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<HTML>
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<TITLE>ConsensusMapNormalizerAlgorithmQuantile Class Reference</TITLE>
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<li class="navelem"><a class="el" href="namespaceOpenMS.html">OpenMS</a></li><li class="navelem"><a class="el" href="classOpenMS_1_1ConsensusMapNormalizerAlgorithmQuantile.html">ConsensusMapNormalizerAlgorithmQuantile</a></li> </ul>
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<div class="header">
<div class="summary">
<a href="#pub-methods">Public Member Functions</a> |
<a href="#pub-static-methods">Static Public Member Functions</a> |
<a href="#pri-methods">Private Member Functions</a> |
<a href="classOpenMS_1_1ConsensusMapNormalizerAlgorithmQuantile-members.html">List of all members</a> </div>
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<div class="title">ConsensusMapNormalizerAlgorithmQuantile Class Reference</div> </div>
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<div class="contents">
<p>Algorithms of ConsensusMapNormalizer.
<a href="classOpenMS_1_1ConsensusMapNormalizerAlgorithmQuantile.html#details">More...</a></p>
<p><code>#include <<a class="el" href="ConsensusMapNormalizerAlgorithmQuantile_8h_source.html">OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.h</a>></code></p>
<table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pub-methods"></a>
Public Member Functions</h2></td></tr>
<tr class="memitem:aa7b9d390b9f0b0d35f2c4044297f6e50"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1ConsensusMapNormalizerAlgorithmQuantile.html#aa7b9d390b9f0b0d35f2c4044297f6e50">ConsensusMapNormalizerAlgorithmQuantile</a> ()</td></tr>
<tr class="memdesc:aa7b9d390b9f0b0d35f2c4044297f6e50"><td class="mdescLeft"> </td><td class="mdescRight">default constructor is not implemented -> private <a href="#aa7b9d390b9f0b0d35f2c4044297f6e50">More...</a><br/></td></tr>
<tr class="separator:aa7b9d390b9f0b0d35f2c4044297f6e50"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:affcd0459248d31e0c1f6319a4044237f"><td class="memItemLeft" align="right" valign="top">virtual </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1ConsensusMapNormalizerAlgorithmQuantile.html#affcd0459248d31e0c1f6319a4044237f">~ConsensusMapNormalizerAlgorithmQuantile</a> ()</td></tr>
<tr class="memdesc:affcd0459248d31e0c1f6319a4044237f"><td class="mdescLeft"> </td><td class="mdescRight">destructor is not implemented -> private <a href="#affcd0459248d31e0c1f6319a4044237f">More...</a><br/></td></tr>
<tr class="separator:affcd0459248d31e0c1f6319a4044237f"><td class="memSeparator" colspan="2"> </td></tr>
</table><table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pub-static-methods"></a>
Static Public Member Functions</h2></td></tr>
<tr class="memitem:aba0ea104500ffad7f080d3c48cbac2fe"><td class="memItemLeft" align="right" valign="top">static void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1ConsensusMapNormalizerAlgorithmQuantile.html#aba0ea104500ffad7f080d3c48cbac2fe">normalizeMaps</a> (<a class="el" href="classOpenMS_1_1ConsensusMap.html">ConsensusMap</a> &map)</td></tr>
<tr class="memdesc:aba0ea104500ffad7f080d3c48cbac2fe"><td class="mdescLeft"> </td><td class="mdescRight">normalizes the maps of the consensusMap <a href="#aba0ea104500ffad7f080d3c48cbac2fe">More...</a><br/></td></tr>
<tr class="separator:aba0ea104500ffad7f080d3c48cbac2fe"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a04a3dd5969c4b6e7283f3ff15aa507b6"><td class="memItemLeft" align="right" valign="top">static void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1ConsensusMapNormalizerAlgorithmQuantile.html#a04a3dd5969c4b6e7283f3ff15aa507b6">resample</a> (const std::vector< <a class="el" href="classdouble.html">double</a> > &data_in, std::vector< <a class="el" href="classdouble.html">double</a> > &data_out, <a class="el" href="group__Concept.html#gaba0996d26f7be2572973245b51852757">UInt</a> n_resampling_points)</td></tr>
<tr class="memdesc:a04a3dd5969c4b6e7283f3ff15aa507b6"><td class="mdescLeft"> </td><td class="mdescRight">resamples data_in and writes the results to data_out <a href="#a04a3dd5969c4b6e7283f3ff15aa507b6">More...</a><br/></td></tr>
<tr class="separator:a04a3dd5969c4b6e7283f3ff15aa507b6"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:ac45f59206833f05ad88487b659816046"><td class="memItemLeft" align="right" valign="top">static void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1ConsensusMapNormalizerAlgorithmQuantile.html#ac45f59206833f05ad88487b659816046">extractIntensityVectors</a> (const <a class="el" href="classOpenMS_1_1ConsensusMap.html">ConsensusMap</a> &map, std::vector< std::vector< <a class="el" href="classdouble.html">double</a> > > &out_intensities)</td></tr>
<tr class="memdesc:ac45f59206833f05ad88487b659816046"><td class="mdescLeft"> </td><td class="mdescRight">extracts the intensities of the features of the different maps <a href="#ac45f59206833f05ad88487b659816046">More...</a><br/></td></tr>
<tr class="separator:ac45f59206833f05ad88487b659816046"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:aef267aa33a824d7f3699b7281c588221"><td class="memItemLeft" align="right" valign="top">static void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1ConsensusMapNormalizerAlgorithmQuantile.html#aef267aa33a824d7f3699b7281c588221">setNormalizedIntensityValues</a> (const std::vector< std::vector< <a class="el" href="classdouble.html">double</a> > > &feature_ints, <a class="el" href="classOpenMS_1_1ConsensusMap.html">ConsensusMap</a> &map)</td></tr>
<tr class="memdesc:aef267aa33a824d7f3699b7281c588221"><td class="mdescLeft"> </td><td class="mdescRight">writes the intensity values in feature_ints to the corresponding features in map <a href="#aef267aa33a824d7f3699b7281c588221">More...</a><br/></td></tr>
<tr class="separator:aef267aa33a824d7f3699b7281c588221"><td class="memSeparator" colspan="2"> </td></tr>
</table><table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pri-methods"></a>
Private Member Functions</h2></td></tr>
<tr class="memitem:a21605f58466a430a14f62797f7a85107"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1ConsensusMapNormalizerAlgorithmQuantile.html#a21605f58466a430a14f62797f7a85107">ConsensusMapNormalizerAlgorithmQuantile</a> (const <a class="el" href="classOpenMS_1_1ConsensusMapNormalizerAlgorithmQuantile.html">ConsensusMapNormalizerAlgorithmQuantile</a> &copyin)</td></tr>
<tr class="memdesc:a21605f58466a430a14f62797f7a85107"><td class="mdescLeft"> </td><td class="mdescRight">copy constructor is not implemented -> private <a href="#a21605f58466a430a14f62797f7a85107">More...</a><br/></td></tr>
<tr class="separator:a21605f58466a430a14f62797f7a85107"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a93391c69047df5f923da6e43efcfa341"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1ConsensusMapNormalizerAlgorithmQuantile.html">ConsensusMapNormalizerAlgorithmQuantile</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1ConsensusMapNormalizerAlgorithmQuantile.html#a93391c69047df5f923da6e43efcfa341">operator=</a> (const <a class="el" href="classOpenMS_1_1ConsensusMapNormalizerAlgorithmQuantile.html">ConsensusMapNormalizerAlgorithmQuantile</a> &rhs)</td></tr>
<tr class="memdesc:a93391c69047df5f923da6e43efcfa341"><td class="mdescLeft"> </td><td class="mdescRight">assignment operator is not implemented -> private <a href="#a93391c69047df5f923da6e43efcfa341">More...</a><br/></td></tr>
<tr class="separator:a93391c69047df5f923da6e43efcfa341"><td class="memSeparator" colspan="2"> </td></tr>
</table>
<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
<div class="textblock"><p>Algorithms of ConsensusMapNormalizer. </p>
</div><h2 class="groupheader">Constructor & Destructor Documentation</h2>
<a class="anchor" id="a21605f58466a430a14f62797f7a85107"></a>
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<td class="memname"><a class="el" href="classOpenMS_1_1ConsensusMapNormalizerAlgorithmQuantile.html">ConsensusMapNormalizerAlgorithmQuantile</a> </td>
<td>(</td>
<td class="paramtype">const <a class="el" href="classOpenMS_1_1ConsensusMapNormalizerAlgorithmQuantile.html">ConsensusMapNormalizerAlgorithmQuantile</a> & </td>
<td class="paramname"><em>copyin</em></td><td>)</td>
<td></td>
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<span class="mlabels"><span class="mlabel">private</span></span> </td>
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<p>copy constructor is not implemented -> private </p>
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<a class="anchor" id="aa7b9d390b9f0b0d35f2c4044297f6e50"></a>
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<td class="memname"><a class="el" href="classOpenMS_1_1ConsensusMapNormalizerAlgorithmQuantile.html">ConsensusMapNormalizerAlgorithmQuantile</a> </td>
<td>(</td>
<td class="paramname"></td><td>)</td>
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<p>default constructor is not implemented -> private </p>
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<td class="memname">virtual ~<a class="el" href="classOpenMS_1_1ConsensusMapNormalizerAlgorithmQuantile.html">ConsensusMapNormalizerAlgorithmQuantile</a> </td>
<td>(</td>
<td class="paramname"></td><td>)</td>
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<span class="mlabels"><span class="mlabel">virtual</span></span> </td>
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<p>destructor is not implemented -> private </p>
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<h2 class="groupheader">Member Function Documentation</h2>
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<td class="memname">static void extractIntensityVectors </td>
<td>(</td>
<td class="paramtype">const <a class="el" href="classOpenMS_1_1ConsensusMap.html">ConsensusMap</a> & </td>
<td class="paramname"><em>map</em>, </td>
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<td class="paramkey"></td>
<td></td>
<td class="paramtype">std::vector< std::vector< <a class="el" href="classdouble.html">double</a> > > & </td>
<td class="paramname"><em>out_intensities</em> </td>
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<td>)</td>
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<p>extracts the intensities of the features of the different maps </p>
<dl class="params"><dt>Parameters</dt><dd>
<table class="params">
<tr><td class="paramname">map</td><td><a class="el" href="classOpenMS_1_1ConsensusMap.html" title="A container for consensus elements. ">ConsensusMap</a> </td></tr>
<tr><td class="paramname">out_intensities</td><td>resulting data, contains the feature intensities for each map of the consensus map </td></tr>
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<td class="memname">static void normalizeMaps </td>
<td>(</td>
<td class="paramtype"><a class="el" href="classOpenMS_1_1ConsensusMap.html">ConsensusMap</a> & </td>
<td class="paramname"><em>map</em></td><td>)</td>
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<p>normalizes the maps of the consensusMap </p>
<dl class="params"><dt>Parameters</dt><dd>
<table class="params">
<tr><td class="paramname">map</td><td><a class="el" href="classOpenMS_1_1ConsensusMap.html" title="A container for consensus elements. ">ConsensusMap</a> </td></tr>
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</dd>
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<a class="anchor" id="a93391c69047df5f923da6e43efcfa341"></a>
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<td class="memname"><a class="el" href="classOpenMS_1_1ConsensusMapNormalizerAlgorithmQuantile.html">ConsensusMapNormalizerAlgorithmQuantile</a>& operator= </td>
<td>(</td>
<td class="paramtype">const <a class="el" href="classOpenMS_1_1ConsensusMapNormalizerAlgorithmQuantile.html">ConsensusMapNormalizerAlgorithmQuantile</a> & </td>
<td class="paramname"><em>rhs</em></td><td>)</td>
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<span class="mlabels"><span class="mlabel">private</span></span> </td>
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<p>assignment operator is not implemented -> private </p>
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<td class="memname">static void resample </td>
<td>(</td>
<td class="paramtype">const std::vector< <a class="el" href="classdouble.html">double</a> > & </td>
<td class="paramname"><em>data_in</em>, </td>
</tr>
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<td class="paramkey"></td>
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<td class="paramname"><em>data_out</em>, </td>
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<td class="paramtype"><a class="el" href="group__Concept.html#gaba0996d26f7be2572973245b51852757">UInt</a> </td>
<td class="paramname"><em>n_resampling_points</em> </td>
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<p>resamples data_in and writes the results to data_out </p>
<dl class="params"><dt>Parameters</dt><dd>
<table class="params">
<tr><td class="paramname">data_in</td><td>the data to be resampled </td></tr>
<tr><td class="paramname">data_out</td><td>the results are written to this vector </td></tr>
<tr><td class="paramname">n_resampling_points</td><td>the number of points to resample from data_in </td></tr>
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<td class="memname">static void setNormalizedIntensityValues </td>
<td>(</td>
<td class="paramtype">const std::vector< std::vector< <a class="el" href="classdouble.html">double</a> > > & </td>
<td class="paramname"><em>feature_ints</em>, </td>
</tr>
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<td class="paramkey"></td>
<td></td>
<td class="paramtype"><a class="el" href="classOpenMS_1_1ConsensusMap.html">ConsensusMap</a> & </td>
<td class="paramname"><em>map</em> </td>
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<td>)</td>
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<p>writes the intensity values in feature_ints to the corresponding features in map </p>
<dl class="params"><dt>Parameters</dt><dd>
<table class="params">
<tr><td class="paramname">feature_ints</td><td>contains the new feature intensities for each map of the consensus map </td></tr>
<tr><td class="paramname">map</td><td><a class="el" href="classOpenMS_1_1ConsensusMap.html" title="A container for consensus elements. ">ConsensusMap</a> the map to be updated </td></tr>
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<TD><font color="#c0c0c0">OpenMS / TOPP release 1.11.1</font></TD>
<TD align="right"><font color="#c0c0c0">Documentation generated on Thu Nov 14 2013 11:19:26 using doxygen 1.8.5</font></TD>
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