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<li class="navelem"><a class="el" href="namespaceOpenMS.html">OpenMS</a></li><li class="navelem"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></li>  </ul>
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<div class="title">TargetedExperiment Member List</div>  </div>
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<p>This is the complete list of members for <a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a>, including all inherited members.</p>
<table class="directory">
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#aaaef1de4f65364463ffe55b9a9963f68">addCompound</a>(const Compound &amp;rhs)</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#af99c90b032d9d618eab2c46aa54072ec">addContact</a>(const Contact &amp;contact)</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a79eac977e7e584579cd3a4d69252cb43">addCV</a>(const CV &amp;cv)</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#aa60eb5de70aefb172abd7d40281d770b">addExcludeTarget</a>(const IncludeExcludeTarget &amp;target)</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#ac84a0f845b7c468071391c3ab3db8559">addIncludeTarget</a>(const IncludeExcludeTarget &amp;target)</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a3c3a76a890bf2f5e7777c5aa0b04e8dc">addInstrument</a>(const Instrument &amp;instrument)</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a54e1bfbdfa89b4abc2f22056a9bb13a6">addPeptide</a>(const Peptide &amp;rhs)</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#aaadae361037e8e6b6d1ea797b365eb09">addProtein</a>(const Protein &amp;protein)</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#ae198d891229501c0e879a14dc9af8303">addPublication</a>(const Publication &amp;publication)</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a7ab18d77d0829f9f0aa6355db5fc7e71">addSoftware</a>(const Software &amp;software)</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a752fd4b3b846a7a768fa6f2d375947c0">addSourceFile</a>(const SourceFile &amp;source_file)</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a9af1c5c0e482acec56e60821effe6149">addTargetCVTerm</a>(const CVTerm &amp;cv_term)</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#aa269d279d1aaa3888e28cf6db84dcd49">addTransition</a>(const ReactionMonitoringTransition &amp;transition)</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#af072fc84225ae927f7527f208ea86cbd">clear</a>(bool clear_meta_data)</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#ad9f8a34047dcd2b9a9f4343b80440d3d">Compound</a> typedef</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a7daeb46f15f205b6f970d3117f3e3e69">compounds_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a8c923cc589e1bc7328743a8cedbe6f75">Contact</a> typedef</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a1de02993eba2d1ce1f8ec9e06ea28e9e">contacts_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a307733cd001c8d3615d108634b6b606c">createPeptideReferenceMap_</a>()</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a89651ae2cf65b2cec244555fd7a2f7b3">createProteinReferenceMap_</a>()</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#abd581285516dfa4bdd8753a5568931d3">CV</a> typedef</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a52f2af20740218faa4933b7d1617cf96">cvs_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#aa5f7f2226e6d7f8f046536d7ccb5225e">exclude_targets_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a473e9cd07d981f20c110efb2625264f9">getCompounds</a>() const </td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a6ad9a3cc8f3e50b4fab4090932e56d15">getContacts</a>() const </td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a51a308c8913564a638520c6454ef8dc0">getCVs</a>() const </td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#aad7718f205fd6c5935daa204224bda04">getExcludeTargets</a>() const </td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a8f9aa0ff0f3399842b76ecfaec9a7399">getIncludeTargets</a>() const </td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a6aac6323e4c4cc2fd0726c028dffade3">getInstruments</a>() const </td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a09be3742981cfcf0472c73e3fa9751b1">getPeptideByRef</a>(const String &amp;ref)</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a81362aa067155119d3122af3555227f9">getPeptides</a>() const </td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#af4001ec3baefe85d4f773f963e97c895">getProteinByRef</a>(const String &amp;ref)</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a9924478cd60380882556e780839cd2a1">getProteins</a>() const </td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#aa8d100d0ebf32e9440502e92ddcc6004">getPublications</a>() const </td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a05c465a677e755caa683ba1086f48c2b">getSoftware</a>() const </td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a9b357a65e5ec19027b8fa94379439f8c">getSourceFiles</a>() const </td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a9755ad7cb47fe7fb1371ef4826aadef3">getTargetCVTerms</a>() const </td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#af3100e829c8edc47e845f2c73c0de0c2">getTransitions</a>() const </td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a9b995e0c16c83555953a18d4aff2161e">include_targets_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a43ec2e32ea7ea4fbdb4d7938a53c635f">Instrument</a> typedef</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a94d31162aa7b7a0d5e405c204572a697">instruments_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a4798f152e8becff50de460c8d365a96b">operator+</a>(const TargetedExperiment &amp;rhs) const </td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a2a17792eaad51c5173469b2706f907c6">operator+=</a>(const TargetedExperiment &amp;rhs)</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#ae82a11018f4b2d6153cc76cd644cd058">operator=</a>(const TargetedExperiment &amp;rhs)</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a456dda83fdb0e00eec64aad436a3401e">operator==</a>(const TargetedExperiment &amp;rhs) const </td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#aa81ff3b563bdf4fff6c1e4e265f2275e">Peptide</a> typedef</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#adcbe3c4030a97e978bd547928bf71d9e">peptide_reference_map_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#afc3f7fca733362e91a2bb91afc26e9e0">peptide_reference_map_dirty_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#ad5007e557f54c148146023a446c1cfeb">PeptideReferenceMapType</a> typedef</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a748a750efa2c7114ea34f16e0742c5a7">peptides_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a68ebd15670364c76c9fa8ebcfd725217">Prediction</a> typedef</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a6be5011e53737493e15d175f5d4a1d03">Protein</a> typedef</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a9d74d4a5d7c9a776c5afbb9628fbc3d5">protein_reference_map_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#acd439a955b648ba43bdc8c5daf5bce99">protein_reference_map_dirty_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a0400a7eb8a8d5641172d4f09caa8a18c">ProteinReferenceMapType</a> typedef</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#ab2d08be0f1ac103d135c8031c340a946">proteins_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a967776ccb7c71e2110e81a1c50ee8ebd">Publication</a> typedef</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#abb5b9e36128aa8a944c25385400d8878">publications_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#aecbf6dcfb8bc066ff62e1ef0a7d655bf">RetentionTime</a> typedef</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a9c9daac17e5ba29289e7a63873a48d83">setCompounds</a>(const std::vector&lt; Compound &gt; &amp;rhs)</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a060b9003b1614394d69ba2241641f837">setContacts</a>(const std::vector&lt; Contact &gt; &amp;contacts)</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a0ad8b10f573b8e96b163199e3636a9f9">setCVs</a>(const std::vector&lt; CV &gt; &amp;cvs)</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a31e125a0a351b7a9e6a31a27691800f4">setExcludeTargets</a>(const std::vector&lt; IncludeExcludeTarget &gt; &amp;targets)</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a79c40f123e3c43068cf536ed2131b06f">setIncludeTargets</a>(const std::vector&lt; IncludeExcludeTarget &gt; &amp;targets)</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#add9f75cc55e97434d4ecae8621b8f9cf">setInstruments</a>(const std::vector&lt; Instrument &gt; &amp;instruments)</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a2b315d3dbafa87885ac5b1d1712f7da8">setPeptides</a>(const std::vector&lt; Peptide &gt; &amp;rhs)</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#adcb976b42f7b4e257a4f0a1cfda5e6f7">setProteins</a>(const std::vector&lt; Protein &gt; &amp;proteins)</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a5c9e6ead01c84a01786096813ee20a81">setPublications</a>(const std::vector&lt; Publication &gt; &amp;publications)</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#ac8e50997acbafdc702c78dc8e6b5991c">setSoftware</a>(const std::vector&lt; Software &gt; &amp;software)</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#adc78c538c853e1c54b13a9ea6fce859b">setSourceFiles</a>(const std::vector&lt; SourceFile &gt; &amp;source_files)</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a6153173d7fa80eff65e7940c97c9e0e7">setTargetCVTerms</a>(const CVTermList &amp;cv_terms)</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a738f8ae2135300f8f86bf1035d3d3842">setTargetMetaValue</a>(const String &amp;name, const DataValue &amp;value)</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a5dc11ac8bfaedaa86114efc3f2180e3b">setTransitions</a>(const std::vector&lt; ReactionMonitoringTransition &gt; &amp;transitions)</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#ad67105887a305fbd0345cadb468a957b">software_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#abc7d814820a48da344e780a775dfc5ac">sortTransitionsByProductMZ</a>()</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a72a82b25931a7ecc3444b375069ca892">source_files_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a4233d5e51ab94f269e230525d28b2d44">TargetedExperiment</a>()</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a25bd1d72d89fdc726e37fa56a8d0cb5f">TargetedExperiment</a>(const TargetedExperiment &amp;rhs)</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#a221e5a78a25ae13b2cfe9b4f2caeadb8">targets_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#abb0eb582391f4fb009828c771881496b">transitions_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html#ae87cb415b110cfcfafdcf18e2312b41f">~TargetedExperiment</a>()</td><td class="entry"><a class="el" href="classOpenMS_1_1TargetedExperiment.html">TargetedExperiment</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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<TD><font color="#c0c0c0">OpenMS / TOPP release 1.11.1</font></TD>
<TD align="right"><font color="#c0c0c0">Documentation generated on Thu Nov 14 2013 11:19:27 using doxygen 1.8.5</font></TD>
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