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<li class="navelem"><a class="el" href="namespaceOpenMS.html">OpenMS</a></li><li class="navelem"><a class="el" href="classOpenMS_1_1ModificationsDB.html">ModificationsDB</a></li>  </ul>
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<div class="title">ModificationsDB Member List</div>  </div>
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<p>This is the complete list of members for <a class="el" href="classOpenMS_1_1ModificationsDB.html">ModificationsDB</a>, including all inherited members.</p>
<table class="directory">
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html#a4b64f291c6984212937e1bc24386e4d4">findModificationIndex</a>(const String &amp;mod_name) const </td><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html">ModificationsDB</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html#a7a1feeda47255b2fdbcaadcc5a701f82">getAllSearchModifications</a>(std::vector&lt; String &gt; &amp;modifications)</td><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html">ModificationsDB</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html#a04aaafa9c3d6d2b60e0ba4febd479afa">getInstance</a>()</td><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html">ModificationsDB</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">static</span></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html#a83dcbd7933f3542a0ea2ef262ab5f8a5">getModification</a>(Size index) const </td><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html">ModificationsDB</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html#a34496b7f985662d33f1e88ba6f88e6cb">getModification</a>(const String &amp;residue_name, const String &amp;mod_name, ResidueModification::Term_Specificity term_spec) const </td><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html">ModificationsDB</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html#ae83949b14fe95cac0d95ca65756e3e7a">getModification</a>(const String &amp;modification) const </td><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html">ModificationsDB</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html#a1e7718f1bec3c101a0fa68bfb8636ee7">getModificationsByDiffMonoMass</a>(std::vector&lt; String &gt; &amp;mods, DoubleReal mass, DoubleReal error=0.0)</td><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html">ModificationsDB</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html#aabae46f11c71191c6f78b9112acfd3e1">getModificationsByDiffMonoMass</a>(std::vector&lt; String &gt; &amp;mods, const String &amp;residue, DoubleReal mass, DoubleReal error=0.0)</td><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html">ModificationsDB</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html#a9093aa103751307fb7fc728347d6606e">getNumberOfModifications</a>() const </td><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html">ModificationsDB</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html#a4b793d1854764d305b4442da37f1f290">getTerminalModification</a>(const String &amp;name, ResidueModification::Term_Specificity term_spec) const </td><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html">ModificationsDB</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html#a1118e67567825704b789854be63ba403">getTerminalModificationsByDiffMonoMass</a>(std::vector&lt; String &gt; &amp;mods, DoubleReal mass, DoubleReal error, ResidueModification::Term_Specificity term_spec)</td><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html">ModificationsDB</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html#ae16d02b0300813ccf6eba817104c9476">modification_names_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html">ModificationsDB</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html#a18c8a57601b44e5fe915ceea331fe98e">ModificationsDB</a>()</td><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html">ModificationsDB</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html#acec82630547c7d865ec8df0aac26b42e">ModificationsDB</a>(const ModificationsDB &amp;residue_db)</td><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html">ModificationsDB</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html#aeafe4e138db0cd068ed93c7804d190ec">mods_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html">ModificationsDB</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html#a317d773d08184d65d7317bb3cf68180e">operator=</a>(const ModificationsDB &amp;aa)</td><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html">ModificationsDB</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html#ad61359c1ef928c821fe38733432ad59a">readFromOBOFile</a>(const String &amp;filename)</td><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html">ModificationsDB</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html#a8ccca38c63a00dc1199a36081c494823">readFromUnimodXMLFile</a>(const String &amp;filename)</td><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html">ModificationsDB</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html#a29efc7a8f2b8179bc2748188bd229e04">searchModifications</a>(std::set&lt; const ResidueModification * &gt; &amp;mods, const String &amp;orgin, const String &amp;mod_name, ResidueModification::Term_Specificity term_spec) const </td><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html">ModificationsDB</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html#aec8057c4a55477f29d135960314a7546">searchModifications</a>(std::set&lt; const ResidueModification * &gt; &amp;mods, const String &amp;mod_name, ResidueModification::Term_Specificity term_spec) const </td><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html">ModificationsDB</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html#a4ade554a9fd87c5c8c8fce6de028a9fa">searchTerminalModifications</a>(std::set&lt; const ResidueModification * &gt; &amp;mods, const String &amp;name, ResidueModification::Term_Specificity term_spec) const </td><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html">ModificationsDB</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html#a966e95f08956b3c490051048011eadf5">~ModificationsDB</a>()</td><td class="entry"><a class="el" href="classOpenMS_1_1ModificationsDB.html">ModificationsDB</a></td><td class="entry"><span class="mlabel">private</span><span class="mlabel">virtual</span></td></tr>
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<TD><font color="#c0c0c0">OpenMS / TOPP release 1.11.1</font></TD>
<TD align="right"><font color="#c0c0c0">Documentation generated on Thu Nov 14 2013 11:19:27 using doxygen 1.8.5</font></TD>
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