File: classOpenMS_1_1Modification-members.html

package info (click to toggle)
openms 1.11.1-5
links: PTS, VCS
area: main
in suites: jessie, jessie-kfreebsd
size: 436,688 kB
ctags: 150,907
sloc: cpp: 387,126; xml: 71,547; python: 7,764; ansic: 2,626; php: 2,499; sql: 737; ruby: 342; sh: 325; makefile: 128
file content (95 lines) | stat: -rw-r--r-- 18,432 bytes
<HTML>
<HEAD>
<TITLE>Member List</TITLE>
<LINK HREF="doxygen.css" REL="stylesheet" TYPE="text/css">
<LINK HREF="style_ini.css" REL="stylesheet" TYPE="text/css">
</HEAD>
<BODY BGCOLOR="#FFFFFF">
<A href="index.html">Home</A> &nbsp;&middot;
<A href="classes.html">Classes</A> &nbsp;&middot;
<A href="annotated.html">Annotated Classes</A> &nbsp;&middot;
<A href="modules.html">Modules</A> &nbsp;&middot;
<A href="functions_func.html">Members</A> &nbsp;&middot;
<A href="namespaces.html">Namespaces</A> &nbsp;&middot;
<A href="pages.html">Related Pages</A>
<HR style="height:1px; border:none; border-top:1px solid #c0c0c0;">
<!-- Generated by Doxygen 1.8.5 -->
<div id="nav-path" class="navpath">
  <ul>
<li class="navelem"><a class="el" href="namespaceOpenMS.html">OpenMS</a></li><li class="navelem"><a class="el" href="classOpenMS_1_1Modification.html">Modification</a></li>  </ul>
</div>
</div><!-- top -->
<div class="header">
  <div class="headertitle">
<div class="title">Modification Member List</div>  </div>
</div><!--header-->
<div class="contents">

<p>This is the complete list of members for <a class="el" href="classOpenMS_1_1Modification.html">Modification</a>, including all inherited members.</p>
<table class="directory">
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html#a60e47d0643ba030a4c13c4b3e7788d7fadf8e3bb19d1b4de18399b64a58a39590">AA</a> enum value</td><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html">Modification</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html#a60e47d0643ba030a4c13c4b3e7788d7faaf5309a6b44d50c2108ebeb56ff66924">AA_AT_CTERM</a> enum value</td><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html">Modification</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html#a60e47d0643ba030a4c13c4b3e7788d7fa36c755c9d424687a052d8d52f98f9492">AA_AT_NTERM</a> enum value</td><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html">Modification</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html#a489bd9122ead366ab01e4baad8c4fbd8">affected_amino_acids_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html">Modification</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html#ae5b77ecfe9182ebd648d54ca1137eba0">clearMetaInfo</a>()</td><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html">MetaInfoInterface</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html#ad547684b6281c785fb4e9aa33cf1f859">clone</a>() const </td><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html">Modification</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1SampleTreatment.html#a0476ea2b66eba99318ede9591a223f64">comment_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1SampleTreatment.html">SampleTreatment</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html#a23bcf7d2c2357d11e1363dfe44057037">createIfNotExists_</a>()</td><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html">MetaInfoInterface</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">protected</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html#a60e47d0643ba030a4c13c4b3e7788d7fa8d9f1e0e3c9435a03680b960f327744d">CTERM</a> enum value</td><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html">Modification</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html#ae2b7f54d12a4780ccda001d749ef01de">getAffectedAminoAcids</a>() const </td><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html">Modification</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1SampleTreatment.html#af974151b7df6fcfeb6509e26431dcaa0">getComment</a>() const </td><td class="entry"><a class="el" href="classOpenMS_1_1SampleTreatment.html">SampleTreatment</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html#aaefa2a4a5d50f899cdd82d686104d164">getKeys</a>(std::vector&lt; String &gt; &amp;keys) const </td><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html">MetaInfoInterface</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html#a121b22fe4dd05ef9fc4160bd52e9bd0b">getKeys</a>(std::vector&lt; UInt &gt; &amp;keys) const </td><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html">MetaInfoInterface</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html#a51e7ec6e73028e6e0f073b01382bcaea">getMass</a>() const </td><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html">Modification</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html#aae35ae2dfad88d673b03c787aafca83d">getMetaValue</a>(const String &amp;name) const </td><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html">MetaInfoInterface</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html#ae9b2516ea1331df63e4fc098c16b50e3">getMetaValue</a>(UInt index) const </td><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html">MetaInfoInterface</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html#a04df2118da1f5d5d4d57ec9fbba992b7">getReagentName</a>() const </td><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html">Modification</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html#a801521e31378e952afbfe933d29b1844">getSpecificityType</a>() const </td><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html">Modification</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1SampleTreatment.html#aa23b352e29bc8e7bbc2d870b90f28760">getType</a>() const </td><td class="entry"><a class="el" href="classOpenMS_1_1SampleTreatment.html">SampleTreatment</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html#a001483d1f67f068e585f10d9abcc487d">isMetaEmpty</a>() const </td><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html">MetaInfoInterface</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html#ac0c786325cbcf73a4146acd843b3e404">mass_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html">Modification</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html#a07ce72f4d24f650fcdbba3801e1b8f59">meta_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html">MetaInfoInterface</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html#a4adf02f403d7b972e7e6a58e938ecb6c">MetaInfoInterface</a>()</td><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html">MetaInfoInterface</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html#ae216eb0aa3192b67d70da8c461583256">MetaInfoInterface</a>(const MetaInfoInterface &amp;rhs)</td><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html">MetaInfoInterface</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html#adc0992991f912788ed14e72b6f62b2dd">metaRegistry</a>()</td><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html">MetaInfoInterface</a></td><td class="entry"><span class="mlabel">static</span></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html#acabf8a0e3c40224df62b282a5ce0318f">metaValueExists</a>(const String &amp;name) const </td><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html">MetaInfoInterface</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html#aabf87daa46e081dd9584d4987d2206f6">metaValueExists</a>(UInt index) const </td><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html">MetaInfoInterface</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html#ab259c1021051a89bcc1fbf56a12f3902">Modification</a>()</td><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html">Modification</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html#a60807ea8c321c9bde48fcf7406437e4c">Modification</a>(const Modification &amp;)</td><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html">Modification</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html#a22ebde2b35a6b53e9594e5a8170a46ba">NamesOfSpecificityType</a></td><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html">Modification</a></td><td class="entry"><span class="mlabel">static</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html#a60e47d0643ba030a4c13c4b3e7788d7faa4dbd6326cac52ce26d19cded6742c88">NTERM</a> enum value</td><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html">Modification</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html#aabdb6bf51d554dba98617e3f7609c6cf">operator!=</a>(const MetaInfoInterface &amp;rhs) const </td><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html">MetaInfoInterface</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html#a6685ae65405d6806d63040463fad4806">operator=</a>(const Modification &amp;)</td><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html">Modification</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1SampleTreatment.html#a35ebf180fb2837146f652941924655f4">OpenMS::SampleTreatment::operator=</a>(const SampleTreatment &amp;)</td><td class="entry"><a class="el" href="classOpenMS_1_1SampleTreatment.html">SampleTreatment</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html#a0b7e858982ccb9d37b01971e6cd43596">OpenMS::MetaInfoInterface::operator=</a>(const MetaInfoInterface &amp;rhs)</td><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html">MetaInfoInterface</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html#a095ceaebeabcb4884eda7bef0039012d">operator==</a>(const SampleTreatment &amp;rhs) const </td><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html">Modification</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html#ae1233471a3265a00a5edef4017ee8f20">OpenMS::MetaInfoInterface::operator==</a>(const MetaInfoInterface &amp;rhs) const </td><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html">MetaInfoInterface</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html#a59b3681515233e08429369def98268da">reagent_name_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html">Modification</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html#aac68103b8336fa854cf4c59f8bd6cff8">removeMetaValue</a>(const String &amp;name)</td><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html">MetaInfoInterface</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html#a3a8a7da0f5e71d3b96ea902c29bcf632">removeMetaValue</a>(UInt index)</td><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html">MetaInfoInterface</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1SampleTreatment.html#add876bbcecf14ebd488fbdea876c6ddf">SampleTreatment</a>(const String &amp;type)</td><td class="entry"><a class="el" href="classOpenMS_1_1SampleTreatment.html">SampleTreatment</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1SampleTreatment.html#a67757cac504d89a0bc210a50a29fd9cf">SampleTreatment</a>(const SampleTreatment &amp;)</td><td class="entry"><a class="el" href="classOpenMS_1_1SampleTreatment.html">SampleTreatment</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html#a72a78e4bd735aef8c1c7ff48328880f9">setAffectedAminoAcids</a>(const String &amp;affected_amino_acids)</td><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html">Modification</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1SampleTreatment.html#a2116f9b1dde8ba3aef4a07e6f2a970a7">setComment</a>(const String &amp;comment)</td><td class="entry"><a class="el" href="classOpenMS_1_1SampleTreatment.html">SampleTreatment</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html#a984d3ffb17a84b059acea63b11177c92">setMass</a>(DoubleReal mass)</td><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html">Modification</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html#a135a7e818125b31198a8a65d9ac7a3d1">setMetaValue</a>(const String &amp;name, const DataValue &amp;value)</td><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html">MetaInfoInterface</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html#abbb9d3ebe8c7c3f6a9ed131faa8cf2c9">setMetaValue</a>(UInt index, const DataValue &amp;value)</td><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html">MetaInfoInterface</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html#a027f65199eb3338f8a0ddc04e1c815d5">setReagentName</a>(const String &amp;reagent_name)</td><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html">Modification</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html#a7a0ebaba908900aeb0423d6de1090df0">setSpecificityType</a>(const SpecificityType &amp;specificity_type)</td><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html">Modification</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html#a60e47d0643ba030a4c13c4b3e7788d7faa8fb00b1e5aed46b944ccd5bd9eaac70">SIZE_OF_SPECIFICITYTYPE</a> enum value</td><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html">Modification</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html#ae1c8cd5f3264845b16200d4224d95d04">specificity_type_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html">Modification</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html#a60e47d0643ba030a4c13c4b3e7788d7f">SpecificityType</a> enum name</td><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html">Modification</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1SampleTreatment.html#a0bfd23e2ac1b1a4933438d6080550d5f">type_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1SampleTreatment.html">SampleTreatment</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html#a30c6469ab28a1ae578b23109f8b931c6">~MetaInfoInterface</a>()</td><td class="entry"><a class="el" href="classOpenMS_1_1MetaInfoInterface.html">MetaInfoInterface</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html#ab4c74edf72a6cc4f9fb75f2a26e44740">~Modification</a>()</td><td class="entry"><a class="el" href="classOpenMS_1_1Modification.html">Modification</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1SampleTreatment.html#a707d5be10451aa1131d77f719963741c">~SampleTreatment</a>()</td><td class="entry"><a class="el" href="classOpenMS_1_1SampleTreatment.html">SampleTreatment</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
</table></div><!-- contents -->
<HR style="height:1px; border:none; border-top:1px solid #c0c0c0;">
<TABLE width="100%" border="0">
<TR>
<TD><font color="#c0c0c0">OpenMS / TOPP release 1.11.1</font></TD>
<TD align="right"><font color="#c0c0c0">Documentation generated on Thu Nov 14 2013 11:19:33 using doxygen 1.8.5</font></TD>
</TR>
</TABLE>
</BODY>
</HTML>