1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53
|
<HTML>
<HEAD>
<TITLE>Member List</TITLE>
<LINK HREF="doxygen.css" REL="stylesheet" TYPE="text/css">
<LINK HREF="style_ini.css" REL="stylesheet" TYPE="text/css">
</HEAD>
<BODY BGCOLOR="#FFFFFF">
<A href="index.html">Home</A> ·
<A href="classes.html">Classes</A> ·
<A href="annotated.html">Annotated Classes</A> ·
<A href="modules.html">Modules</A> ·
<A href="functions_func.html">Members</A> ·
<A href="namespaces.html">Namespaces</A> ·
<A href="pages.html">Related Pages</A>
<HR style="height:1px; border:none; border-top:1px solid #c0c0c0;">
<!-- Generated by Doxygen 1.8.5 -->
<div id="nav-path" class="navpath">
<ul>
<li class="navelem"><a class="el" href="namespaceOpenMS.html">OpenMS</a></li><li class="navelem"><a class="el" href="classOpenMS_1_1PSProteinInference.html">PSProteinInference</a></li> </ul>
</div>
</div><!-- top -->
<div class="header">
<div class="headertitle">
<div class="title">PSProteinInference Member List</div> </div>
</div><!--header-->
<div class="contents">
<p>This is the complete list of members for <a class="el" href="classOpenMS_1_1PSProteinInference.html">PSProteinInference</a>, including all inherited members.</p>
<table class="directory">
<tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1PSProteinInference.html#a8280b9abe91947803b2cc97843dfa528">accessions_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1PSProteinInference.html">PSProteinInference</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
<tr><td class="entry"><a class="el" href="classOpenMS_1_1PSProteinInference.html#a5fe50581933d62f5c82af2b093ac18e6">calculateProteinProbabilities</a>(const std::vector< PeptideIdentification > &ids)</td><td class="entry"><a class="el" href="classOpenMS_1_1PSProteinInference.html">PSProteinInference</a></td><td class="entry"></td></tr>
<tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1PSProteinInference.html#ae08ce4bfa4284b890472cf457d158370">findMinimalProteinList</a>(const std::vector< PeptideIdentification > &peptide_ids)</td><td class="entry"><a class="el" href="classOpenMS_1_1PSProteinInference.html">PSProteinInference</a></td><td class="entry"></td></tr>
<tr><td class="entry"><a class="el" href="classOpenMS_1_1PSProteinInference.html#af5c8fbca9986a886f46fb7614483219d">getNumberOfProtIds</a>(DoubleReal protein_id_threshold)</td><td class="entry"><a class="el" href="classOpenMS_1_1PSProteinInference.html">PSProteinInference</a></td><td class="entry"></td></tr>
<tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1PSProteinInference.html#ae2b7b99ca96aa2345379c9cbae30ab73">getNumberOfProtIdsPeptideRule</a>(Int min_peptides, std::map< String, std::set< String > > &prot_id_counter)</td><td class="entry"><a class="el" href="classOpenMS_1_1PSProteinInference.html">PSProteinInference</a></td><td class="entry"></td></tr>
<tr><td class="entry"><a class="el" href="classOpenMS_1_1PSProteinInference.html#af217488cbb1cecf0e2d55c6e3650c5e2">getProteinProbability</a>(const String &acc)</td><td class="entry"><a class="el" href="classOpenMS_1_1PSProteinInference.html">PSProteinInference</a></td><td class="entry"></td></tr>
<tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1PSProteinInference.html#acee115c9fb8e23902ba78e6d2da38770">getSolver</a>()</td><td class="entry"><a class="el" href="classOpenMS_1_1PSProteinInference.html">PSProteinInference</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
<tr><td class="entry"><a class="el" href="classOpenMS_1_1PSProteinInference.html#a40691fd5e2ad1822cf45610e487cbb6c">isProteinInMinimalList</a>(const String &acc)</td><td class="entry"><a class="el" href="classOpenMS_1_1PSProteinInference.html">PSProteinInference</a></td><td class="entry"></td></tr>
<tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1PSProteinInference.html#a19130cce367c9187bfbb910e14ce7d96">minimal_protein_list_accessions_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1PSProteinInference.html">PSProteinInference</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
<tr><td class="entry"><a class="el" href="classOpenMS_1_1PSProteinInference.html#a7d48d1ed1026fb697b8eb66612d84f24">probabilities_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1PSProteinInference.html">PSProteinInference</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
<tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1PSProteinInference.html#aafeee9366a8363b68890704ab91faacf">PSProteinInference</a>()</td><td class="entry"><a class="el" href="classOpenMS_1_1PSProteinInference.html">PSProteinInference</a></td><td class="entry"></td></tr>
<tr><td class="entry"><a class="el" href="classOpenMS_1_1PSProteinInference.html#ab27586cdb7a46ebbb7f2e8f5cc8c5677">setSolver</a>(LPWrapper::SOLVER solver)</td><td class="entry"><a class="el" href="classOpenMS_1_1PSProteinInference.html">PSProteinInference</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
<tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1PSProteinInference.html#afb8f1202d548f01394d85fbeb51f9adf">solver_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1PSProteinInference.html">PSProteinInference</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
<tr><td class="entry"><a class="el" href="classOpenMS_1_1PSProteinInference.html#a9ba8777fb8b161c2c1495ab5693e0104">~PSProteinInference</a>()</td><td class="entry"><a class="el" href="classOpenMS_1_1PSProteinInference.html">PSProteinInference</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
</table></div><!-- contents -->
<HR style="height:1px; border:none; border-top:1px solid #c0c0c0;">
<TABLE width="100%" border="0">
<TR>
<TD><font color="#c0c0c0">OpenMS / TOPP release 1.11.1</font></TD>
<TD align="right"><font color="#c0c0c0">Documentation generated on Thu Nov 14 2013 11:19:27 using doxygen 1.8.5</font></TD>
</TR>
</TABLE>
</BODY>
</HTML>
|