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<HTML>
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<TITLE>SimpleSeeder< PeakType, FeatureType > Class Template Reference</TITLE>
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<li class="navelem"><a class="el" href="namespaceOpenMS.html">OpenMS</a></li><li class="navelem"><a class="el" href="classOpenMS_1_1SimpleSeeder.html">SimpleSeeder</a></li> </ul>
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<a href="#pub-types">Public Types</a> |
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<div class="title">SimpleSeeder< PeakType, FeatureType > Class Template Reference<div class="ingroups"><a class="el" href="group__FeatureFinder.html">FeatureFinder</a></div></div> </div>
</div><!--header-->
<div class="contents">
<p>Simple seeding class that uses the strongest peak as next seed.
<a href="classOpenMS_1_1SimpleSeeder.html#details">More...</a></p>
<p><code>#include <<a class="el" href="SimpleSeeder_8h_source.html">OpenMS/TRANSFORMATIONS/FEATUREFINDER/SimpleSeeder.h</a>></code></p>
<div class="dynheader">
Inheritance diagram for SimpleSeeder< PeakType, FeatureType >:</div>
<div class="dyncontent">
<div class="center">
<img src="classOpenMS_1_1SimpleSeeder.png" usemap="#SimpleSeeder< PeakType, FeatureType >_map" alt=""/>
<map id="SimpleSeeder< PeakType, FeatureType >_map" name="SimpleSeeder< PeakType, FeatureType >_map">
<area href="classOpenMS_1_1FeaFiModule.html" title="Implements a module of the FeatureFinder algorithm. " alt="FeaFiModule< PeakType, FeatureType >" shape="rect" coords="0,56,251,80"/>
<area href="structOpenMS_1_1FeatureFinderDefs.html" title="The purpose of this struct is to provide definitions of classes and typedefs which are used throughou..." alt="FeatureFinderDefs" shape="rect" coords="261,56,512,80"/>
<area href="classOpenMS_1_1DefaultParamHandler.html" title="A base class for all classes handling default parameters. " alt="DefaultParamHandler" shape="rect" coords="0,0,251,24"/>
</map>
</div></div>
<table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pub-types"></a>
Public Types</h2></td></tr>
<tr class="memitem:a79ea228cdc8755284e64dd9f625170a3"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="classOpenMS_1_1FeaFiModule.html">FeaFiModule</a>< <a class="el" href="namespaceOpenMS.html#a013338b7bdbb5c3b4c78666656070e23">PeakType</a>, <br class="typebreak"/>
FeatureType > </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1SimpleSeeder.html#a79ea228cdc8755284e64dd9f625170a3">Base</a></td></tr>
<tr class="separator:a79ea228cdc8755284e64dd9f625170a3"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:adf6f376e844058d129ce8ba868276643"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="classOpenMS_1_1MSExperiment.html">MSExperiment</a>< <a class="el" href="namespaceOpenMS.html#a013338b7bdbb5c3b4c78666656070e23">PeakType</a> > </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1SimpleSeeder.html#adf6f376e844058d129ce8ba868276643">MapType</a></td></tr>
<tr class="separator:adf6f376e844058d129ce8ba868276643"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="inherit_header pub_types_classOpenMS_1_1FeaFiModule"><td colspan="2" onclick="javascript:toggleInherit('pub_types_classOpenMS_1_1FeaFiModule')"><img src="closed.png" alt="-"/> Public Types inherited from <a class="el" href="classOpenMS_1_1FeaFiModule.html">FeaFiModule< PeakType, FeatureType ></a></td></tr>
<tr class="memitem:a21ea3968c35235b6b3cd78a2190280d9 inherit pub_types_classOpenMS_1_1FeaFiModule"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="classOpenMS_1_1FeatureMap.html">FeatureMap</a>< FeatureType > </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1FeaFiModule.html#a21ea3968c35235b6b3cd78a2190280d9">FeatureMapType</a></td></tr>
<tr class="memdesc:a21ea3968c35235b6b3cd78a2190280d9 inherit pub_types_classOpenMS_1_1FeaFiModule"><td class="mdescLeft"> </td><td class="mdescRight">Output feature map type. <a href="#a21ea3968c35235b6b3cd78a2190280d9">More...</a><br/></td></tr>
<tr class="separator:a21ea3968c35235b6b3cd78a2190280d9 inherit pub_types_classOpenMS_1_1FeaFiModule"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:adf6f376e844058d129ce8ba868276643 inherit pub_types_classOpenMS_1_1FeaFiModule"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="classOpenMS_1_1MSExperiment.html">MSExperiment</a>< <a class="el" href="namespaceOpenMS.html#a013338b7bdbb5c3b4c78666656070e23">PeakType</a> > </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1FeaFiModule.html#adf6f376e844058d129ce8ba868276643">MapType</a></td></tr>
<tr class="memdesc:adf6f376e844058d129ce8ba868276643 inherit pub_types_classOpenMS_1_1FeaFiModule"><td class="mdescLeft"> </td><td class="mdescRight">Input map type. <a href="#adf6f376e844058d129ce8ba868276643">More...</a><br/></td></tr>
<tr class="separator:adf6f376e844058d129ce8ba868276643 inherit pub_types_classOpenMS_1_1FeaFiModule"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:ae4e0f0c176662a323a6a64d29ff986dd inherit pub_types_classOpenMS_1_1FeaFiModule"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="classOpenMS_1_1MSExperiment.html#a066042ae14211da37d4fa66d466bfa3e">MapType::SpectrumType</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1FeaFiModule.html#ae4e0f0c176662a323a6a64d29ff986dd">SpectrumType</a></td></tr>
<tr class="memdesc:ae4e0f0c176662a323a6a64d29ff986dd inherit pub_types_classOpenMS_1_1FeaFiModule"><td class="mdescLeft"> </td><td class="mdescRight">Input spectrum type. <a href="#ae4e0f0c176662a323a6a64d29ff986dd">More...</a><br/></td></tr>
<tr class="separator:ae4e0f0c176662a323a6a64d29ff986dd inherit pub_types_classOpenMS_1_1FeaFiModule"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a221361082f641c3fccc58e9bc66aeee1 inherit pub_types_classOpenMS_1_1FeaFiModule"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="classOpenMS_1_1Peak2D.html#a4a8c5b2adc05e9ff96a007385bfe9b47">PeakType::IntensityType</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1FeaFiModule.html#a221361082f641c3fccc58e9bc66aeee1">IntensityType</a></td></tr>
<tr class="memdesc:a221361082f641c3fccc58e9bc66aeee1 inherit pub_types_classOpenMS_1_1FeaFiModule"><td class="mdescLeft"> </td><td class="mdescRight">Input intensity type. <a href="#a221361082f641c3fccc58e9bc66aeee1">More...</a><br/></td></tr>
<tr class="separator:a221361082f641c3fccc58e9bc66aeee1 inherit pub_types_classOpenMS_1_1FeaFiModule"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a181486a43da338e31f089df7661f50bb inherit pub_types_classOpenMS_1_1FeaFiModule"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="classOpenMS_1_1Peak2D.html#a063d40a3528749f1a905ab04d76387e0">PeakType::CoordinateType</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1FeaFiModule.html#a181486a43da338e31f089df7661f50bb">CoordinateType</a></td></tr>
<tr class="memdesc:a181486a43da338e31f089df7661f50bb inherit pub_types_classOpenMS_1_1FeaFiModule"><td class="mdescLeft"> </td><td class="mdescRight">Input coordinate type. <a href="#a181486a43da338e31f089df7661f50bb">More...</a><br/></td></tr>
<tr class="separator:a181486a43da338e31f089df7661f50bb inherit pub_types_classOpenMS_1_1FeaFiModule"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="inherit_header pub_types_structOpenMS_1_1FeatureFinderDefs"><td colspan="2" onclick="javascript:toggleInherit('pub_types_structOpenMS_1_1FeatureFinderDefs')"><img src="closed.png" alt="-"/> Public Types inherited from <a class="el" href="structOpenMS_1_1FeatureFinderDefs.html">FeatureFinderDefs</a></td></tr>
<tr class="memitem:a3f3de3e0d751949b8d0b60ffb302944a inherit pub_types_structOpenMS_1_1FeatureFinderDefs"><td class="memItemLeft" align="right" valign="top">enum  </td><td class="memItemRight" valign="bottom"><a class="el" href="structOpenMS_1_1FeatureFinderDefs.html#a3f3de3e0d751949b8d0b60ffb302944a">Flag</a> { <a class="el" href="structOpenMS_1_1FeatureFinderDefs.html#a3f3de3e0d751949b8d0b60ffb302944aaa09b651ef326a9d8efcee5cc5b720ab4">UNUSED</a>,
<a class="el" href="structOpenMS_1_1FeatureFinderDefs.html#a3f3de3e0d751949b8d0b60ffb302944aa1e780c62cb3fd2edcac39f739bbe6f6c">USED</a>
}</td></tr>
<tr class="memdesc:a3f3de3e0d751949b8d0b60ffb302944a"><td class="mdescLeft"> </td><td class="mdescRight">Flags that indicate if a peak is already used in a feature. <a href="structOpenMS_1_1FeatureFinderDefs.html#a3f3de3e0d751949b8d0b60ffb302944a">More...</a><br/></td></tr>
<tr class="separator:a3f3de3e0d751949b8d0b60ffb302944a inherit pub_types_structOpenMS_1_1FeatureFinderDefs"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:aaee0bfd850887fdc58115cead9e9b8b9 inherit pub_types_structOpenMS_1_1FeatureFinderDefs"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="structOpenMS_1_1IsotopeCluster.html#a0cab124671a3ada269f0553e1c8934da">IsotopeCluster::IndexPair</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="structOpenMS_1_1FeatureFinderDefs.html#aaee0bfd850887fdc58115cead9e9b8b9">IndexPair</a></td></tr>
<tr class="memdesc:aaee0bfd850887fdc58115cead9e9b8b9 inherit pub_types_structOpenMS_1_1FeatureFinderDefs"><td class="mdescLeft"> </td><td class="mdescRight">Index to peak consisting of two UInts (scan index / peak index) <a href="#aaee0bfd850887fdc58115cead9e9b8b9">More...</a><br/></td></tr>
<tr class="separator:aaee0bfd850887fdc58115cead9e9b8b9 inherit pub_types_structOpenMS_1_1FeatureFinderDefs"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:af01a99958d0b18999737158daf8820ac inherit pub_types_structOpenMS_1_1FeatureFinderDefs"><td class="memItemLeft" align="right" valign="top">typedef <br class="typebreak"/>
<a class="el" href="structOpenMS_1_1IsotopeCluster_1_1ChargedIndexSet.html">IsotopeCluster::ChargedIndexSet</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="structOpenMS_1_1FeatureFinderDefs.html#af01a99958d0b18999737158daf8820ac">ChargedIndexSet</a></td></tr>
<tr class="memdesc:af01a99958d0b18999737158daf8820ac inherit pub_types_structOpenMS_1_1FeatureFinderDefs"><td class="mdescLeft"> </td><td class="mdescRight">Index to peak consisting of two UInts (scan index / peak index) with charge information. <a href="#af01a99958d0b18999737158daf8820ac">More...</a><br/></td></tr>
<tr class="separator:af01a99958d0b18999737158daf8820ac inherit pub_types_structOpenMS_1_1FeatureFinderDefs"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:af7439235b89a75354a2e87350e36834f inherit pub_types_structOpenMS_1_1FeatureFinderDefs"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="structOpenMS_1_1IsotopeCluster.html#aed4049efd4228c847ab300ac4c466eca">IsotopeCluster::IndexSet</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="structOpenMS_1_1FeatureFinderDefs.html#af7439235b89a75354a2e87350e36834f">IndexSet</a></td></tr>
<tr class="memdesc:af7439235b89a75354a2e87350e36834f inherit pub_types_structOpenMS_1_1FeatureFinderDefs"><td class="mdescLeft"> </td><td class="mdescRight">A set of peak indices. <a href="#af7439235b89a75354a2e87350e36834f">More...</a><br/></td></tr>
<tr class="separator:af7439235b89a75354a2e87350e36834f inherit pub_types_structOpenMS_1_1FeatureFinderDefs"><td class="memSeparator" colspan="2"> </td></tr>
</table><table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pub-methods"></a>
Public Member Functions</h2></td></tr>
<tr class="memitem:a26be3e303b6eebf9cf1a0d2835fb4390"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1SimpleSeeder.html#a26be3e303b6eebf9cf1a0d2835fb4390">SimpleSeeder</a> (const <a class="el" href="classOpenMS_1_1MSExperiment.html">MSExperiment</a>< <a class="el" href="namespaceOpenMS.html#a013338b7bdbb5c3b4c78666656070e23">PeakType</a> > *map, <a class="el" href="classOpenMS_1_1FeatureMap.html">FeatureMap</a>< FeatureType > *features, <a class="el" href="classOpenMS_1_1FeatureFinder.html">FeatureFinder</a> *ff)</td></tr>
<tr class="memdesc:a26be3e303b6eebf9cf1a0d2835fb4390"><td class="mdescLeft"> </td><td class="mdescRight">Constructor. <a href="#a26be3e303b6eebf9cf1a0d2835fb4390">More...</a><br/></td></tr>
<tr class="separator:a26be3e303b6eebf9cf1a0d2835fb4390"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:aff93a5cc657a9ed140db72b42ec1d655"><td class="memItemLeft" align="right" valign="top">virtual </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1SimpleSeeder.html#aff93a5cc657a9ed140db72b42ec1d655">~SimpleSeeder</a> ()</td></tr>
<tr class="memdesc:aff93a5cc657a9ed140db72b42ec1d655"><td class="mdescLeft"> </td><td class="mdescRight">destructor <a href="#aff93a5cc657a9ed140db72b42ec1d655">More...</a><br/></td></tr>
<tr class="separator:aff93a5cc657a9ed140db72b42ec1d655"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a9101eb2633f34b26a1436b3d8e1e7522"><td class="memItemLeft" align="right" valign="top"><a class="el" href="structOpenMS_1_1FeatureFinderDefs.html#aaee0bfd850887fdc58115cead9e9b8b9">IndexPair</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1SimpleSeeder.html#a9101eb2633f34b26a1436b3d8e1e7522">nextSeed</a> ()</td></tr>
<tr class="memdesc:a9101eb2633f34b26a1436b3d8e1e7522"><td class="mdescLeft"> </td><td class="mdescRight">return the next seed <a href="#a9101eb2633f34b26a1436b3d8e1e7522">More...</a><br/></td></tr>
<tr class="separator:a9101eb2633f34b26a1436b3d8e1e7522"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="inherit_header pub_methods_classOpenMS_1_1FeaFiModule"><td colspan="2" onclick="javascript:toggleInherit('pub_methods_classOpenMS_1_1FeaFiModule')"><img src="closed.png" alt="-"/> Public Member Functions inherited from <a class="el" href="classOpenMS_1_1FeaFiModule.html">FeaFiModule< PeakType, FeatureType ></a></td></tr>
<tr class="memitem:ad3fe3d27b98fcd12d996b358e30723fa inherit pub_methods_classOpenMS_1_1FeaFiModule"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1FeaFiModule.html#ad3fe3d27b98fcd12d996b358e30723fa">FeaFiModule</a> (const <a class="el" href="classOpenMS_1_1MSExperiment.html">MSExperiment</a>< <a class="el" href="namespaceOpenMS.html#a013338b7bdbb5c3b4c78666656070e23">PeakType</a> > *map, <a class="el" href="classOpenMS_1_1FeatureMap.html">FeatureMap</a>< FeatureType > *features, <a class="el" href="classOpenMS_1_1FeatureFinder.html">FeatureFinder</a> *ff)</td></tr>
<tr class="memdesc:ad3fe3d27b98fcd12d996b358e30723fa inherit pub_methods_classOpenMS_1_1FeaFiModule"><td class="mdescLeft"> </td><td class="mdescRight">Constructor. <a href="#ad3fe3d27b98fcd12d996b358e30723fa">More...</a><br/></td></tr>
<tr class="separator:ad3fe3d27b98fcd12d996b358e30723fa inherit pub_methods_classOpenMS_1_1FeaFiModule"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:aa14dc0b3522c854b9005fc9dd5c754d3 inherit pub_methods_classOpenMS_1_1FeaFiModule"><td class="memItemLeft" align="right" valign="top">virtual </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1FeaFiModule.html#aa14dc0b3522c854b9005fc9dd5c754d3">~FeaFiModule</a> ()</td></tr>
<tr class="memdesc:aa14dc0b3522c854b9005fc9dd5c754d3 inherit pub_methods_classOpenMS_1_1FeaFiModule"><td class="mdescLeft"> </td><td class="mdescRight">destructor <a href="#aa14dc0b3522c854b9005fc9dd5c754d3">More...</a><br/></td></tr>
<tr class="separator:aa14dc0b3522c854b9005fc9dd5c754d3 inherit pub_methods_classOpenMS_1_1FeaFiModule"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a4698fa90bfbdd5729e0e25c62345ff0d inherit pub_methods_classOpenMS_1_1FeaFiModule"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1FeaFiModule.html#a221361082f641c3fccc58e9bc66aeee1">IntensityType</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1FeaFiModule.html#a4698fa90bfbdd5729e0e25c62345ff0d">getPeakIntensity</a> (const <a class="el" href="structOpenMS_1_1FeatureFinderDefs.html#aaee0bfd850887fdc58115cead9e9b8b9">FeatureFinderDefs::IndexPair</a> &index) const </td></tr>
<tr class="memdesc:a4698fa90bfbdd5729e0e25c62345ff0d inherit pub_methods_classOpenMS_1_1FeaFiModule"><td class="mdescLeft"> </td><td class="mdescRight">Returns the intensity of a peak. <a href="#a4698fa90bfbdd5729e0e25c62345ff0d">More...</a><br/></td></tr>
<tr class="separator:a4698fa90bfbdd5729e0e25c62345ff0d inherit pub_methods_classOpenMS_1_1FeaFiModule"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a606049d47faacd506705556d333849a2 inherit pub_methods_classOpenMS_1_1FeaFiModule"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1FeaFiModule.html#a181486a43da338e31f089df7661f50bb">CoordinateType</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1FeaFiModule.html#a606049d47faacd506705556d333849a2">getPeakMz</a> (const <a class="el" href="structOpenMS_1_1FeatureFinderDefs.html#aaee0bfd850887fdc58115cead9e9b8b9">FeatureFinderDefs::IndexPair</a> &index) const </td></tr>
<tr class="memdesc:a606049d47faacd506705556d333849a2 inherit pub_methods_classOpenMS_1_1FeaFiModule"><td class="mdescLeft"> </td><td class="mdescRight">Returns the m/z of a peak. <a href="#a606049d47faacd506705556d333849a2">More...</a><br/></td></tr>
<tr class="separator:a606049d47faacd506705556d333849a2 inherit pub_methods_classOpenMS_1_1FeaFiModule"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a8e5564d7b686645a7d7d6f5aed8cd494 inherit pub_methods_classOpenMS_1_1FeaFiModule"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1FeaFiModule.html#a181486a43da338e31f089df7661f50bb">CoordinateType</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1FeaFiModule.html#a8e5564d7b686645a7d7d6f5aed8cd494">getPeakRt</a> (const <a class="el" href="structOpenMS_1_1FeatureFinderDefs.html#aaee0bfd850887fdc58115cead9e9b8b9">FeatureFinderDefs::IndexPair</a> &index) const </td></tr>
<tr class="memdesc:a8e5564d7b686645a7d7d6f5aed8cd494 inherit pub_methods_classOpenMS_1_1FeaFiModule"><td class="mdescLeft"> </td><td class="mdescRight">Returns the retention time of a peak. <a href="#a8e5564d7b686645a7d7d6f5aed8cd494">More...</a><br/></td></tr>
<tr class="separator:a8e5564d7b686645a7d7d6f5aed8cd494 inherit pub_methods_classOpenMS_1_1FeaFiModule"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a9f755c03fd9b7a485fec02224cc858d7 inherit pub_methods_classOpenMS_1_1FeaFiModule"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1FeaFiModule.html#a9f755c03fd9b7a485fec02224cc858d7">getNextMz</a> (<a class="el" href="structOpenMS_1_1FeatureFinderDefs.html#aaee0bfd850887fdc58115cead9e9b8b9">FeatureFinderDefs::IndexPair</a> &index) const </td></tr>
<tr class="memdesc:a9f755c03fd9b7a485fec02224cc858d7 inherit pub_methods_classOpenMS_1_1FeaFiModule"><td class="mdescLeft"> </td><td class="mdescRight">fills <code>index</code> with the index of next peak in m/z dimension <a href="#a9f755c03fd9b7a485fec02224cc858d7">More...</a><br/></td></tr>
<tr class="separator:a9f755c03fd9b7a485fec02224cc858d7 inherit pub_methods_classOpenMS_1_1FeaFiModule"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a62c6d0208b4fc2bc51e55eea8ea1ce9d inherit pub_methods_classOpenMS_1_1FeaFiModule"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1FeaFiModule.html#a62c6d0208b4fc2bc51e55eea8ea1ce9d">getPrevMz</a> (<a class="el" href="structOpenMS_1_1FeatureFinderDefs.html#aaee0bfd850887fdc58115cead9e9b8b9">FeatureFinderDefs::IndexPair</a> &index) const </td></tr>
<tr class="memdesc:a62c6d0208b4fc2bc51e55eea8ea1ce9d inherit pub_methods_classOpenMS_1_1FeaFiModule"><td class="mdescLeft"> </td><td class="mdescRight">fills <code>index</code> with the index of previous peak in m/z dimension <a href="#a62c6d0208b4fc2bc51e55eea8ea1ce9d">More...</a><br/></td></tr>
<tr class="separator:a62c6d0208b4fc2bc51e55eea8ea1ce9d inherit pub_methods_classOpenMS_1_1FeaFiModule"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:adf52c00b457571ad74d59a5d6fd12d1a inherit pub_methods_classOpenMS_1_1FeaFiModule"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1FeaFiModule.html#adf52c00b457571ad74d59a5d6fd12d1a">getNextRt</a> (<a class="el" href="structOpenMS_1_1FeatureFinderDefs.html#aaee0bfd850887fdc58115cead9e9b8b9">FeatureFinderDefs::IndexPair</a> &index)</td></tr>
<tr class="memdesc:adf52c00b457571ad74d59a5d6fd12d1a inherit pub_methods_classOpenMS_1_1FeaFiModule"><td class="mdescLeft"> </td><td class="mdescRight">fills <code>index</code> with the index of the nearest peak in the next scan <a href="#adf52c00b457571ad74d59a5d6fd12d1a">More...</a><br/></td></tr>
<tr class="separator:adf52c00b457571ad74d59a5d6fd12d1a inherit pub_methods_classOpenMS_1_1FeaFiModule"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:ad4efb644d8a117edfaf7f0f5a9b34e0a inherit pub_methods_classOpenMS_1_1FeaFiModule"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1FeaFiModule.html#ad4efb644d8a117edfaf7f0f5a9b34e0a">getPrevRt</a> (<a class="el" href="structOpenMS_1_1FeatureFinderDefs.html#aaee0bfd850887fdc58115cead9e9b8b9">FeatureFinderDefs::IndexPair</a> &index)</td></tr>
<tr class="memdesc:ad4efb644d8a117edfaf7f0f5a9b34e0a inherit pub_methods_classOpenMS_1_1FeaFiModule"><td class="mdescLeft"> </td><td class="mdescRight">fills <code>index</code> with the index of the nearest peak in the previous scan <a href="#ad4efb644d8a117edfaf7f0f5a9b34e0a">More...</a><br/></td></tr>
<tr class="separator:ad4efb644d8a117edfaf7f0f5a9b34e0a inherit pub_methods_classOpenMS_1_1FeaFiModule"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:ac641d17ba54cde66c331d17bdee355e8 inherit pub_methods_classOpenMS_1_1FeaFiModule"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1FeaFiModule.html#ac641d17ba54cde66c331d17bdee355e8">addConvexHull</a> (const <a class="el" href="structOpenMS_1_1FeatureFinderDefs.html#af7439235b89a75354a2e87350e36834f">FeatureFinderDefs::IndexSet</a> &set, <a class="el" href="classOpenMS_1_1Feature.html">Feature</a> &feature) const </td></tr>
<tr class="memdesc:ac641d17ba54cde66c331d17bdee355e8 inherit pub_methods_classOpenMS_1_1FeaFiModule"><td class="mdescLeft"> </td><td class="mdescRight">Calculates the convex hull of a index <code>set</code> and adds it to the <code>feature</code>. <a href="#ac641d17ba54cde66c331d17bdee355e8">More...</a><br/></td></tr>
<tr class="separator:ac641d17ba54cde66c331d17bdee355e8 inherit pub_methods_classOpenMS_1_1FeaFiModule"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="inherit_header pub_methods_classOpenMS_1_1DefaultParamHandler"><td colspan="2" onclick="javascript:toggleInherit('pub_methods_classOpenMS_1_1DefaultParamHandler')"><img src="closed.png" alt="-"/> Public Member Functions inherited from <a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td></tr>
<tr class="memitem:afb6802fda161cb0c1a4a05597f94aecc inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#afb6802fda161cb0c1a4a05597f94aecc">DefaultParamHandler</a> (const <a class="el" href="classOpenMS_1_1String.html">String</a> &name)</td></tr>
<tr class="memdesc:afb6802fda161cb0c1a4a05597f94aecc inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="mdescLeft"> </td><td class="mdescRight">Constructor with name that is displayed in error messages. <a href="#afb6802fda161cb0c1a4a05597f94aecc">More...</a><br/></td></tr>
<tr class="separator:afb6802fda161cb0c1a4a05597f94aecc inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a954da7eef3cfddda446574eaadd20abb inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a954da7eef3cfddda446574eaadd20abb">DefaultParamHandler</a> (const <a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a> &rhs)</td></tr>
<tr class="memdesc:a954da7eef3cfddda446574eaadd20abb inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="mdescLeft"> </td><td class="mdescRight">Copy constructor. <a href="#a954da7eef3cfddda446574eaadd20abb">More...</a><br/></td></tr>
<tr class="separator:a954da7eef3cfddda446574eaadd20abb inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a11e9d6dd34fe8860874aa8abe0ec121b inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memItemLeft" align="right" valign="top">virtual </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a11e9d6dd34fe8860874aa8abe0ec121b">~DefaultParamHandler</a> ()</td></tr>
<tr class="memdesc:a11e9d6dd34fe8860874aa8abe0ec121b inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="mdescLeft"> </td><td class="mdescRight">Destructor. <a href="#a11e9d6dd34fe8860874aa8abe0ec121b">More...</a><br/></td></tr>
<tr class="separator:a11e9d6dd34fe8860874aa8abe0ec121b inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:ae6b6d68036a573a44f6609460ba2dfb6 inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memItemLeft" align="right" valign="top">virtual <a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#ae6b6d68036a573a44f6609460ba2dfb6">operator=</a> (const <a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a> &rhs)</td></tr>
<tr class="memdesc:ae6b6d68036a573a44f6609460ba2dfb6 inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="mdescLeft"> </td><td class="mdescRight">Assignment operator. <a href="#ae6b6d68036a573a44f6609460ba2dfb6">More...</a><br/></td></tr>
<tr class="separator:ae6b6d68036a573a44f6609460ba2dfb6 inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:ac435f2dd4d9f9328db83af97129a8d7e inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memItemLeft" align="right" valign="top">virtual bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#ac435f2dd4d9f9328db83af97129a8d7e">operator==</a> (const <a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a> &rhs) const </td></tr>
<tr class="memdesc:ac435f2dd4d9f9328db83af97129a8d7e inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="mdescLeft"> </td><td class="mdescRight">Equality operator. <a href="#ac435f2dd4d9f9328db83af97129a8d7e">More...</a><br/></td></tr>
<tr class="separator:ac435f2dd4d9f9328db83af97129a8d7e inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:abc8067511cfc949ae942ea2b08588f81 inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#abc8067511cfc949ae942ea2b08588f81">setParameters</a> (const <a class="el" href="classOpenMS_1_1Param.html">Param</a> &param)</td></tr>
<tr class="memdesc:abc8067511cfc949ae942ea2b08588f81 inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="mdescLeft"> </td><td class="mdescRight">Sets the parameters. <a href="#abc8067511cfc949ae942ea2b08588f81">More...</a><br/></td></tr>
<tr class="separator:abc8067511cfc949ae942ea2b08588f81 inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a7f6aab5a7dfbdd1c062a4352a29361f3 inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memItemLeft" align="right" valign="top">const <a class="el" href="classOpenMS_1_1Param.html">Param</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a7f6aab5a7dfbdd1c062a4352a29361f3">getParameters</a> () const </td></tr>
<tr class="memdesc:a7f6aab5a7dfbdd1c062a4352a29361f3 inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="mdescLeft"> </td><td class="mdescRight">Non-mutable access to the parameters. <a href="#a7f6aab5a7dfbdd1c062a4352a29361f3">More...</a><br/></td></tr>
<tr class="separator:a7f6aab5a7dfbdd1c062a4352a29361f3 inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a02f02fa9832ca3e8d47c575a39803a2a inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memItemLeft" align="right" valign="top">const <a class="el" href="classOpenMS_1_1Param.html">Param</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a02f02fa9832ca3e8d47c575a39803a2a">getDefaults</a> () const </td></tr>
<tr class="memdesc:a02f02fa9832ca3e8d47c575a39803a2a inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="mdescLeft"> </td><td class="mdescRight">Non-mutable access to the default parameters. <a href="#a02f02fa9832ca3e8d47c575a39803a2a">More...</a><br/></td></tr>
<tr class="separator:a02f02fa9832ca3e8d47c575a39803a2a inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:aaee0f2845288173de9f6ad47e6ad31d5 inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memItemLeft" align="right" valign="top">const <a class="el" href="classOpenMS_1_1String.html">String</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#aaee0f2845288173de9f6ad47e6ad31d5">getName</a> () const </td></tr>
<tr class="memdesc:aaee0f2845288173de9f6ad47e6ad31d5 inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="mdescLeft"> </td><td class="mdescRight">Non-mutable access to the name. <a href="#aaee0f2845288173de9f6ad47e6ad31d5">More...</a><br/></td></tr>
<tr class="separator:aaee0f2845288173de9f6ad47e6ad31d5 inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a77d37f2e1c12e8bd33ea0e660a89e927 inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a77d37f2e1c12e8bd33ea0e660a89e927">setName</a> (const <a class="el" href="classOpenMS_1_1String.html">String</a> &name)</td></tr>
<tr class="memdesc:a77d37f2e1c12e8bd33ea0e660a89e927 inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="mdescLeft"> </td><td class="mdescRight">Mutable access to the name. <a href="#a77d37f2e1c12e8bd33ea0e660a89e927">More...</a><br/></td></tr>
<tr class="separator:a77d37f2e1c12e8bd33ea0e660a89e927 inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a768d4a2093627a2f34728656a9721bdf inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memItemLeft" align="right" valign="top">const std::vector< <a class="el" href="classOpenMS_1_1String.html">String</a> > & </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a768d4a2093627a2f34728656a9721bdf">getSubsections</a> () const </td></tr>
<tr class="memdesc:a768d4a2093627a2f34728656a9721bdf inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="mdescLeft"> </td><td class="mdescRight">Non-mutable access to the registered subsections. <a href="#a768d4a2093627a2f34728656a9721bdf">More...</a><br/></td></tr>
<tr class="separator:a768d4a2093627a2f34728656a9721bdf inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memSeparator" colspan="2"> </td></tr>
</table><table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pro-methods"></a>
Protected Member Functions</h2></td></tr>
<tr class="memitem:a6aca068dd3cf1a6c7e78091c9bdae961"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1SimpleSeeder.html#a6aca068dd3cf1a6c7e78091c9bdae961">initialize_</a> ()</td></tr>
<tr class="separator:a6aca068dd3cf1a6c7e78091c9bdae961"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="inherit_header pro_methods_classOpenMS_1_1DefaultParamHandler"><td colspan="2" onclick="javascript:toggleInherit('pro_methods_classOpenMS_1_1DefaultParamHandler')"><img src="closed.png" alt="-"/> Protected Member Functions inherited from <a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td></tr>
<tr class="memitem:a776f7572fc4f466e9527ca233471920d inherit pro_methods_classOpenMS_1_1DefaultParamHandler"><td class="memItemLeft" align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a776f7572fc4f466e9527ca233471920d">updateMembers_</a> ()</td></tr>
<tr class="memdesc:a776f7572fc4f466e9527ca233471920d inherit pro_methods_classOpenMS_1_1DefaultParamHandler"><td class="mdescLeft"> </td><td class="mdescRight">This method is used to update extra member variables at the end of the <a class="el" href="classOpenMS_1_1DefaultParamHandler.html#abc8067511cfc949ae942ea2b08588f81" title="Sets the parameters. ">setParameters()</a> method. <a href="#a776f7572fc4f466e9527ca233471920d">More...</a><br/></td></tr>
<tr class="separator:a776f7572fc4f466e9527ca233471920d inherit pro_methods_classOpenMS_1_1DefaultParamHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a2802c591e6d7fd3fd9cc35f5e875d0ba inherit pro_methods_classOpenMS_1_1DefaultParamHandler"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a2802c591e6d7fd3fd9cc35f5e875d0ba">defaultsToParam_</a> ()</td></tr>
<tr class="memdesc:a2802c591e6d7fd3fd9cc35f5e875d0ba inherit pro_methods_classOpenMS_1_1DefaultParamHandler"><td class="mdescLeft"> </td><td class="mdescRight">Updates the parameters after the defaults have been set in the constructor. <a href="#a2802c591e6d7fd3fd9cc35f5e875d0ba">More...</a><br/></td></tr>
<tr class="separator:a2802c591e6d7fd3fd9cc35f5e875d0ba inherit pro_methods_classOpenMS_1_1DefaultParamHandler"><td class="memSeparator" colspan="2"> </td></tr>
</table><table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pro-attribs"></a>
Protected Attributes</h2></td></tr>
<tr class="memitem:a706b87b86a3e85488364af294e5a31fa"><td class="memItemLeft" align="right" valign="top">std::vector< <a class="el" href="structOpenMS_1_1FeatureFinderDefs.html#aaee0bfd850887fdc58115cead9e9b8b9">IndexPair</a> > </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1SimpleSeeder.html#a706b87b86a3e85488364af294e5a31fa">indices_</a></td></tr>
<tr class="memdesc:a706b87b86a3e85488364af294e5a31fa"><td class="mdescLeft"> </td><td class="mdescRight">contains the indizes <a href="#a706b87b86a3e85488364af294e5a31fa">More...</a><br/></td></tr>
<tr class="separator:a706b87b86a3e85488364af294e5a31fa"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:aa14c9407cdca7351284985b4ceddc466"><td class="memItemLeft" align="right" valign="top">std::vector< <a class="el" href="structOpenMS_1_1FeatureFinderDefs.html#aaee0bfd850887fdc58115cead9e9b8b9">IndexPair</a> ><br class="typebreak"/>
::const_iterator </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1SimpleSeeder.html#aa14c9407cdca7351284985b4ceddc466">current_peak_</a></td></tr>
<tr class="memdesc:aa14c9407cdca7351284985b4ceddc466"><td class="mdescLeft"> </td><td class="mdescRight">Points to the next peak in the peak vector. <a href="#aa14c9407cdca7351284985b4ceddc466">More...</a><br/></td></tr>
<tr class="separator:aa14c9407cdca7351284985b4ceddc466"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:aef7436a220692b5b863db4e9d8b870a3"><td class="memItemLeft" align="right" valign="top">bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1SimpleSeeder.html#aef7436a220692b5b863db4e9d8b870a3">initialized_</a></td></tr>
<tr class="memdesc:aef7436a220692b5b863db4e9d8b870a3"><td class="mdescLeft"> </td><td class="mdescRight">Flag that indicates of the indices are initialized. <a href="#aef7436a220692b5b863db4e9d8b870a3">More...</a><br/></td></tr>
<tr class="separator:aef7436a220692b5b863db4e9d8b870a3"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="inherit_header pro_attribs_classOpenMS_1_1FeaFiModule"><td colspan="2" onclick="javascript:toggleInherit('pro_attribs_classOpenMS_1_1FeaFiModule')"><img src="closed.png" alt="-"/> Protected Attributes inherited from <a class="el" href="classOpenMS_1_1FeaFiModule.html">FeaFiModule< PeakType, FeatureType ></a></td></tr>
<tr class="memitem:a365c5cf67d48519199fe00cb5688d628 inherit pro_attribs_classOpenMS_1_1FeaFiModule"><td class="memItemLeft" align="right" valign="top">const <a class="el" href="classOpenMS_1_1FeaFiModule.html#adf6f376e844058d129ce8ba868276643">MapType</a> * </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1FeaFiModule.html#a365c5cf67d48519199fe00cb5688d628">map_</a></td></tr>
<tr class="memdesc:a365c5cf67d48519199fe00cb5688d628 inherit pro_attribs_classOpenMS_1_1FeaFiModule"><td class="mdescLeft"> </td><td class="mdescRight">Input data pointer. <a href="#a365c5cf67d48519199fe00cb5688d628">More...</a><br/></td></tr>
<tr class="separator:a365c5cf67d48519199fe00cb5688d628 inherit pro_attribs_classOpenMS_1_1FeaFiModule"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a5f09052343ef99616ad653897841ce3e inherit pro_attribs_classOpenMS_1_1FeaFiModule"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1FeaFiModule.html#a21ea3968c35235b6b3cd78a2190280d9">FeatureMapType</a> * </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1FeaFiModule.html#a5f09052343ef99616ad653897841ce3e">features_</a></td></tr>
<tr class="memdesc:a5f09052343ef99616ad653897841ce3e inherit pro_attribs_classOpenMS_1_1FeaFiModule"><td class="mdescLeft"> </td><td class="mdescRight">Output data pointer. <a href="#a5f09052343ef99616ad653897841ce3e">More...</a><br/></td></tr>
<tr class="separator:a5f09052343ef99616ad653897841ce3e inherit pro_attribs_classOpenMS_1_1FeaFiModule"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:adf68cb378c76b322b2cc4dbb2c145a3e inherit pro_attribs_classOpenMS_1_1FeaFiModule"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1FeatureFinder.html">FeatureFinder</a> * </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1FeaFiModule.html#adf68cb378c76b322b2cc4dbb2c145a3e">ff_</a></td></tr>
<tr class="memdesc:adf68cb378c76b322b2cc4dbb2c145a3e inherit pro_attribs_classOpenMS_1_1FeaFiModule"><td class="mdescLeft"> </td><td class="mdescRight">Pointer to the calling <a class="el" href="classOpenMS_1_1FeatureFinder.html" title="The main feature finder class. ">FeatureFinder</a> that is used to access the feature flags and report progress. <a href="#adf68cb378c76b322b2cc4dbb2c145a3e">More...</a><br/></td></tr>
<tr class="separator:adf68cb378c76b322b2cc4dbb2c145a3e inherit pro_attribs_classOpenMS_1_1FeaFiModule"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="inherit_header pro_attribs_classOpenMS_1_1DefaultParamHandler"><td colspan="2" onclick="javascript:toggleInherit('pro_attribs_classOpenMS_1_1DefaultParamHandler')"><img src="closed.png" alt="-"/> Protected Attributes inherited from <a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td></tr>
<tr class="memitem:a28c73e623c63a4fe3bfceb1ae8274f39 inherit pro_attribs_classOpenMS_1_1DefaultParamHandler"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1Param.html">Param</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a28c73e623c63a4fe3bfceb1ae8274f39">param_</a></td></tr>
<tr class="memdesc:a28c73e623c63a4fe3bfceb1ae8274f39 inherit pro_attribs_classOpenMS_1_1DefaultParamHandler"><td class="mdescLeft"> </td><td class="mdescRight">Container for current parameters. <a href="#a28c73e623c63a4fe3bfceb1ae8274f39">More...</a><br/></td></tr>
<tr class="separator:a28c73e623c63a4fe3bfceb1ae8274f39 inherit pro_attribs_classOpenMS_1_1DefaultParamHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a761b1937850c141d0c6fff0e4d633a04 inherit pro_attribs_classOpenMS_1_1DefaultParamHandler"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1Param.html">Param</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a761b1937850c141d0c6fff0e4d633a04">defaults_</a></td></tr>
<tr class="memdesc:a761b1937850c141d0c6fff0e4d633a04 inherit pro_attribs_classOpenMS_1_1DefaultParamHandler"><td class="mdescLeft"> </td><td class="mdescRight">Container for default parameters. This member should be filled in the constructor of derived classes! <a href="#a761b1937850c141d0c6fff0e4d633a04">More...</a><br/></td></tr>
<tr class="separator:a761b1937850c141d0c6fff0e4d633a04 inherit pro_attribs_classOpenMS_1_1DefaultParamHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:ac4b0e20bc59c7a5afe016c69067e428c inherit pro_attribs_classOpenMS_1_1DefaultParamHandler"><td class="memItemLeft" align="right" valign="top">std::vector< <a class="el" href="classOpenMS_1_1String.html">String</a> > </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#ac4b0e20bc59c7a5afe016c69067e428c">subsections_</a></td></tr>
<tr class="memdesc:ac4b0e20bc59c7a5afe016c69067e428c inherit pro_attribs_classOpenMS_1_1DefaultParamHandler"><td class="mdescLeft"> </td><td class="mdescRight">Container for registered subsections. This member should be filled in the constructor of derived classes! <a href="#ac4b0e20bc59c7a5afe016c69067e428c">More...</a><br/></td></tr>
<tr class="separator:ac4b0e20bc59c7a5afe016c69067e428c inherit pro_attribs_classOpenMS_1_1DefaultParamHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a5a51f3f150b09068256195e934339a19 inherit pro_attribs_classOpenMS_1_1DefaultParamHandler"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1String.html">String</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a5a51f3f150b09068256195e934339a19">error_name_</a></td></tr>
<tr class="memdesc:a5a51f3f150b09068256195e934339a19 inherit pro_attribs_classOpenMS_1_1DefaultParamHandler"><td class="mdescLeft"> </td><td class="mdescRight">Name that is displayed in error messages during the parameter checking. <a href="#a5a51f3f150b09068256195e934339a19">More...</a><br/></td></tr>
<tr class="separator:a5a51f3f150b09068256195e934339a19 inherit pro_attribs_classOpenMS_1_1DefaultParamHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a7c3b265b697a57615da5cd3274780efd inherit pro_attribs_classOpenMS_1_1DefaultParamHandler"><td class="memItemLeft" align="right" valign="top">bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a7c3b265b697a57615da5cd3274780efd">check_defaults_</a></td></tr>
<tr class="memdesc:a7c3b265b697a57615da5cd3274780efd inherit pro_attribs_classOpenMS_1_1DefaultParamHandler"><td class="mdescLeft"> </td><td class="mdescRight">If this member is set to false no checking if parameters in done;. <a href="#a7c3b265b697a57615da5cd3274780efd">More...</a><br/></td></tr>
<tr class="separator:a7c3b265b697a57615da5cd3274780efd inherit pro_attribs_classOpenMS_1_1DefaultParamHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:aba444910e4fccb93f91bf7ab135f508a inherit pro_attribs_classOpenMS_1_1DefaultParamHandler"><td class="memItemLeft" align="right" valign="top">bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#aba444910e4fccb93f91bf7ab135f508a">warn_empty_defaults_</a></td></tr>
<tr class="memdesc:aba444910e4fccb93f91bf7ab135f508a inherit pro_attribs_classOpenMS_1_1DefaultParamHandler"><td class="mdescLeft"> </td><td class="mdescRight">If this member is set to false no warning is emitted when defaults are empty;. <a href="#aba444910e4fccb93f91bf7ab135f508a">More...</a><br/></td></tr>
<tr class="separator:aba444910e4fccb93f91bf7ab135f508a inherit pro_attribs_classOpenMS_1_1DefaultParamHandler"><td class="memSeparator" colspan="2"> </td></tr>
</table><table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pri-methods"></a>
Private Member Functions</h2></td></tr>
<tr class="memitem:a10182f992ebcabc30c6381a0ca717b0f"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1SimpleSeeder.html#a10182f992ebcabc30c6381a0ca717b0f">SimpleSeeder</a> ()</td></tr>
<tr class="memdesc:a10182f992ebcabc30c6381a0ca717b0f"><td class="mdescLeft"> </td><td class="mdescRight">Not implemented. <a href="#a10182f992ebcabc30c6381a0ca717b0f">More...</a><br/></td></tr>
<tr class="separator:a10182f992ebcabc30c6381a0ca717b0f"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a423e81ab59850dc5bfc289f6194c166d"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1SimpleSeeder.html">SimpleSeeder</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1SimpleSeeder.html#a423e81ab59850dc5bfc289f6194c166d">operator=</a> (const <a class="el" href="classOpenMS_1_1SimpleSeeder.html">SimpleSeeder</a> &)</td></tr>
<tr class="memdesc:a423e81ab59850dc5bfc289f6194c166d"><td class="mdescLeft"> </td><td class="mdescRight">Not implemented. <a href="#a423e81ab59850dc5bfc289f6194c166d">More...</a><br/></td></tr>
<tr class="separator:a423e81ab59850dc5bfc289f6194c166d"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:abee996973b903f51f7a117b8e71cc416"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1SimpleSeeder.html#abee996973b903f51f7a117b8e71cc416">SimpleSeeder</a> (const <a class="el" href="classOpenMS_1_1SimpleSeeder.html">SimpleSeeder</a> &)</td></tr>
<tr class="memdesc:abee996973b903f51f7a117b8e71cc416"><td class="mdescLeft"> </td><td class="mdescRight">Not implemented. <a href="#abee996973b903f51f7a117b8e71cc416">More...</a><br/></td></tr>
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</table>
<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
<div class="textblock"><h3>template<class PeakType, class FeatureType><br/>
class OpenMS::SimpleSeeder< PeakType, FeatureType ></h3>
<p>Simple seeding class that uses the strongest peak as next seed. </p>
<p>This class simply sorts the peaks according to intensity and proposes the highest peak, which is not yet included in a feature, as next seed.</p>
<B>Parameters of this class are:</B><BR><BR>
<table border="1" style="border-style:solid; border-collapse:collapse; border-color:#c0c0c0;" width="100%" cellpadding="4">
<tr style="border-bottom:1px solid black; background:#fffff0"><th>Name</th><th>Type</th><th>Default</th><th>Restrictions</th><th>Description</th></tr>
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<td style="vertical-align:top"><b>min_intensity</b></td>
<td style="vertical-align:top">float</td><td style="vertical-align:top">0</td>
<td style="vertical-align:top">min: 0</td><td style="vertical-align:top">Absolute value for the minimum intensity required for a seed.</td>
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<td style="vertical-align:top"><b>signal_to_noise</b></td>
<td style="vertical-align:top">float</td><td style="vertical-align:top">10</td>
<td style="vertical-align:top">min: 0</td><td style="vertical-align:top">Minimal required SignalToNoise (S/N) ratio for a seed.</td>
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<td style="vertical-align:top"><i>SignalToNoiseEstimationParameter:max_intensity</i></td>
<td style="vertical-align:top">int</td><td style="vertical-align:top">-1</td>
<td style="vertical-align:top">min: -1</td><td style="vertical-align:top">maximal intensity considered for histogram construction. By default, it will be calculated automatically (see auto_mode). Only provide this parameter if you know what you are doing (and change 'auto_mode' to '-1')! All intensities EQUAL/ABOVE 'max_intensity' will be added to the LAST histogram bin. If you choose 'max_intensity' too small, the noise estimate might be too small as well. If chosen too big, the bins become quite large (which you could counter by increasing 'bin_count', which increases runtime). In general, the Median-S/N estimator is more robust to a manual max_intensity than the MeanIterative-S/N.</td>
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<td style="vertical-align:top"><i>SignalToNoiseEstimationParameter:auto_max_stdev_factor</i></td>
<td style="vertical-align:top">float</td><td style="vertical-align:top">3</td>
<td style="vertical-align:top">min: 0 max: 999</td><td style="vertical-align:top">parameter for 'max_intensity' estimation (if 'auto_mode' == 0): mean + 'auto_max_stdev_factor' * stdev</td>
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<td style="vertical-align:top"><i>SignalToNoiseEstimationParameter:auto_max_percentile</i></td>
<td style="vertical-align:top">int</td><td style="vertical-align:top">95</td>
<td style="vertical-align:top">min: 0 max: 100</td><td style="vertical-align:top">parameter for 'max_intensity' estimation (if 'auto_mode' == 1): auto_max_percentile th percentile</td>
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<td style="vertical-align:top"><i>SignalToNoiseEstimationParameter:auto_mode</i></td>
<td style="vertical-align:top">int</td><td style="vertical-align:top">0</td>
<td style="vertical-align:top">min: -1 max: 1</td><td style="vertical-align:top">method to use to determine maximal intensity: -1 --> use 'max_intensity'; 0 --> 'auto_max_stdev_factor' method (default); 1 --> 'auto_max_percentile' method</td>
</tr>
<tr>
<td style="vertical-align:top"><b>SignalToNoiseEstimationParameter:win_len</b></td>
<td style="vertical-align:top">float</td><td style="vertical-align:top">200</td>
<td style="vertical-align:top">min: 1</td><td style="vertical-align:top">window length in Thomson</td>
</tr>
<tr>
<td style="vertical-align:top"><b>SignalToNoiseEstimationParameter:bin_count</b></td>
<td style="vertical-align:top">int</td><td style="vertical-align:top">30</td>
<td style="vertical-align:top">min: 3</td><td style="vertical-align:top">number of bins for intensity values</td>
</tr>
<tr>
<td style="vertical-align:top"><b>SignalToNoiseEstimationParameter:min_required_elements</b></td>
<td style="vertical-align:top">int</td><td style="vertical-align:top">10</td>
<td style="vertical-align:top">min: 1</td><td style="vertical-align:top">minimum number of elements required in a window (otherwise it is considered sparse)</td>
</tr>
<tr>
<td style="vertical-align:top"><i>SignalToNoiseEstimationParameter:noise_for_empty_window</i></td>
<td style="vertical-align:top">float</td><td style="vertical-align:top">1e+20</td>
<td style="vertical-align:top"> </td><td style="vertical-align:top">noise value used for sparse windows</td>
</tr>
</table>
<br>
<b>Note:</b>
<UL style="margin-top:0px;">
<LI> If a section name is documented, the documentation is displayed as tooltip.
<LI> Advanced parameter names are italic.
</UL>
</div><h2 class="groupheader">Member Typedef Documentation</h2>
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<td class="memname">typedef <a class="el" href="classOpenMS_1_1FeaFiModule.html">FeaFiModule</a><<a class="el" href="namespaceOpenMS.html#a013338b7bdbb5c3b4c78666656070e23">PeakType</a>, FeatureType> <a class="el" href="classOpenMS_1_1SimpleSeeder.html#a79ea228cdc8755284e64dd9f625170a3">Base</a></td>
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</div><div class="memdoc">
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<td class="memname">typedef <a class="el" href="classOpenMS_1_1MSExperiment.html">MSExperiment</a><<a class="el" href="namespaceOpenMS.html#a013338b7bdbb5c3b4c78666656070e23">PeakType</a>> <a class="el" href="classOpenMS_1_1FeaFiModule.html#adf6f376e844058d129ce8ba868276643">MapType</a></td>
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</div><div class="memdoc">
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</div>
<h2 class="groupheader">Constructor & Destructor Documentation</h2>
<a class="anchor" id="a26be3e303b6eebf9cf1a0d2835fb4390"></a>
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<td class="memname"><a class="el" href="classOpenMS_1_1SimpleSeeder.html">SimpleSeeder</a> </td>
<td>(</td>
<td class="paramtype">const <a class="el" href="classOpenMS_1_1MSExperiment.html">MSExperiment</a>< <a class="el" href="namespaceOpenMS.html#a013338b7bdbb5c3b4c78666656070e23">PeakType</a> > * </td>
<td class="paramname"><em>map</em>, </td>
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<td class="paramkey"></td>
<td></td>
<td class="paramtype"><a class="el" href="classOpenMS_1_1FeatureMap.html">FeatureMap</a>< FeatureType > * </td>
<td class="paramname"><em>features</em>, </td>
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<td class="paramtype"><a class="el" href="classOpenMS_1_1FeatureFinder.html">FeatureFinder</a> * </td>
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<p>Constructor. </p>
<p>References <a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a761b1937850c141d0c6fff0e4d633a04">DefaultParamHandler::defaults_</a>, <a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a2802c591e6d7fd3fd9cc35f5e875d0ba">DefaultParamHandler::defaultsToParam_()</a>, <a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a02f02fa9832ca3e8d47c575a39803a2a">DefaultParamHandler::getDefaults()</a>, <a class="el" href="classOpenMS_1_1Param.html#ad2dc775a73f96e91dd97c61c39e4e7b8">Param::insert()</a>, <a class="el" href="classOpenMS_1_1Param.html#aadc7a8536eb15f8c6fa05eefca0e25be">Param::setMinFloat()</a>, <a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a77d37f2e1c12e8bd33ea0e660a89e927">DefaultParamHandler::setName()</a>, and <a class="el" href="classOpenMS_1_1Param.html#a432099944e11263aa20aaf8ea1389790">Param::setValue()</a>.</p>
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<p>destructor </p>
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<td class="memname"><a class="el" href="classOpenMS_1_1SimpleSeeder.html">SimpleSeeder</a> </td>
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<p>Not implemented. </p>
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<td class="paramtype">const <a class="el" href="classOpenMS_1_1SimpleSeeder.html">SimpleSeeder</a>< <a class="el" href="namespaceOpenMS.html#a013338b7bdbb5c3b4c78666656070e23">PeakType</a>, FeatureType > & </td>
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<p>Not implemented. </p>
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<h2 class="groupheader">Member Function Documentation</h2>
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<p>References <a class="el" href="classOpenMS_1_1Param.html#a25319a96118d2373efc5af9c8679b98b">Param::copy()</a>, <a class="el" href="classOpenMS_1_1SimpleSeeder.html#aa14c9407cdca7351284985b4ceddc466">SimpleSeeder< PeakType, FeatureType >::current_peak_</a>, <a class="el" href="classOpenMS_1_1FeaFiModule.html#adf68cb378c76b322b2cc4dbb2c145a3e">FeaFiModule< PeakType, FeatureType >::ff_</a>, <a class="el" href="classOpenMS_1_1FeaFiModule.html#a4698fa90bfbdd5729e0e25c62345ff0d">FeaFiModule< PeakType, FeatureType >::getPeakIntensity()</a>, <a class="el" href="classOpenMS_1_1SignalToNoiseEstimator.html#a504423b06b9d69e88d2ff68c9050889a">SignalToNoiseEstimator< Container >::getSignalToNoise()</a>, <a class="el" href="classOpenMS_1_1Param.html#abd0f5571675ec99e1aa647b39e2a8711">Param::getValue()</a>, <a class="el" href="classOpenMS_1_1SimpleSeeder.html#a706b87b86a3e85488364af294e5a31fa">SimpleSeeder< PeakType, FeatureType >::indices_</a>, <a class="el" href="classOpenMS_1_1SignalToNoiseEstimator.html#a2fba92bbe2385c5e632a4a802b7e49ae">SignalToNoiseEstimator< Container >::init()</a>, <a class="el" href="classOpenMS_1_1SimpleSeeder.html#aef7436a220692b5b863db4e9d8b870a3">SimpleSeeder< PeakType, FeatureType >::initialized_</a>, <a class="el" href="classOpenMS_1_1FeaFiModule.html#a365c5cf67d48519199fe00cb5688d628">FeaFiModule< PeakType, FeatureType >::map_</a>, <a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a28c73e623c63a4fe3bfceb1ae8274f39">DefaultParamHandler::param_</a>, <a class="el" href="namespaceOpenMS.html#a74e80d32be63268d8a46039297e18cc6">OpenMS::reverseComparator()</a>, <a class="el" href="classOpenMS_1_1DefaultParamHandler.html#abc8067511cfc949ae942ea2b08588f81">DefaultParamHandler::setParameters()</a>, and <a class="el" href="classOpenMS_1_1ProgressLogger.html#af1c45ecd71b5041b70319249e8e73591">ProgressLogger::startProgress()</a>.</p>
<p>Referenced by <a class="el" href="classOpenMS_1_1SimpleSeeder.html#a9101eb2633f34b26a1436b3d8e1e7522">SimpleSeeder< PeakType, FeatureType >::nextSeed()</a>.</p>
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<td class="memname"><a class="el" href="structOpenMS_1_1FeatureFinderDefs.html#aaee0bfd850887fdc58115cead9e9b8b9">IndexPair</a> nextSeed </td>
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<p>return the next seed </p>
<p>References <a class="el" href="classOpenMS_1_1SimpleSeeder.html#aa14c9407cdca7351284985b4ceddc466">SimpleSeeder< PeakType, FeatureType >::current_peak_</a>, <a class="el" href="classOpenMS_1_1FeaFiModule.html#adf68cb378c76b322b2cc4dbb2c145a3e">FeaFiModule< PeakType, FeatureType >::ff_</a>, <a class="el" href="classOpenMS_1_1FeatureFinder.html#a91adbb58dfeb79d2b5d78c1047f406c9">FeatureFinder::getPeakFlag()</a>, <a class="el" href="classOpenMS_1_1SimpleSeeder.html#a706b87b86a3e85488364af294e5a31fa">SimpleSeeder< PeakType, FeatureType >::indices_</a>, <a class="el" href="classOpenMS_1_1SimpleSeeder.html#a6aca068dd3cf1a6c7e78091c9bdae961">SimpleSeeder< PeakType, FeatureType >::initialize_()</a>, <a class="el" href="classOpenMS_1_1SimpleSeeder.html#aef7436a220692b5b863db4e9d8b870a3">SimpleSeeder< PeakType, FeatureType >::initialized_</a>, <a class="el" href="classOpenMS_1_1ProgressLogger.html#a8852277abd03220cc7b80d6c1bed6fed">ProgressLogger::setProgress()</a>, and <a class="el" href="structOpenMS_1_1FeatureFinderDefs.html#a3f3de3e0d751949b8d0b60ffb302944aa1e780c62cb3fd2edcac39f739bbe6f6c">FeatureFinderDefs::USED</a>.</p>
<p>Referenced by <a class="el" href="classOpenMS_1_1FeatureFinderAlgorithmSimplest.html#a72fcb26a14f6beb1c3fbace9ab3e7dbb">FeatureFinderAlgorithmSimplest< PeakType, FeatureType >::run()</a>, and <a class="el" href="classOpenMS_1_1FeatureFinderAlgorithmSimple.html#a72fcb26a14f6beb1c3fbace9ab3e7dbb">FeatureFinderAlgorithmSimple< PeakType, FeatureType >::run()</a>.</p>
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<td class="memname"><a class="el" href="classOpenMS_1_1SimpleSeeder.html">SimpleSeeder</a>& operator= </td>
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<p>Not implemented. </p>
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<h2 class="groupheader">Member Data Documentation</h2>
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<td class="memname">std::vector<<a class="el" href="structOpenMS_1_1FeatureFinderDefs.html#aaee0bfd850887fdc58115cead9e9b8b9">IndexPair</a>>::const_iterator current_peak_</td>
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<p>Points to the next peak in the peak vector. </p>
<p>Referenced by <a class="el" href="classOpenMS_1_1SimpleSeeder.html#a6aca068dd3cf1a6c7e78091c9bdae961">SimpleSeeder< PeakType, FeatureType >::initialize_()</a>, and <a class="el" href="classOpenMS_1_1SimpleSeeder.html#a9101eb2633f34b26a1436b3d8e1e7522">SimpleSeeder< PeakType, FeatureType >::nextSeed()</a>.</p>
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<td class="memname">std::vector<<a class="el" href="structOpenMS_1_1FeatureFinderDefs.html#aaee0bfd850887fdc58115cead9e9b8b9">IndexPair</a>> indices_</td>
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<p>contains the indizes </p>
<p>Referenced by <a class="el" href="classOpenMS_1_1SimpleSeeder.html#a6aca068dd3cf1a6c7e78091c9bdae961">SimpleSeeder< PeakType, FeatureType >::initialize_()</a>, and <a class="el" href="classOpenMS_1_1SimpleSeeder.html#a9101eb2633f34b26a1436b3d8e1e7522">SimpleSeeder< PeakType, FeatureType >::nextSeed()</a>.</p>
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<p>Flag that indicates of the indices are initialized. </p>
<p>Referenced by <a class="el" href="classOpenMS_1_1SimpleSeeder.html#a6aca068dd3cf1a6c7e78091c9bdae961">SimpleSeeder< PeakType, FeatureType >::initialize_()</a>, and <a class="el" href="classOpenMS_1_1SimpleSeeder.html#a9101eb2633f34b26a1436b3d8e1e7522">SimpleSeeder< PeakType, FeatureType >::nextSeed()</a>.</p>
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<TD><font color="#c0c0c0">OpenMS / TOPP release 1.11.1</font></TD>
<TD align="right"><font color="#c0c0c0">Documentation generated on Thu Nov 14 2013 11:19:34 using doxygen 1.8.5</font></TD>
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