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<HTML>
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<TITLE>DocumentIdentifier Class Reference</TITLE>
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<li class="navelem"><a class="el" href="namespaceOpenMS.html">OpenMS</a></li><li class="navelem"><a class="el" href="classOpenMS_1_1DocumentIdentifier.html">DocumentIdentifier</a></li> </ul>
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<div class="title">DocumentIdentifier Class Reference<div class="ingroups"><a class="el" href="group__Metadata.html">Metadata</a></div></div> </div>
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<div class="contents">
<p>Manage source document information.
<a href="classOpenMS_1_1DocumentIdentifier.html#details">More...</a></p>
<p><code>#include <<a class="el" href="DocumentIdentifier_8h_source.html">OpenMS/METADATA/DocumentIdentifier.h</a>></code></p>
<div class="dynheader">
Inheritance diagram for DocumentIdentifier:</div>
<div class="dyncontent">
<div class="center">
<img src="classOpenMS_1_1DocumentIdentifier.png" usemap="#DocumentIdentifier_map" alt=""/>
<map id="DocumentIdentifier_map" name="DocumentIdentifier_map">
<area href="classOpenMS_1_1FeatureMap.html" alt="FeatureMap< OpenMS::Feature >" shape="rect" coords="0,56,278,80"/>
<area href="classOpenMS_1_1FeatureMap.html" alt="FeatureMap<>" shape="rect" coords="288,56,566,80"/>
<area href="classOpenMS_1_1ConsensusMap.html" title="A container for consensus elements. " alt="ConsensusMap" shape="rect" coords="576,56,854,80"/>
<area href="classOpenMS_1_1ExperimentalSettings.html" title="Description of the experimental settings. " alt="ExperimentalSettings" shape="rect" coords="864,56,1142,80"/>
<area href="classOpenMS_1_1FeatureMap.html" title="A container for features. " alt="FeatureMap< FeatureT >" shape="rect" coords="1152,56,1430,80"/>
<area href="classOpenMS_1_1MSExperiment.html" alt="MSExperiment< OpenMS::Peak1D >" shape="rect" coords="288,112,566,136"/>
<area href="classOpenMS_1_1MSExperiment.html" alt="MSExperiment< Peak1D >" shape="rect" coords="576,112,854,136"/>
<area href="classOpenMS_1_1MSExperiment.html" alt="MSExperiment< SimPointType >" shape="rect" coords="864,112,1142,136"/>
<area href="classOpenMS_1_1MSExperiment.html" title="Representation of a mass spectrometry experiment. " alt="MSExperiment< PeakT, ChromatogramPeakT >" shape="rect" coords="1152,112,1430,136"/>
<area href="classOpenMS_1_1MSQuantifications.html" alt="MSQuantifications" shape="rect" coords="1440,112,1718,136"/>
</map>
</div></div>
<table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pub-methods"></a>
Public Member Functions</h2></td></tr>
<tr><td colspan="2"><div class="groupHeader">Constructors and Destructors</div></td></tr>
<tr class="memitem:a7fb206677dc6ea82973629409705fd75"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DocumentIdentifier.html#a7fb206677dc6ea82973629409705fd75">DocumentIdentifier</a> ()</td></tr>
<tr class="memdesc:a7fb206677dc6ea82973629409705fd75"><td class="mdescLeft"> </td><td class="mdescRight">default constructor <a href="#a7fb206677dc6ea82973629409705fd75">More...</a><br/></td></tr>
<tr class="separator:a7fb206677dc6ea82973629409705fd75"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a40662ac1f41ebf7483cc85d4f1b409c5"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DocumentIdentifier.html#a40662ac1f41ebf7483cc85d4f1b409c5">DocumentIdentifier</a> (const <a class="el" href="classOpenMS_1_1DocumentIdentifier.html">DocumentIdentifier</a> &source)</td></tr>
<tr class="memdesc:a40662ac1f41ebf7483cc85d4f1b409c5"><td class="mdescLeft"> </td><td class="mdescRight">Copy constructor. <a href="#a40662ac1f41ebf7483cc85d4f1b409c5">More...</a><br/></td></tr>
<tr class="separator:a40662ac1f41ebf7483cc85d4f1b409c5"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a9cef699d5e2f6c8c197a1364605923ac"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1DocumentIdentifier.html">DocumentIdentifier</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DocumentIdentifier.html#a9cef699d5e2f6c8c197a1364605923ac">operator=</a> (const <a class="el" href="classOpenMS_1_1DocumentIdentifier.html">DocumentIdentifier</a> &source)</td></tr>
<tr class="memdesc:a9cef699d5e2f6c8c197a1364605923ac"><td class="mdescLeft"> </td><td class="mdescRight">Assignment operator. <a href="#a9cef699d5e2f6c8c197a1364605923ac">More...</a><br/></td></tr>
<tr class="separator:a9cef699d5e2f6c8c197a1364605923ac"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a75abab7891cf576f294c2878cf00f090"><td class="memItemLeft" align="right" valign="top">bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DocumentIdentifier.html#a75abab7891cf576f294c2878cf00f090">operator==</a> (const <a class="el" href="classOpenMS_1_1DocumentIdentifier.html">DocumentIdentifier</a> &rhs) const </td></tr>
<tr class="memdesc:a75abab7891cf576f294c2878cf00f090"><td class="mdescLeft"> </td><td class="mdescRight">Equality operator. <a href="#a75abab7891cf576f294c2878cf00f090">More...</a><br/></td></tr>
<tr class="separator:a75abab7891cf576f294c2878cf00f090"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a36b60bd2716d88a78e7f80b9ecd83dc8"><td class="memItemLeft" align="right" valign="top">virtual </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DocumentIdentifier.html#a36b60bd2716d88a78e7f80b9ecd83dc8">~DocumentIdentifier</a> ()</td></tr>
<tr class="memdesc:a36b60bd2716d88a78e7f80b9ecd83dc8"><td class="mdescLeft"> </td><td class="mdescRight">destructor <a href="#a36b60bd2716d88a78e7f80b9ecd83dc8">More...</a><br/></td></tr>
<tr class="separator:a36b60bd2716d88a78e7f80b9ecd83dc8"><td class="memSeparator" colspan="2"> </td></tr>
<tr><td colspan="2"><div class="groupHeader">Acessors</div></td></tr>
<tr class="memitem:a00f1456779f764c2738c35be2c04f6e8"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DocumentIdentifier.html#a00f1456779f764c2738c35be2c04f6e8">setIdentifier</a> (const <a class="el" href="classOpenMS_1_1String.html">String</a> &id)</td></tr>
<tr class="memdesc:a00f1456779f764c2738c35be2c04f6e8"><td class="mdescLeft"> </td><td class="mdescRight">set document identifier (e.g. an LSID) <a href="#a00f1456779f764c2738c35be2c04f6e8">More...</a><br/></td></tr>
<tr class="separator:a00f1456779f764c2738c35be2c04f6e8"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a4eb8ec8636a89f575db95a370fd480b6"><td class="memItemLeft" align="right" valign="top">const <a class="el" href="classOpenMS_1_1String.html">String</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DocumentIdentifier.html#a4eb8ec8636a89f575db95a370fd480b6">getIdentifier</a> () const </td></tr>
<tr class="memdesc:a4eb8ec8636a89f575db95a370fd480b6"><td class="mdescLeft"> </td><td class="mdescRight">retrieve document identifier (e.g. an LSID) <a href="#a4eb8ec8636a89f575db95a370fd480b6">More...</a><br/></td></tr>
<tr class="separator:a4eb8ec8636a89f575db95a370fd480b6"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:af35350b215e234aeb68b5a2d058e9c6f"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DocumentIdentifier.html#af35350b215e234aeb68b5a2d058e9c6f">swap</a> (<a class="el" href="classOpenMS_1_1DocumentIdentifier.html">DocumentIdentifier</a> &from)</td></tr>
<tr class="memdesc:af35350b215e234aeb68b5a2d058e9c6f"><td class="mdescLeft"> </td><td class="mdescRight">exchange content with <code>from</code> <a href="#af35350b215e234aeb68b5a2d058e9c6f">More...</a><br/></td></tr>
<tr class="separator:af35350b215e234aeb68b5a2d058e9c6f"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a3b1a4ef7f451b9fdf97c46a128275c99"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DocumentIdentifier.html#a3b1a4ef7f451b9fdf97c46a128275c99">setLoadedFilePath</a> (const <a class="el" href="classOpenMS_1_1String.html">String</a> &file_name)</td></tr>
<tr class="memdesc:a3b1a4ef7f451b9fdf97c46a128275c99"><td class="mdescLeft"> </td><td class="mdescRight">set the file_name_ according to absolute path of the file loaded from preferably done whilst loading <a href="#a3b1a4ef7f451b9fdf97c46a128275c99">More...</a><br/></td></tr>
<tr class="separator:a3b1a4ef7f451b9fdf97c46a128275c99"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:aee7ac99be667b810be1b096691c58efa"><td class="memItemLeft" align="right" valign="top">const <a class="el" href="classOpenMS_1_1String.html">String</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DocumentIdentifier.html#aee7ac99be667b810be1b096691c58efa">getLoadedFilePath</a> () const </td></tr>
<tr class="memdesc:aee7ac99be667b810be1b096691c58efa"><td class="mdescLeft"> </td><td class="mdescRight">get the file_name_ which is the absolute path to the file loaded from <a href="#aee7ac99be667b810be1b096691c58efa">More...</a><br/></td></tr>
<tr class="separator:aee7ac99be667b810be1b096691c58efa"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:aeb9181a2ee15dc517acea64e11ba8f6e"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DocumentIdentifier.html#aeb9181a2ee15dc517acea64e11ba8f6e">setLoadedFileType</a> (const <a class="el" href="classOpenMS_1_1String.html">String</a> &file_name)</td></tr>
<tr class="memdesc:aeb9181a2ee15dc517acea64e11ba8f6e"><td class="mdescLeft"> </td><td class="mdescRight">set the file_type according to the type of the file loaded from (see FileHandler::Type) preferably done whilst loading <a href="#aeb9181a2ee15dc517acea64e11ba8f6e">More...</a><br/></td></tr>
<tr class="separator:aeb9181a2ee15dc517acea64e11ba8f6e"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:ad995fa0a761bfdc08fd54e38b1fa1d55"><td class="memItemLeft" align="right" valign="top">const <a class="el" href="structOpenMS_1_1FileTypes.html#a1d1cfd8ffb84e947f82999c682b666a7">FileTypes::Type</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DocumentIdentifier.html#ad995fa0a761bfdc08fd54e38b1fa1d55">getLoadedFileType</a> () const </td></tr>
<tr class="memdesc:ad995fa0a761bfdc08fd54e38b1fa1d55"><td class="mdescLeft"> </td><td class="mdescRight">get the file_type (e.g. featureXML, consensusXML, mzData, mzXML, mzML, ...) of the file loaded from <a href="#ad995fa0a761bfdc08fd54e38b1fa1d55">More...</a><br/></td></tr>
<tr class="separator:ad995fa0a761bfdc08fd54e38b1fa1d55"><td class="memSeparator" colspan="2"> </td></tr>
</table><table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pro-attribs"></a>
Protected Attributes</h2></td></tr>
<tr class="memitem:ae1d43a6f8bee9f364bea98c12662e966"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1String.html">String</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DocumentIdentifier.html#ae1d43a6f8bee9f364bea98c12662e966">id_</a></td></tr>
<tr class="memdesc:ae1d43a6f8bee9f364bea98c12662e966"><td class="mdescLeft"> </td><td class="mdescRight">the ID (e.g. LSID) <a href="#ae1d43a6f8bee9f364bea98c12662e966">More...</a><br/></td></tr>
<tr class="separator:ae1d43a6f8bee9f364bea98c12662e966"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:acb68b342f99bac716f72c8d48bb1f517"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1String.html">String</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DocumentIdentifier.html#acb68b342f99bac716f72c8d48bb1f517">file_path_</a></td></tr>
<tr class="memdesc:acb68b342f99bac716f72c8d48bb1f517"><td class="mdescLeft"> </td><td class="mdescRight">the path to the loaded file <a href="#acb68b342f99bac716f72c8d48bb1f517">More...</a><br/></td></tr>
<tr class="separator:acb68b342f99bac716f72c8d48bb1f517"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:ae997e7676ba9c8429217e6b94c377ece"><td class="memItemLeft" align="right" valign="top"><a class="el" href="structOpenMS_1_1FileTypes.html#a1d1cfd8ffb84e947f82999c682b666a7">FileTypes::Type</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DocumentIdentifier.html#ae997e7676ba9c8429217e6b94c377ece">file_type_</a></td></tr>
<tr class="memdesc:ae997e7676ba9c8429217e6b94c377ece"><td class="mdescLeft"> </td><td class="mdescRight">the type of the loaded file <a href="#ae997e7676ba9c8429217e6b94c377ece">More...</a><br/></td></tr>
<tr class="separator:ae997e7676ba9c8429217e6b94c377ece"><td class="memSeparator" colspan="2"> </td></tr>
</table>
<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
<div class="textblock"><p>Manage source document information. </p>
<p>This class stored information about the source document. Primarily this is the document id e.g. a LSID.</p>
<p>For source files additional information can be stored:</p>
<ul>
<li>file name</li>
<li>file type </li>
</ul>
</div><h2 class="groupheader">Constructor & Destructor Documentation</h2>
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<td class="memname"><a class="el" href="classOpenMS_1_1DocumentIdentifier.html">DocumentIdentifier</a> </td>
<td>(</td>
<td class="paramname"></td><td>)</td>
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<p>default constructor </p>
<p>Referenced by <a class="el" href="classOpenMS_1_1FeatureMap.html#a7b5660c6199fa9d5fef65974c7e3e733">FeatureMap< OpenMS::Feature >::clear()</a>.</p>
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<td class="memname"><a class="el" href="classOpenMS_1_1DocumentIdentifier.html">DocumentIdentifier</a> </td>
<td>(</td>
<td class="paramtype">const <a class="el" href="classOpenMS_1_1DocumentIdentifier.html">DocumentIdentifier</a> & </td>
<td class="paramname"><em>source</em></td><td>)</td>
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<p>Copy constructor. </p>
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<td class="memname">virtual ~<a class="el" href="classOpenMS_1_1DocumentIdentifier.html">DocumentIdentifier</a> </td>
<td>(</td>
<td class="paramname"></td><td>)</td>
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<span class="mlabels"><span class="mlabel">virtual</span></span> </td>
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<p>destructor </p>
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<h2 class="groupheader">Member Function Documentation</h2>
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<td class="memname">const <a class="el" href="classOpenMS_1_1String.html">String</a>& getIdentifier </td>
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<td> const</td>
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<p>retrieve document identifier (e.g. an LSID) </p>
<p>Referenced by <a class="el" href="classOpenMS_1_1FeatureMap.html#a6d9d2f709e76acc61c5a869bd4f755c8">FeatureMap< OpenMS::Feature >::operator+=()</a>.</p>
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<td class="memname">const <a class="el" href="classOpenMS_1_1String.html">String</a>& getLoadedFilePath </td>
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<td class="paramname"></td><td>)</td>
<td> const</td>
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<p>get the file_name_ which is the absolute path to the file loaded from </p>
<p>Referenced by <a class="el" href="classOpenMS_1_1OpenSwathHelper.html#a58f5957aa8b970648d7cb611c76ed0f9">OpenSwathHelper::checkSwathMapAndSelectTransitions()</a>.</p>
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<td class="memname">const <a class="el" href="structOpenMS_1_1FileTypes.html#a1d1cfd8ffb84e947f82999c682b666a7">FileTypes::Type</a>& getLoadedFileType </td>
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<p>get the file_type (e.g. featureXML, consensusXML, mzData, mzXML, mzML, ...) of the file loaded from </p>
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<td class="memname"><a class="el" href="classOpenMS_1_1DocumentIdentifier.html">DocumentIdentifier</a>& operator= </td>
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<p>Assignment operator. </p>
<p>Referenced by <a class="el" href="classOpenMS_1_1FeatureMap.html#a7b5660c6199fa9d5fef65974c7e3e733">FeatureMap< OpenMS::Feature >::clear()</a>, <a class="el" href="classOpenMS_1_1FeatureMap.html#a6d9d2f709e76acc61c5a869bd4f755c8">FeatureMap< OpenMS::Feature >::operator+=()</a>, and <a class="el" href="classOpenMS_1_1FeatureMap.html#a23b5a9e6646cda6ec189c83575a1c770">FeatureMap< OpenMS::Feature >::operator=()</a>.</p>
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<td class="memname">bool operator== </td>
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<td class="paramtype">const <a class="el" href="classOpenMS_1_1DocumentIdentifier.html">DocumentIdentifier</a> & </td>
<td class="paramname"><em>rhs</em></td><td>)</td>
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<p>Equality operator. </p>
<p>Referenced by <a class="el" href="classOpenMS_1_1FeatureMap.html#a18cf03155b291a1bda26fbe431431788">FeatureMap< OpenMS::Feature >::operator==()</a>.</p>
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<td class="memname">void setIdentifier </td>
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<td class="paramtype">const <a class="el" href="classOpenMS_1_1String.html">String</a> & </td>
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<p>set document identifier (e.g. an LSID) </p>
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<td class="memname">void setLoadedFilePath </td>
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<td class="paramname"><em>file_name</em></td><td>)</td>
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<p>set the file_name_ according to absolute path of the file loaded from preferably done whilst loading </p>
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<td class="memname">void setLoadedFileType </td>
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<td class="paramtype">const <a class="el" href="classOpenMS_1_1String.html">String</a> & </td>
<td class="paramname"><em>file_name</em></td><td>)</td>
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<p>set the file_type according to the type of the file loaded from (see FileHandler::Type) preferably done whilst loading </p>
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<td class="memname">void swap </td>
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<td class="paramtype"><a class="el" href="classOpenMS_1_1DocumentIdentifier.html">DocumentIdentifier</a> & </td>
<td class="paramname"><em>from</em></td><td>)</td>
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<p>exchange content with <code>from</code> </p>
<p>Referenced by <a class="el" href="classOpenMS_1_1FeatureMap.html#a7ade52218357ec67a4f7a6bc71041e85">FeatureMap< OpenMS::Feature >::swap()</a>.</p>
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<h2 class="groupheader">Member Data Documentation</h2>
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<td class="memname"><a class="el" href="classOpenMS_1_1String.html">String</a> file_path_</td>
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<p>the path to the loaded file </p>
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<td class="memname"><a class="el" href="structOpenMS_1_1FileTypes.html#a1d1cfd8ffb84e947f82999c682b666a7">FileTypes::Type</a> file_type_</td>
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<span class="mlabels"><span class="mlabel">protected</span></span> </td>
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<p>the type of the loaded file </p>
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<td class="memname"><a class="el" href="classOpenMS_1_1String.html">String</a> id_</td>
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<p>the ID (e.g. LSID) </p>
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<TD><font color="#c0c0c0">OpenMS / TOPP release 1.11.1</font></TD>
<TD align="right"><font color="#c0c0c0">Documentation generated on Thu Nov 14 2013 11:19:32 using doxygen 1.8.5</font></TD>
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