f2063d01">ProgressLogger</a>()</td><td class="entry"><a class="el" href="classOpenMS_1_1ProgressLogger.html">ProgressLogger</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1ProgressLogger.html#a94eb3ef5ef94b83eb348dd00a2b53119">recursion_depth_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1ProgressLogger.html">ProgressLogger</a></td><td class="entry"><span class="mlabel">protected</span><span class="mlabel">static</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1ProgressLogger.html#acc3538c5284777d8702ccaefeb61e74c">setLogType</a>(LogType type) const </td><td class="entry"><a class="el" href="classOpenMS_1_1ProgressLogger.html">ProgressLogger</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1ProgressLogger.html#a8852277abd03220cc7b80d6c1bed6fed">setProgress</a>(SignedSize value) const </td><td class="entry"><a class="el" href="classOpenMS_1_1ProgressLogger.html">ProgressLogger</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1ProgressLogger.html#af1c45ecd71b5041b70319249e8e73591">startProgress</a>(SignedSize begin, SignedSize end, const String &amp;label) const </td><td class="entry"><a class="el" href="classOpenMS_1_1ProgressLogger.html">ProgressLogger</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1ProgressLogger.html#a6d9750520313ea7f843d7a49cb2e9e5f">stop_watch_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1ProgressLogger.html">ProgressLogger</a></td><td class="entry"><span class="mlabel">mutable</span><span class="mlabel">protected</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1ProgressLogger.html#a7c691d7de2a43bc5606e96cb15da3641">type_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1ProgressLogger.html">ProgressLogger</a></td><td class="entry"><span class="mlabel">mutable</span><span class="mlabel">protected</span></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1ProgressLogger.html#aec57b26e143202dc119a41592e075932">value_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1ProgressLogger.html">ProgressLogger</a></td><td class="entry"><span class="mlabel">mutable</span><span class="mlabel">protected</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1ChromatogramExtractor.html#a1409f6f0d2531350d7b9e7b0dd4601fc">~ChromatogramExtractor</a>()</td><td class="entry"><a class="el" href="classOpenMS_1_1ChromatogramExtractor.html">ChromatogramExtractor</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1ProgressLogger.html#a19c882d907f90f7f88c7436d82cd2a13">~ProgressLogger</a>()</td><td class="entry"><a class="el" href="classOpenMS_1_1ProgressLogger.html">ProgressLogger</a></td><td class="entry"></td></tr>
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<TD><font color="#c0c0c0">OpenMS / TOPP release 1.11.1</font></TD>
<TD align="right"><font color="#c0c0c0">Documentation generated on Thu Nov 14 2013 11:19:26 using doxygen 1.8.5</font></TD>
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