1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
|
<HTML>
<HEAD>
<TITLE>XTandemXMLFile Class Reference</TITLE>
<LINK HREF="doxygen.css" REL="stylesheet" TYPE="text/css">
<LINK HREF="style_ini.css" REL="stylesheet" TYPE="text/css">
</HEAD>
<BODY BGCOLOR="#FFFFFF">
<A href="index.html">Home</A> ·
<A href="classes.html">Classes</A> ·
<A href="annotated.html">Annotated Classes</A> ·
<A href="modules.html">Modules</A> ·
<A href="functions_func.html">Members</A> ·
<A href="namespaces.html">Namespaces</A> ·
<A href="pages.html">Related Pages</A>
<HR style="height:1px; border:none; border-top:1px solid #c0c0c0;">
<!-- Generated by Doxygen 1.8.5 -->
<div id="nav-path" class="navpath">
<ul>
<li class="navelem"><a class="el" href="namespaceOpenMS.html">OpenMS</a></li><li class="navelem"><a class="el" href="classOpenMS_1_1XTandemXMLFile.html">XTandemXMLFile</a></li> </ul>
</div>
</div><!-- top -->
<div class="header">
<div class="summary">
<a href="#pub-methods">Public Member Functions</a> |
<a href="#pro-methods">Protected Member Functions</a> |
<a href="#pri-attribs">Private Attributes</a> |
<a href="classOpenMS_1_1XTandemXMLFile-members.html">List of all members</a> </div>
<div class="headertitle">
<div class="title">XTandemXMLFile Class Reference<div class="ingroups"><a class="el" href="group__FileIO.html">File IO</a></div></div> </div>
</div><!--header-->
<div class="contents">
<p>Used to load XTandemXML files.
<a href="classOpenMS_1_1XTandemXMLFile.html#details">More...</a></p>
<p><code>#include <<a class="el" href="XTandemXMLFile_8h_source.html">OpenMS/FORMAT/XTandemXMLFile.h</a>></code></p>
<div class="dynheader">
Inheritance diagram for XTandemXMLFile:</div>
<div class="dyncontent">
<div class="center">
<img src="classOpenMS_1_1XTandemXMLFile.png" usemap="#XTandemXMLFile_map" alt=""/>
<map id="XTandemXMLFile_map" name="XTandemXMLFile_map">
<area href="classOpenMS_1_1Internal_1_1XMLHandler.html" title="Base class for XML handlers. " alt="XMLHandler" shape="rect" coords="0,56,113,80"/>
<area href="classOpenMS_1_1Internal_1_1XMLFile.html" title="Base class for loading/storing XML files that have a handler derived from XMLHandler. " alt="XMLFile" shape="rect" coords="123,56,236,80"/>
</map>
</div></div>
<table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pub-methods"></a>
Public Member Functions</h2></td></tr>
<tr class="memitem:aed4d5c4ff46264c9e11aae3e2fbbff13"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1XTandemXMLFile.html#aed4d5c4ff46264c9e11aae3e2fbbff13">XTandemXMLFile</a> ()</td></tr>
<tr class="memdesc:aed4d5c4ff46264c9e11aae3e2fbbff13"><td class="mdescLeft"> </td><td class="mdescRight">Default constructor. <a href="#aed4d5c4ff46264c9e11aae3e2fbbff13">More...</a><br/></td></tr>
<tr class="separator:aed4d5c4ff46264c9e11aae3e2fbbff13"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a5fd9c87cc9c3215e31d441209a6387d1"><td class="memItemLeft" align="right" valign="top">virtual </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1XTandemXMLFile.html#a5fd9c87cc9c3215e31d441209a6387d1">~XTandemXMLFile</a> ()</td></tr>
<tr class="memdesc:a5fd9c87cc9c3215e31d441209a6387d1"><td class="mdescLeft"> </td><td class="mdescRight">Destructor. <a href="#a5fd9c87cc9c3215e31d441209a6387d1">More...</a><br/></td></tr>
<tr class="separator:a5fd9c87cc9c3215e31d441209a6387d1"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:gae6ff0d806cf1b17fc837c6242f6a38b7"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__FileIO.html#gae6ff0d806cf1b17fc837c6242f6a38b7">load</a> (const <a class="el" href="classOpenMS_1_1String.html">String</a> &filename, <a class="el" href="classOpenMS_1_1ProteinIdentification.html">ProteinIdentification</a> &protein_identification, std::vector< <a class="el" href="classOpenMS_1_1PeptideIdentification.html">PeptideIdentification</a> > &id_data)</td></tr>
<tr class="memdesc:gae6ff0d806cf1b17fc837c6242f6a38b7"><td class="mdescLeft"> </td><td class="mdescRight">loads data from a XTandemXML file <a href="group__FileIO.html#gae6ff0d806cf1b17fc837c6242f6a38b7">More...</a><br/></td></tr>
<tr class="separator:gae6ff0d806cf1b17fc837c6242f6a38b7"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:abd685262ded56d2cf23a452b4f61e1b4"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1XTandemXMLFile.html#abd685262ded56d2cf23a452b4f61e1b4">setModificationDefinitionsSet</a> (const <a class="el" href="classOpenMS_1_1ModificationDefinitionsSet.html">ModificationDefinitionsSet</a> &rhs)</td></tr>
<tr class="memdesc:abd685262ded56d2cf23a452b4f61e1b4"><td class="mdescLeft"> </td><td class="mdescRight">sets the valid modifications <a href="#abd685262ded56d2cf23a452b4f61e1b4">More...</a><br/></td></tr>
<tr class="separator:abd685262ded56d2cf23a452b4f61e1b4"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="inherit_header pub_methods_classOpenMS_1_1Internal_1_1XMLFile"><td colspan="2" onclick="javascript:toggleInherit('pub_methods_classOpenMS_1_1Internal_1_1XMLFile')"><img src="closed.png" alt="-"/> Public Member Functions inherited from <a class="el" href="classOpenMS_1_1Internal_1_1XMLFile.html">XMLFile</a></td></tr>
<tr class="memitem:a5288a663fb130ba112c205bd7c556fd4 inherit pub_methods_classOpenMS_1_1Internal_1_1XMLFile"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLFile.html#a5288a663fb130ba112c205bd7c556fd4">XMLFile</a> ()</td></tr>
<tr class="memdesc:a5288a663fb130ba112c205bd7c556fd4 inherit pub_methods_classOpenMS_1_1Internal_1_1XMLFile"><td class="mdescLeft"> </td><td class="mdescRight">Default constructor. <a href="#a5288a663fb130ba112c205bd7c556fd4">More...</a><br/></td></tr>
<tr class="separator:a5288a663fb130ba112c205bd7c556fd4 inherit pub_methods_classOpenMS_1_1Internal_1_1XMLFile"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:ab6a2f018df297124fba778512994282a inherit pub_methods_classOpenMS_1_1Internal_1_1XMLFile"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLFile.html#ab6a2f018df297124fba778512994282a">XMLFile</a> (const <a class="el" href="classOpenMS_1_1String.html">String</a> &schema_location, const <a class="el" href="classOpenMS_1_1String.html">String</a> &version)</td></tr>
<tr class="memdesc:ab6a2f018df297124fba778512994282a inherit pub_methods_classOpenMS_1_1Internal_1_1XMLFile"><td class="mdescLeft"> </td><td class="mdescRight">Constructor that sets the schema location. <a href="#ab6a2f018df297124fba778512994282a">More...</a><br/></td></tr>
<tr class="separator:ab6a2f018df297124fba778512994282a inherit pub_methods_classOpenMS_1_1Internal_1_1XMLFile"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:ae64064342fc97bdd2008c5a91cd6d9de inherit pub_methods_classOpenMS_1_1Internal_1_1XMLFile"><td class="memItemLeft" align="right" valign="top">virtual </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLFile.html#ae64064342fc97bdd2008c5a91cd6d9de">~XMLFile</a> ()</td></tr>
<tr class="memdesc:ae64064342fc97bdd2008c5a91cd6d9de inherit pub_methods_classOpenMS_1_1Internal_1_1XMLFile"><td class="mdescLeft"> </td><td class="mdescRight">Destructor. <a href="#ae64064342fc97bdd2008c5a91cd6d9de">More...</a><br/></td></tr>
<tr class="separator:ae64064342fc97bdd2008c5a91cd6d9de inherit pub_methods_classOpenMS_1_1Internal_1_1XMLFile"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a2f3216da86d8ced03f1b102a5c2e886c inherit pub_methods_classOpenMS_1_1Internal_1_1XMLFile"><td class="memItemLeft" align="right" valign="top">bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLFile.html#a2f3216da86d8ced03f1b102a5c2e886c">isValid</a> (const <a class="el" href="classOpenMS_1_1String.html">String</a> &filename, std::ostream &os=std::cerr)</td></tr>
<tr class="memdesc:a2f3216da86d8ced03f1b102a5c2e886c inherit pub_methods_classOpenMS_1_1Internal_1_1XMLFile"><td class="mdescLeft"> </td><td class="mdescRight">Checks if a file validates against the XML schema. <a href="#a2f3216da86d8ced03f1b102a5c2e886c">More...</a><br/></td></tr>
<tr class="separator:a2f3216da86d8ced03f1b102a5c2e886c inherit pub_methods_classOpenMS_1_1Internal_1_1XMLFile"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:ae6b3b4b6857bc1987282e2f29611dd41 inherit pub_methods_classOpenMS_1_1Internal_1_1XMLFile"><td class="memItemLeft" align="right" valign="top">const <a class="el" href="classOpenMS_1_1String.html">String</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLFile.html#ae6b3b4b6857bc1987282e2f29611dd41">getVersion</a> () const </td></tr>
<tr class="memdesc:ae6b3b4b6857bc1987282e2f29611dd41 inherit pub_methods_classOpenMS_1_1Internal_1_1XMLFile"><td class="mdescLeft"> </td><td class="mdescRight">return the version of the schema <a href="#ae6b3b4b6857bc1987282e2f29611dd41">More...</a><br/></td></tr>
<tr class="separator:ae6b3b4b6857bc1987282e2f29611dd41 inherit pub_methods_classOpenMS_1_1Internal_1_1XMLFile"><td class="memSeparator" colspan="2"> </td></tr>
</table><table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pro-methods"></a>
Protected Member Functions</h2></td></tr>
<tr class="memitem:a484c33c30ea480bd831a92847f61006e"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1XTandemXMLFile.html#a484c33c30ea480bd831a92847f61006e">startElement</a> (const XMLCh *const , const XMLCh *const , const XMLCh *const qname, const xercesc::Attributes &attributes)</td></tr>
<tr class="memdesc:a484c33c30ea480bd831a92847f61006e"><td class="mdescLeft"> </td><td class="mdescRight">Parsing method for opening tags. <a href="#a484c33c30ea480bd831a92847f61006e">More...</a><br/></td></tr>
<tr class="separator:a484c33c30ea480bd831a92847f61006e"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a9028634d022a74d1fc8db852d99984d6"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1XTandemXMLFile.html#a9028634d022a74d1fc8db852d99984d6">endElement</a> (const XMLCh *const , const XMLCh *const , const XMLCh *const qname)</td></tr>
<tr class="memdesc:a9028634d022a74d1fc8db852d99984d6"><td class="mdescLeft"> </td><td class="mdescRight">Parsing method for closing tags. <a href="#a9028634d022a74d1fc8db852d99984d6">More...</a><br/></td></tr>
<tr class="separator:a9028634d022a74d1fc8db852d99984d6"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:ad26a9c1a4e8450455de2fc5a5a136053"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1XTandemXMLFile.html#ad26a9c1a4e8450455de2fc5a5a136053">characters</a> (const XMLCh *const chars, const XMLSize_t)</td></tr>
<tr class="memdesc:ad26a9c1a4e8450455de2fc5a5a136053"><td class="mdescLeft"> </td><td class="mdescRight">Parsing method for character data. <a href="#ad26a9c1a4e8450455de2fc5a5a136053">More...</a><br/></td></tr>
<tr class="separator:ad26a9c1a4e8450455de2fc5a5a136053"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:aeac25d16c62cf64eab9296d8c4d5c9c2"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1XTandemXMLFile.html#aeac25d16c62cf64eab9296d8c4d5c9c2">XTandemXMLFile</a> (const <a class="el" href="classOpenMS_1_1XTandemXMLFile.html">XTandemXMLFile</a> &rhs)</td></tr>
<tr class="separator:aeac25d16c62cf64eab9296d8c4d5c9c2"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a57340b376ebdeee63625574178efbf46"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1XTandemXMLFile.html">XTandemXMLFile</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1XTandemXMLFile.html#a57340b376ebdeee63625574178efbf46">operator=</a> (const <a class="el" href="classOpenMS_1_1XTandemXMLFile.html">XTandemXMLFile</a> &rhs)</td></tr>
<tr class="separator:a57340b376ebdeee63625574178efbf46"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="inherit_header pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td colspan="2" onclick="javascript:toggleInherit('pro_methods_classOpenMS_1_1Internal_1_1XMLHandler')"><img src="closed.png" alt="-"/> Protected Member Functions inherited from <a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html">XMLHandler</a></td></tr>
<tr class="memitem:afa42ec5acb52289d25d125a69ca28611 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top">bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#afa42ec5acb52289d25d125a69ca28611">equal_</a> (const XMLCh *a, const XMLCh *b)</td></tr>
<tr class="memdesc:afa42ec5acb52289d25d125a69ca28611 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Returns if two xerces strings are equal. <a href="#afa42ec5acb52289d25d125a69ca28611">More...</a><br/></td></tr>
<tr class="separator:afa42ec5acb52289d25d125a69ca28611 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a2036f384f9e7f1259f0c147d24100a37 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a2036f384f9e7f1259f0c147d24100a37">writeUserParam_</a> (const <a class="el" href="classOpenMS_1_1String.html">String</a> &tag_name, std::ostream &os, const <a class="el" href="classOpenMS_1_1MetaInfoInterface.html">MetaInfoInterface</a> &meta, <a class="el" href="group__Concept.html#gaba0996d26f7be2572973245b51852757">UInt</a> indent) const </td></tr>
<tr class="memdesc:a2036f384f9e7f1259f0c147d24100a37 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Writes the content of <a class="el" href="classOpenMS_1_1MetaInfoInterface.html" title="Interface for classes that can store arbitrary meta information (Type-Name-Value tuples). ">MetaInfoInterface</a> to the file. <a href="#a2036f384f9e7f1259f0c147d24100a37">More...</a><br/></td></tr>
<tr class="separator:a2036f384f9e7f1259f0c147d24100a37 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a666aacffa457b641218b98fa7b47071e inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__Concept.html#ga7cc214a236ad3bb6ad435bdcf5262a3f">Int</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a666aacffa457b641218b98fa7b47071e">asInt_</a> (const <a class="el" href="classOpenMS_1_1String.html">String</a> &in)</td></tr>
<tr class="memdesc:a666aacffa457b641218b98fa7b47071e inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Conversion of a <a class="el" href="classOpenMS_1_1String.html" title="A more convenient string class. ">String</a> to an integer value. <a href="#a666aacffa457b641218b98fa7b47071e">More...</a><br/></td></tr>
<tr class="separator:a666aacffa457b641218b98fa7b47071e inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:acce0b8fbe7a5a90972407cc4ec2ae742 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__Concept.html#ga7cc214a236ad3bb6ad435bdcf5262a3f">Int</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#acce0b8fbe7a5a90972407cc4ec2ae742">asInt_</a> (const XMLCh *in)</td></tr>
<tr class="memdesc:acce0b8fbe7a5a90972407cc4ec2ae742 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Conversion of a Xerces string to an integer value. <a href="#acce0b8fbe7a5a90972407cc4ec2ae742">More...</a><br/></td></tr>
<tr class="separator:acce0b8fbe7a5a90972407cc4ec2ae742 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a8cec7757132342e4d52771f09113378b inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__Concept.html#gaba0996d26f7be2572973245b51852757">UInt</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a8cec7757132342e4d52771f09113378b">asUInt_</a> (const <a class="el" href="classOpenMS_1_1String.html">String</a> &in)</td></tr>
<tr class="memdesc:a8cec7757132342e4d52771f09113378b inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Conversion of a <a class="el" href="classOpenMS_1_1String.html" title="A more convenient string class. ">String</a> to an unsigned integer value. <a href="#a8cec7757132342e4d52771f09113378b">More...</a><br/></td></tr>
<tr class="separator:a8cec7757132342e4d52771f09113378b inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a48e8be8cff3d25b265c4f3b6a1c446b0 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classdouble.html">double</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a48e8be8cff3d25b265c4f3b6a1c446b0">asDouble_</a> (const <a class="el" href="classOpenMS_1_1String.html">String</a> &in)</td></tr>
<tr class="memdesc:a48e8be8cff3d25b265c4f3b6a1c446b0 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Conversion of a <a class="el" href="classOpenMS_1_1String.html" title="A more convenient string class. ">String</a> to a double value. <a href="#a48e8be8cff3d25b265c4f3b6a1c446b0">More...</a><br/></td></tr>
<tr class="separator:a48e8be8cff3d25b265c4f3b6a1c446b0 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:aa6a2e65ba3dc9581e4cb5a719ddace92 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top">float </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#aa6a2e65ba3dc9581e4cb5a719ddace92">asFloat_</a> (const <a class="el" href="classOpenMS_1_1String.html">String</a> &in)</td></tr>
<tr class="memdesc:aa6a2e65ba3dc9581e4cb5a719ddace92 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Conversion of a <a class="el" href="classOpenMS_1_1String.html" title="A more convenient string class. ">String</a> to a float value. <a href="#aa6a2e65ba3dc9581e4cb5a719ddace92">More...</a><br/></td></tr>
<tr class="separator:aa6a2e65ba3dc9581e4cb5a719ddace92 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a5dc26987442a8a81af7bbd43e2e48f4a inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top">bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a5dc26987442a8a81af7bbd43e2e48f4a">asBool_</a> (const <a class="el" href="classOpenMS_1_1String.html">String</a> &in)</td></tr>
<tr class="memdesc:a5dc26987442a8a81af7bbd43e2e48f4a inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Conversion of a string to a boolean value. <a href="#a5dc26987442a8a81af7bbd43e2e48f4a">More...</a><br/></td></tr>
<tr class="separator:a5dc26987442a8a81af7bbd43e2e48f4a inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:ae9988608535348608067112395e56562 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1DateTime.html">DateTime</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#ae9988608535348608067112395e56562">asDateTime_</a> (<a class="el" href="classOpenMS_1_1String.html">String</a> date_string)</td></tr>
<tr class="memdesc:ae9988608535348608067112395e56562 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Conversion of a xs:datetime string to a DataTime value. <a href="#ae9988608535348608067112395e56562">More...</a><br/></td></tr>
<tr class="separator:ae9988608535348608067112395e56562 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a9e474cc66784ceba31591381c45a7fda inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top">char * </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a9e474cc66784ceba31591381c45a7fda">attributeAsString_</a> (const xercesc::Attributes &a, const char *name) const </td></tr>
<tr class="memdesc:a9e474cc66784ceba31591381c45a7fda inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Converts an attribute to a <a class="el" href="classOpenMS_1_1String.html" title="A more convenient string class. ">String</a>. <a href="#a9e474cc66784ceba31591381c45a7fda">More...</a><br/></td></tr>
<tr class="separator:a9e474cc66784ceba31591381c45a7fda inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a72fc926d019cece725e2acca29ba6bd7 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__Concept.html#ga7cc214a236ad3bb6ad435bdcf5262a3f">Int</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a72fc926d019cece725e2acca29ba6bd7">attributeAsInt_</a> (const xercesc::Attributes &a, const char *name) const </td></tr>
<tr class="memdesc:a72fc926d019cece725e2acca29ba6bd7 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Converts an attribute to a Int. <a href="#a72fc926d019cece725e2acca29ba6bd7">More...</a><br/></td></tr>
<tr class="separator:a72fc926d019cece725e2acca29ba6bd7 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a8b86d61a994bea8fc963fb5ba58b53cc inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__Concept.html#gace75bfb1aba684e874dffee13738bd15">DoubleReal</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a8b86d61a994bea8fc963fb5ba58b53cc">attributeAsDouble_</a> (const xercesc::Attributes &a, const char *name) const </td></tr>
<tr class="memdesc:a8b86d61a994bea8fc963fb5ba58b53cc inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Converts an attribute to a DoubleReal. <a href="#a8b86d61a994bea8fc963fb5ba58b53cc">More...</a><br/></td></tr>
<tr class="separator:a8b86d61a994bea8fc963fb5ba58b53cc inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a6e998b95ac924dce7c79c389e0c7515a inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1DoubleList.html">DoubleList</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a6e998b95ac924dce7c79c389e0c7515a">attributeAsDoubleList_</a> (const xercesc::Attributes &a, const char *name) const </td></tr>
<tr class="memdesc:a6e998b95ac924dce7c79c389e0c7515a inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Converts an attribute to a <a class="el" href="classOpenMS_1_1DoubleList.html" title="DoubleReal list. ">DoubleList</a>. <a href="#a6e998b95ac924dce7c79c389e0c7515a">More...</a><br/></td></tr>
<tr class="separator:a6e998b95ac924dce7c79c389e0c7515a inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:abc312cc6190151275be5f511d36ca8d4 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1IntList.html">IntList</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#abc312cc6190151275be5f511d36ca8d4">attributeAsIntList_</a> (const xercesc::Attributes &a, const char *name) const </td></tr>
<tr class="memdesc:abc312cc6190151275be5f511d36ca8d4 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Converts an attribute to an <a class="el" href="classOpenMS_1_1IntList.html" title="Int list. ">IntList</a>. <a href="#abc312cc6190151275be5f511d36ca8d4">More...</a><br/></td></tr>
<tr class="separator:abc312cc6190151275be5f511d36ca8d4 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:aa4b445d152e82df2f8c8254d16f6215b inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1StringList.html">StringList</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#aa4b445d152e82df2f8c8254d16f6215b">attributeAsStringList_</a> (const xercesc::Attributes &a, const char *name) const </td></tr>
<tr class="memdesc:aa4b445d152e82df2f8c8254d16f6215b inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Converts an attribute to an <a class="el" href="classOpenMS_1_1StringList.html" title="String list. ">StringList</a>. <a href="#aa4b445d152e82df2f8c8254d16f6215b">More...</a><br/></td></tr>
<tr class="separator:aa4b445d152e82df2f8c8254d16f6215b inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a7c08febb7e7f52f2be01217ab2560178 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top">bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a7c08febb7e7f52f2be01217ab2560178">optionalAttributeAsString_</a> (<a class="el" href="classOpenMS_1_1String.html">String</a> &value, const xercesc::Attributes &a, const char *name) const </td></tr>
<tr class="memdesc:a7c08febb7e7f52f2be01217ab2560178 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Assigns the attribute content to the <a class="el" href="classOpenMS_1_1String.html" title="A more convenient string class. ">String</a> <em>value</em> if the attribute is present. <a href="#a7c08febb7e7f52f2be01217ab2560178">More...</a><br/></td></tr>
<tr class="separator:a7c08febb7e7f52f2be01217ab2560178 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:abad7c51846f619044d97dcd4b2dc1a58 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top">bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#abad7c51846f619044d97dcd4b2dc1a58">optionalAttributeAsInt_</a> (<a class="el" href="group__Concept.html#ga7cc214a236ad3bb6ad435bdcf5262a3f">Int</a> &value, const xercesc::Attributes &a, const char *name) const </td></tr>
<tr class="memdesc:abad7c51846f619044d97dcd4b2dc1a58 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Assigns the attribute content to the Int <em>value</em> if the attribute is present. <a href="#abad7c51846f619044d97dcd4b2dc1a58">More...</a><br/></td></tr>
<tr class="separator:abad7c51846f619044d97dcd4b2dc1a58 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:aba139b5879b8b0fe8e67d0630592c092 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top">bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#aba139b5879b8b0fe8e67d0630592c092">optionalAttributeAsUInt_</a> (<a class="el" href="group__Concept.html#gaba0996d26f7be2572973245b51852757">UInt</a> &value, const xercesc::Attributes &a, const char *name) const </td></tr>
<tr class="memdesc:aba139b5879b8b0fe8e67d0630592c092 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Assigns the attribute content to the UInt <em>value</em> if the attribute is present. <a href="#aba139b5879b8b0fe8e67d0630592c092">More...</a><br/></td></tr>
<tr class="separator:aba139b5879b8b0fe8e67d0630592c092 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a958ee97861f22f49d562abce6e258aa1 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top">bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a958ee97861f22f49d562abce6e258aa1">optionalAttributeAsDouble_</a> (<a class="el" href="group__Concept.html#gace75bfb1aba684e874dffee13738bd15">DoubleReal</a> &value, const xercesc::Attributes &a, const char *name) const </td></tr>
<tr class="memdesc:a958ee97861f22f49d562abce6e258aa1 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Assigns the attribute content to the DoubleReal <em>value</em> if the attribute is present. <a href="#a958ee97861f22f49d562abce6e258aa1">More...</a><br/></td></tr>
<tr class="separator:a958ee97861f22f49d562abce6e258aa1 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a50fb629d6e3a9db12a5858916616edfa inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top">bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a50fb629d6e3a9db12a5858916616edfa">optionalAttributeAsDoubleList_</a> (<a class="el" href="classOpenMS_1_1DoubleList.html">DoubleList</a> &value, const xercesc::Attributes &a, const char *name) const </td></tr>
<tr class="memdesc:a50fb629d6e3a9db12a5858916616edfa inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Assigns the attribute content to the <a class="el" href="classOpenMS_1_1DoubleList.html" title="DoubleReal list. ">DoubleList</a> <em>value</em> if the attribute is present. <a href="#a50fb629d6e3a9db12a5858916616edfa">More...</a><br/></td></tr>
<tr class="separator:a50fb629d6e3a9db12a5858916616edfa inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a05c8ac2143fb0e36774bd0973326c4f1 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top">bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a05c8ac2143fb0e36774bd0973326c4f1">optionalAttributeAsStringList_</a> (<a class="el" href="classOpenMS_1_1StringList.html">StringList</a> &value, const xercesc::Attributes &a, const char *name) const </td></tr>
<tr class="memdesc:a05c8ac2143fb0e36774bd0973326c4f1 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Assigns the attribute content to the <a class="el" href="classOpenMS_1_1StringList.html" title="String list. ">StringList</a> <em>value</em> if the attribute is present. <a href="#a05c8ac2143fb0e36774bd0973326c4f1">More...</a><br/></td></tr>
<tr class="separator:a05c8ac2143fb0e36774bd0973326c4f1 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:ab39e3f1ff99a6e677b0c918266645673 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top">bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#ab39e3f1ff99a6e677b0c918266645673">optionalAttributeAsIntList_</a> (<a class="el" href="classOpenMS_1_1IntList.html">IntList</a> &value, const xercesc::Attributes &a, const char *name) const </td></tr>
<tr class="memdesc:ab39e3f1ff99a6e677b0c918266645673 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Assigns the attribute content to the <a class="el" href="classOpenMS_1_1IntList.html" title="Int list. ">IntList</a> <em>value</em> if the attribute is present. <a href="#ab39e3f1ff99a6e677b0c918266645673">More...</a><br/></td></tr>
<tr class="separator:ab39e3f1ff99a6e677b0c918266645673 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:ad63dfd11e1161067d1634f7b92bee573 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top">char * </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#ad63dfd11e1161067d1634f7b92bee573">attributeAsString_</a> (const xercesc::Attributes &a, const XMLCh *name) const </td></tr>
<tr class="memdesc:ad63dfd11e1161067d1634f7b92bee573 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Converts an attribute to a <a class="el" href="classOpenMS_1_1String.html" title="A more convenient string class. ">String</a>. <a href="#ad63dfd11e1161067d1634f7b92bee573">More...</a><br/></td></tr>
<tr class="separator:ad63dfd11e1161067d1634f7b92bee573 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:af1c6de5bf11e4cb7ec9aa007da5c163f inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__Concept.html#ga7cc214a236ad3bb6ad435bdcf5262a3f">Int</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#af1c6de5bf11e4cb7ec9aa007da5c163f">attributeAsInt_</a> (const xercesc::Attributes &a, const XMLCh *name) const </td></tr>
<tr class="memdesc:af1c6de5bf11e4cb7ec9aa007da5c163f inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Converts an attribute to a Int. <a href="#af1c6de5bf11e4cb7ec9aa007da5c163f">More...</a><br/></td></tr>
<tr class="separator:af1c6de5bf11e4cb7ec9aa007da5c163f inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a1b66b54ff53c138638bebea5bea36cf9 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__Concept.html#gace75bfb1aba684e874dffee13738bd15">DoubleReal</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a1b66b54ff53c138638bebea5bea36cf9">attributeAsDouble_</a> (const xercesc::Attributes &a, const XMLCh *name) const </td></tr>
<tr class="memdesc:a1b66b54ff53c138638bebea5bea36cf9 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Converts an attribute to a DoubleReal. <a href="#a1b66b54ff53c138638bebea5bea36cf9">More...</a><br/></td></tr>
<tr class="separator:a1b66b54ff53c138638bebea5bea36cf9 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a54f3fb485e059c3cb16afc2235635fc0 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1DoubleList.html">DoubleList</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a54f3fb485e059c3cb16afc2235635fc0">attributeAsDoubleList_</a> (const xercesc::Attributes &a, const XMLCh *name) const </td></tr>
<tr class="memdesc:a54f3fb485e059c3cb16afc2235635fc0 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Converts an attribute to a <a class="el" href="classOpenMS_1_1DoubleList.html" title="DoubleReal list. ">DoubleList</a>. <a href="#a54f3fb485e059c3cb16afc2235635fc0">More...</a><br/></td></tr>
<tr class="separator:a54f3fb485e059c3cb16afc2235635fc0 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a5dc4ddd6685eb948019e1537d6fe9034 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1IntList.html">IntList</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a5dc4ddd6685eb948019e1537d6fe9034">attributeAsIntList_</a> (const xercesc::Attributes &a, const XMLCh *name) const </td></tr>
<tr class="memdesc:a5dc4ddd6685eb948019e1537d6fe9034 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Converts an attribute to a <a class="el" href="classOpenMS_1_1IntList.html" title="Int list. ">IntList</a>. <a href="#a5dc4ddd6685eb948019e1537d6fe9034">More...</a><br/></td></tr>
<tr class="separator:a5dc4ddd6685eb948019e1537d6fe9034 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:ac65e3edffffcaee33d18d735b8295661 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1StringList.html">StringList</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#ac65e3edffffcaee33d18d735b8295661">attributeAsStringList_</a> (const xercesc::Attributes &a, const XMLCh *name) const </td></tr>
<tr class="memdesc:ac65e3edffffcaee33d18d735b8295661 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Converts an attribute to a <a class="el" href="classOpenMS_1_1StringList.html" title="String list. ">StringList</a>. <a href="#ac65e3edffffcaee33d18d735b8295661">More...</a><br/></td></tr>
<tr class="separator:ac65e3edffffcaee33d18d735b8295661 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a8faacc5e743fd40965b5088409b2c22b inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top">bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a8faacc5e743fd40965b5088409b2c22b">optionalAttributeAsString_</a> (<a class="el" href="classOpenMS_1_1String.html">String</a> &value, const xercesc::Attributes &a, const XMLCh *name) const </td></tr>
<tr class="memdesc:a8faacc5e743fd40965b5088409b2c22b inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Assigns the attribute content to the <a class="el" href="classOpenMS_1_1String.html" title="A more convenient string class. ">String</a> <em>value</em> if the attribute is present. <a href="#a8faacc5e743fd40965b5088409b2c22b">More...</a><br/></td></tr>
<tr class="separator:a8faacc5e743fd40965b5088409b2c22b inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a2e667f2db91d4711dc89e63d61fbc42d inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top">bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a2e667f2db91d4711dc89e63d61fbc42d">optionalAttributeAsInt_</a> (<a class="el" href="group__Concept.html#ga7cc214a236ad3bb6ad435bdcf5262a3f">Int</a> &value, const xercesc::Attributes &a, const XMLCh *name) const </td></tr>
<tr class="memdesc:a2e667f2db91d4711dc89e63d61fbc42d inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Assigns the attribute content to the Int <em>value</em> if the attribute is present. <a href="#a2e667f2db91d4711dc89e63d61fbc42d">More...</a><br/></td></tr>
<tr class="separator:a2e667f2db91d4711dc89e63d61fbc42d inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:af1216a9eaddc5ea6a5aec32a2f63f42d inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top">bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#af1216a9eaddc5ea6a5aec32a2f63f42d">optionalAttributeAsUInt_</a> (<a class="el" href="group__Concept.html#gaba0996d26f7be2572973245b51852757">UInt</a> &value, const xercesc::Attributes &a, const XMLCh *name) const </td></tr>
<tr class="memdesc:af1216a9eaddc5ea6a5aec32a2f63f42d inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Assigns the attribute content to the UInt <em>value</em> if the attribute is present. <a href="#af1216a9eaddc5ea6a5aec32a2f63f42d">More...</a><br/></td></tr>
<tr class="separator:af1216a9eaddc5ea6a5aec32a2f63f42d inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:acc6bb4fc8db1bf5653be91ad6ffa92d7 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top">bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#acc6bb4fc8db1bf5653be91ad6ffa92d7">optionalAttributeAsDouble_</a> (<a class="el" href="group__Concept.html#gace75bfb1aba684e874dffee13738bd15">DoubleReal</a> &value, const xercesc::Attributes &a, const XMLCh *name) const </td></tr>
<tr class="memdesc:acc6bb4fc8db1bf5653be91ad6ffa92d7 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Assigns the attribute content to the DoubleReal <em>value</em> if the attribute is present. <a href="#acc6bb4fc8db1bf5653be91ad6ffa92d7">More...</a><br/></td></tr>
<tr class="separator:acc6bb4fc8db1bf5653be91ad6ffa92d7 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a2363e021cb7d1b71e437f3e0e90160de inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top">bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a2363e021cb7d1b71e437f3e0e90160de">optionalAttributeAsDoubleList_</a> (<a class="el" href="classOpenMS_1_1DoubleList.html">DoubleList</a> &value, const xercesc::Attributes &a, const XMLCh *name) const </td></tr>
<tr class="memdesc:a2363e021cb7d1b71e437f3e0e90160de inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Assigns the attribute content to the <a class="el" href="classOpenMS_1_1DoubleList.html" title="DoubleReal list. ">DoubleList</a> <em>value</em> if the attribute is present. <a href="#a2363e021cb7d1b71e437f3e0e90160de">More...</a><br/></td></tr>
<tr class="separator:a2363e021cb7d1b71e437f3e0e90160de inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a54465788da22f2da8b11a237e470a27e inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top">bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a54465788da22f2da8b11a237e470a27e">optionalAttributeAsIntList_</a> (<a class="el" href="classOpenMS_1_1IntList.html">IntList</a> &value, const xercesc::Attributes &a, const XMLCh *name) const </td></tr>
<tr class="memdesc:a54465788da22f2da8b11a237e470a27e inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Assigns the attribute content to the <a class="el" href="classOpenMS_1_1IntList.html" title="Int list. ">IntList</a> <em>value</em> if the attribute is present. <a href="#a54465788da22f2da8b11a237e470a27e">More...</a><br/></td></tr>
<tr class="separator:a54465788da22f2da8b11a237e470a27e inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:af1084b998ce1559ff34c1febcd8193fb inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top">bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#af1084b998ce1559ff34c1febcd8193fb">optionalAttributeAsStringList_</a> (<a class="el" href="classOpenMS_1_1StringList.html">StringList</a> &value, const xercesc::Attributes &a, const XMLCh *name) const </td></tr>
<tr class="memdesc:af1084b998ce1559ff34c1febcd8193fb inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Assigns the attribute content to the <a class="el" href="classOpenMS_1_1StringList.html" title="String list. ">StringList</a> <em>value</em> if the attribute is present. <a href="#af1084b998ce1559ff34c1febcd8193fb">More...</a><br/></td></tr>
<tr class="separator:af1084b998ce1559ff34c1febcd8193fb inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:ab42b06789e80b05f0b754201cb1deccc inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__Concept.html#gae113cb41304c6692c7bf5d0624dc6f0f">SignedSize</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#ab42b06789e80b05f0b754201cb1deccc">cvStringToEnum_</a> (const <a class="el" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a> section, const <a class="el" href="classOpenMS_1_1String.html">String</a> &term, const char *message, const <a class="el" href="group__Concept.html#gae113cb41304c6692c7bf5d0624dc6f0f">SignedSize</a> result_on_error=0)</td></tr>
<tr class="separator:ab42b06789e80b05f0b754201cb1deccc inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a1f2a4ba30e2b659550286b460e842503 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a1f2a4ba30e2b659550286b460e842503">XMLHandler</a> (const <a class="el" href="classOpenMS_1_1String.html">String</a> &filename, const <a class="el" href="classOpenMS_1_1String.html">String</a> &version)</td></tr>
<tr class="memdesc:a1f2a4ba30e2b659550286b460e842503 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Default constructor. <a href="#a1f2a4ba30e2b659550286b460e842503">More...</a><br/></td></tr>
<tr class="separator:a1f2a4ba30e2b659550286b460e842503 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:ae466820b5ac9b008d33937e7dc7a180b inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top">virtual </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#ae466820b5ac9b008d33937e7dc7a180b">~XMLHandler</a> ()</td></tr>
<tr class="memdesc:ae466820b5ac9b008d33937e7dc7a180b inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Destructor. <a href="#ae466820b5ac9b008d33937e7dc7a180b">More...</a><br/></td></tr>
<tr class="separator:ae466820b5ac9b008d33937e7dc7a180b inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:ad20897c5c8bd47f5d4005989bead0e55 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#ad20897c5c8bd47f5d4005989bead0e55">reset</a> ()</td></tr>
<tr class="memdesc:ad20897c5c8bd47f5d4005989bead0e55 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Release internal memory used for parsing (call. <a href="#ad20897c5c8bd47f5d4005989bead0e55">More...</a><br/></td></tr>
<tr class="separator:ad20897c5c8bd47f5d4005989bead0e55 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a8b468975f6696641be7ef3c4de304cf9 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a8b468975f6696641be7ef3c4de304cf9">fatalError</a> (<a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a6cc566e3bbfdcb8a5a9d85941238cef5">ActionMode</a> mode, const <a class="el" href="classOpenMS_1_1String.html">String</a> &msg, <a class="el" href="group__Concept.html#gaba0996d26f7be2572973245b51852757">UInt</a> line=0, <a class="el" href="group__Concept.html#gaba0996d26f7be2572973245b51852757">UInt</a> column=0) const </td></tr>
<tr class="memdesc:a8b468975f6696641be7ef3c4de304cf9 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Fatal error handler. Throws a ParseError exception. <a href="#a8b468975f6696641be7ef3c4de304cf9">More...</a><br/></td></tr>
<tr class="separator:a8b468975f6696641be7ef3c4de304cf9 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a9d340a52e4146988835f8f1ac9efab07 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a9d340a52e4146988835f8f1ac9efab07">error</a> (<a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a6cc566e3bbfdcb8a5a9d85941238cef5">ActionMode</a> mode, const <a class="el" href="classOpenMS_1_1String.html">String</a> &msg, <a class="el" href="group__Concept.html#gaba0996d26f7be2572973245b51852757">UInt</a> line=0, <a class="el" href="group__Concept.html#gaba0996d26f7be2572973245b51852757">UInt</a> column=0) const </td></tr>
<tr class="memdesc:a9d340a52e4146988835f8f1ac9efab07 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Error handler for recoverable errors. <a href="#a9d340a52e4146988835f8f1ac9efab07">More...</a><br/></td></tr>
<tr class="separator:a9d340a52e4146988835f8f1ac9efab07 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a02ac5e91757ddd89078f7a04386b95f1 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a02ac5e91757ddd89078f7a04386b95f1">warning</a> (<a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a6cc566e3bbfdcb8a5a9d85941238cef5">ActionMode</a> mode, const <a class="el" href="classOpenMS_1_1String.html">String</a> &msg, <a class="el" href="group__Concept.html#gaba0996d26f7be2572973245b51852757">UInt</a> line=0, <a class="el" href="group__Concept.html#gaba0996d26f7be2572973245b51852757">UInt</a> column=0) const </td></tr>
<tr class="memdesc:a02ac5e91757ddd89078f7a04386b95f1 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Warning handler. <a href="#a02ac5e91757ddd89078f7a04386b95f1">More...</a><br/></td></tr>
<tr class="separator:a02ac5e91757ddd89078f7a04386b95f1 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:ac758e589cc142657a0ff748a49038298 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#ac758e589cc142657a0ff748a49038298">writeTo</a> (std::ostream &)</td></tr>
<tr class="memdesc:ac758e589cc142657a0ff748a49038298 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Writes the contents to a stream. <a href="#ac758e589cc142657a0ff748a49038298">More...</a><br/></td></tr>
<tr class="separator:ac758e589cc142657a0ff748a49038298 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a0bc03d238ded5afdd53da91dbec5a9a4 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1String.html">String</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a0bc03d238ded5afdd53da91dbec5a9a4">errorString</a> ()</td></tr>
<tr class="memdesc:a0bc03d238ded5afdd53da91dbec5a9a4 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Returns the last error description. <a href="#a0bc03d238ded5afdd53da91dbec5a9a4">More...</a><br/></td></tr>
<tr class="separator:a0bc03d238ded5afdd53da91dbec5a9a4 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a479fa8182f39759e3b6c800419b7fe35 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a479fa8182f39759e3b6c800419b7fe35">fatalError</a> (const xercesc::SAXParseException &exception)</td></tr>
<tr class="separator:a479fa8182f39759e3b6c800419b7fe35 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:ae4ec481066391f85153ac035f3184178 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#ae4ec481066391f85153ac035f3184178">error</a> (const xercesc::SAXParseException &exception)</td></tr>
<tr class="separator:ae4ec481066391f85153ac035f3184178 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:af86a807dd4b1ed6f4ba006b9bcd24763 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#af86a807dd4b1ed6f4ba006b9bcd24763">warning</a> (const xercesc::SAXParseException &exception)</td></tr>
<tr class="separator:af86a807dd4b1ed6f4ba006b9bcd24763 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="inherit_header pro_methods_classOpenMS_1_1Internal_1_1XMLFile"><td colspan="2" onclick="javascript:toggleInherit('pro_methods_classOpenMS_1_1Internal_1_1XMLFile')"><img src="closed.png" alt="-"/> Protected Member Functions inherited from <a class="el" href="classOpenMS_1_1Internal_1_1XMLFile.html">XMLFile</a></td></tr>
<tr class="memitem:ab08cc6e67bde4d478045ece950deb32b inherit pro_methods_classOpenMS_1_1Internal_1_1XMLFile"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLFile.html#ab08cc6e67bde4d478045ece950deb32b">parse_</a> (const <a class="el" href="classOpenMS_1_1String.html">String</a> &filename, <a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html">XMLHandler</a> *handler)</td></tr>
<tr class="memdesc:ab08cc6e67bde4d478045ece950deb32b inherit pro_methods_classOpenMS_1_1Internal_1_1XMLFile"><td class="mdescLeft"> </td><td class="mdescRight">Parses the XML file given by <code>filename</code> using the handler given by <code>handler</code>. <a href="#ab08cc6e67bde4d478045ece950deb32b">More...</a><br/></td></tr>
<tr class="separator:ab08cc6e67bde4d478045ece950deb32b inherit pro_methods_classOpenMS_1_1Internal_1_1XMLFile"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:aa99a8fa1726ecc3b865167eea1c17db7 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLFile"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLFile.html#aa99a8fa1726ecc3b865167eea1c17db7">save_</a> (const <a class="el" href="classOpenMS_1_1String.html">String</a> &filename, <a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html">XMLHandler</a> *handler) const </td></tr>
<tr class="memdesc:aa99a8fa1726ecc3b865167eea1c17db7 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLFile"><td class="mdescLeft"> </td><td class="mdescRight">Stores the contents of the XML handler given by <code>handler</code> in the file given by <code>filename</code>. <a href="#aa99a8fa1726ecc3b865167eea1c17db7">More...</a><br/></td></tr>
<tr class="separator:aa99a8fa1726ecc3b865167eea1c17db7 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLFile"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a97478c2a7b5ed960dae2ac5da0c03045 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLFile"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLFile.html#a97478c2a7b5ed960dae2ac5da0c03045">enforceEncoding_</a> (const <a class="el" href="classOpenMS_1_1String.html">String</a> &encoding)</td></tr>
<tr class="separator:a97478c2a7b5ed960dae2ac5da0c03045 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLFile"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a5288a663fb130ba112c205bd7c556fd4 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLFile"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLFile.html#a5288a663fb130ba112c205bd7c556fd4">XMLFile</a> ()</td></tr>
<tr class="memdesc:a5288a663fb130ba112c205bd7c556fd4 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLFile"><td class="mdescLeft"> </td><td class="mdescRight">Default constructor. <a href="#a5288a663fb130ba112c205bd7c556fd4">More...</a><br/></td></tr>
<tr class="separator:a5288a663fb130ba112c205bd7c556fd4 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLFile"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:ab6a2f018df297124fba778512994282a inherit pro_methods_classOpenMS_1_1Internal_1_1XMLFile"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLFile.html#ab6a2f018df297124fba778512994282a">XMLFile</a> (const <a class="el" href="classOpenMS_1_1String.html">String</a> &schema_location, const <a class="el" href="classOpenMS_1_1String.html">String</a> &version)</td></tr>
<tr class="memdesc:ab6a2f018df297124fba778512994282a inherit pro_methods_classOpenMS_1_1Internal_1_1XMLFile"><td class="mdescLeft"> </td><td class="mdescRight">Constructor that sets the schema location. <a href="#ab6a2f018df297124fba778512994282a">More...</a><br/></td></tr>
<tr class="separator:ab6a2f018df297124fba778512994282a inherit pro_methods_classOpenMS_1_1Internal_1_1XMLFile"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:ae64064342fc97bdd2008c5a91cd6d9de inherit pro_methods_classOpenMS_1_1Internal_1_1XMLFile"><td class="memItemLeft" align="right" valign="top">virtual </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLFile.html#ae64064342fc97bdd2008c5a91cd6d9de">~XMLFile</a> ()</td></tr>
<tr class="memdesc:ae64064342fc97bdd2008c5a91cd6d9de inherit pro_methods_classOpenMS_1_1Internal_1_1XMLFile"><td class="mdescLeft"> </td><td class="mdescRight">Destructor. <a href="#ae64064342fc97bdd2008c5a91cd6d9de">More...</a><br/></td></tr>
<tr class="separator:ae64064342fc97bdd2008c5a91cd6d9de inherit pro_methods_classOpenMS_1_1Internal_1_1XMLFile"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a2f3216da86d8ced03f1b102a5c2e886c inherit pro_methods_classOpenMS_1_1Internal_1_1XMLFile"><td class="memItemLeft" align="right" valign="top">bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLFile.html#a2f3216da86d8ced03f1b102a5c2e886c">isValid</a> (const <a class="el" href="classOpenMS_1_1String.html">String</a> &filename, std::ostream &os=std::cerr)</td></tr>
<tr class="memdesc:a2f3216da86d8ced03f1b102a5c2e886c inherit pro_methods_classOpenMS_1_1Internal_1_1XMLFile"><td class="mdescLeft"> </td><td class="mdescRight">Checks if a file validates against the XML schema. <a href="#a2f3216da86d8ced03f1b102a5c2e886c">More...</a><br/></td></tr>
<tr class="separator:a2f3216da86d8ced03f1b102a5c2e886c inherit pro_methods_classOpenMS_1_1Internal_1_1XMLFile"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:ae6b3b4b6857bc1987282e2f29611dd41 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLFile"><td class="memItemLeft" align="right" valign="top">const <a class="el" href="classOpenMS_1_1String.html">String</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLFile.html#ae6b3b4b6857bc1987282e2f29611dd41">getVersion</a> () const </td></tr>
<tr class="memdesc:ae6b3b4b6857bc1987282e2f29611dd41 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLFile"><td class="mdescLeft"> </td><td class="mdescRight">return the version of the schema <a href="#ae6b3b4b6857bc1987282e2f29611dd41">More...</a><br/></td></tr>
<tr class="separator:ae6b3b4b6857bc1987282e2f29611dd41 inherit pro_methods_classOpenMS_1_1Internal_1_1XMLFile"><td class="memSeparator" colspan="2"> </td></tr>
</table><table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pri-attribs"></a>
Private Attributes</h2></td></tr>
<tr class="memitem:a06b27f556a6afd22c4753c6ab2d4fb32"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1ProteinIdentification.html">ProteinIdentification</a> * </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1XTandemXMLFile.html#a06b27f556a6afd22c4753c6ab2d4fb32">protein_identification_</a></td></tr>
<tr class="separator:a06b27f556a6afd22c4753c6ab2d4fb32"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:aa6f12f1725ce722e29025c3e20ead82e"><td class="memItemLeft" align="right" valign="top">bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1XTandemXMLFile.html#aa6f12f1725ce722e29025c3e20ead82e">protein_open_</a></td></tr>
<tr class="separator:aa6f12f1725ce722e29025c3e20ead82e"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a50039fd56a0759ebdcfb3cd0798f7dcd"><td class="memItemLeft" align="right" valign="top">bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1XTandemXMLFile.html#a50039fd56a0759ebdcfb3cd0798f7dcd">is_description_</a></td></tr>
<tr class="separator:a50039fd56a0759ebdcfb3cd0798f7dcd"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:acd0095030971876a406b843644d0db39"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1Map.html">Map</a>< <a class="el" href="group__Concept.html#gaba0996d26f7be2572973245b51852757">UInt</a>, std::vector<br class="typebreak"/>
< <a class="el" href="classOpenMS_1_1PeptideHit.html">PeptideHit</a> > > </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1XTandemXMLFile.html#acd0095030971876a406b843644d0db39">peptide_hits_</a></td></tr>
<tr class="separator:acd0095030971876a406b843644d0db39"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:ae3e1a50f18b3783c7403e2bdba116115"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1Map.html">Map</a>< <a class="el" href="classOpenMS_1_1String.html">String</a>, <a class="el" href="classOpenMS_1_1ProteinHit.html">ProteinHit</a> > </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1XTandemXMLFile.html#ae3e1a50f18b3783c7403e2bdba116115">protein_hits_</a></td></tr>
<tr class="separator:ae3e1a50f18b3783c7403e2bdba116115"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a64e0feb8aa057b68c2b07dd46a75ab7e"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1String.html">String</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1XTandemXMLFile.html#a64e0feb8aa057b68c2b07dd46a75ab7e">actual_protein_id_</a></td></tr>
<tr class="separator:a64e0feb8aa057b68c2b07dd46a75ab7e"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a92593c88b5f8c4d9ac7dc16ad6a0c4e5"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__Concept.html#ga7cc214a236ad3bb6ad435bdcf5262a3f">Int</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1XTandemXMLFile.html#a92593c88b5f8c4d9ac7dc16ad6a0c4e5">actual_charge_</a></td></tr>
<tr class="separator:a92593c88b5f8c4d9ac7dc16ad6a0c4e5"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a3e1c7a1c177b3dcbc3686e9ff1f8fa94"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__Concept.html#ga7cc214a236ad3bb6ad435bdcf5262a3f">Int</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1XTandemXMLFile.html#a3e1c7a1c177b3dcbc3686e9ff1f8fa94">actual_id_</a></td></tr>
<tr class="separator:a3e1c7a1c177b3dcbc3686e9ff1f8fa94"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a4efa4aca7642864fed4e7e4cca9e2a79"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1String.html">String</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1XTandemXMLFile.html#a4efa4aca7642864fed4e7e4cca9e2a79">tag_</a></td></tr>
<tr class="separator:a4efa4aca7642864fed4e7e4cca9e2a79"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a3f33a08afa9670af82a5b7390be8ce62"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__Concept.html#gaba0996d26f7be2572973245b51852757">UInt</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1XTandemXMLFile.html#a3f33a08afa9670af82a5b7390be8ce62">actual_start_</a></td></tr>
<tr class="separator:a3f33a08afa9670af82a5b7390be8ce62"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a8253875d5b4f07b83a8d339ccfb9b9fd"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__Concept.html#gaba0996d26f7be2572973245b51852757">UInt</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1XTandemXMLFile.html#a8253875d5b4f07b83a8d339ccfb9b9fd">actual_stop_</a></td></tr>
<tr class="separator:a8253875d5b4f07b83a8d339ccfb9b9fd"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a5bd43fa850d01d775ede410cfd336610"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1ModificationDefinitionsSet.html">ModificationDefinitionsSet</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1XTandemXMLFile.html#a5bd43fa850d01d775ede410cfd336610">mod_def_set_</a></td></tr>
<tr class="separator:a5bd43fa850d01d775ede410cfd336610"><td class="memSeparator" colspan="2"> </td></tr>
</table><table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="inherited"></a>
Additional Inherited Members</h2></td></tr>
<tr class="inherit_header pro_types_classOpenMS_1_1Internal_1_1XMLHandler"><td colspan="2" onclick="javascript:toggleInherit('pro_types_classOpenMS_1_1Internal_1_1XMLHandler')"><img src="closed.png" alt="-"/> Protected Types inherited from <a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html">XMLHandler</a></td></tr>
<tr class="memitem:a6cc566e3bbfdcb8a5a9d85941238cef5 inherit pro_types_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top">enum  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a6cc566e3bbfdcb8a5a9d85941238cef5">ActionMode</a> { <a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a6cc566e3bbfdcb8a5a9d85941238cef5a972dbcdf74cff71e20bdcfb53be9c391">LOAD</a>,
<a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a6cc566e3bbfdcb8a5a9d85941238cef5afeb01cb4572ba190cd7932e49446c480">STORE</a>
}</td></tr>
<tr class="memdesc:a6cc566e3bbfdcb8a5a9d85941238cef5"><td class="mdescLeft"> </td><td class="mdescRight">Action to set the current mode (for error messages) <a href="classOpenMS_1_1Internal_1_1XMLHandler.html#a6cc566e3bbfdcb8a5a9d85941238cef5">More...</a><br/></td></tr>
<tr class="separator:a6cc566e3bbfdcb8a5a9d85941238cef5 inherit pro_types_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="inherit_header pro_attribs_classOpenMS_1_1Internal_1_1XMLHandler"><td colspan="2" onclick="javascript:toggleInherit('pro_attribs_classOpenMS_1_1Internal_1_1XMLHandler')"><img src="closed.png" alt="-"/> Protected Attributes inherited from <a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html">XMLHandler</a></td></tr>
<tr class="memitem:a51b11736a292f64a76f20729bb699879 inherit pro_attribs_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1String.html">String</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a51b11736a292f64a76f20729bb699879">error_message_</a></td></tr>
<tr class="memdesc:a51b11736a292f64a76f20729bb699879 inherit pro_attribs_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Error message of the last error. <a href="#a51b11736a292f64a76f20729bb699879">More...</a><br/></td></tr>
<tr class="separator:a51b11736a292f64a76f20729bb699879 inherit pro_attribs_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a45e9455fa6290f5c2d1f179902bae53a inherit pro_attribs_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1String.html">String</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a45e9455fa6290f5c2d1f179902bae53a">file_</a></td></tr>
<tr class="memdesc:a45e9455fa6290f5c2d1f179902bae53a inherit pro_attribs_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="classOpenMS_1_1File.html" title="Basic file handling operations. ">File</a> name. <a href="#a45e9455fa6290f5c2d1f179902bae53a">More...</a><br/></td></tr>
<tr class="separator:a45e9455fa6290f5c2d1f179902bae53a inherit pro_attribs_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a4e87a8f69bbc06cd56776556dc1680ed inherit pro_attribs_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1String.html">String</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a4e87a8f69bbc06cd56776556dc1680ed">version_</a></td></tr>
<tr class="memdesc:a4e87a8f69bbc06cd56776556dc1680ed inherit pro_attribs_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Schema version. <a href="#a4e87a8f69bbc06cd56776556dc1680ed">More...</a><br/></td></tr>
<tr class="separator:a4e87a8f69bbc06cd56776556dc1680ed inherit pro_attribs_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a9baa4a46e0c6855a03e6263782e3fe8c inherit pro_attribs_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1Internal_1_1StringManager.html">StringManager</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a9baa4a46e0c6855a03e6263782e3fe8c">sm_</a></td></tr>
<tr class="memdesc:a9baa4a46e0c6855a03e6263782e3fe8c inherit pro_attribs_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Helper class for string conversion. <a href="#a9baa4a46e0c6855a03e6263782e3fe8c">More...</a><br/></td></tr>
<tr class="separator:a9baa4a46e0c6855a03e6263782e3fe8c inherit pro_attribs_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a11019255364568a4576df012500da50c inherit pro_attribs_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top">std::vector< <a class="el" href="classOpenMS_1_1String.html">String</a> > </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a11019255364568a4576df012500da50c">open_tags_</a></td></tr>
<tr class="memdesc:a11019255364568a4576df012500da50c inherit pro_attribs_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Stack of open XML tags. <a href="#a11019255364568a4576df012500da50c">More...</a><br/></td></tr>
<tr class="separator:a11019255364568a4576df012500da50c inherit pro_attribs_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a6476bfc5285236c19e7f731e43d05cdd inherit pro_attribs_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memItemLeft" align="right" valign="top">std::vector< std::vector<br class="typebreak"/>
< <a class="el" href="classOpenMS_1_1String.html">String</a> > > </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a6476bfc5285236c19e7f731e43d05cdd">cv_terms_</a></td></tr>
<tr class="memdesc:a6476bfc5285236c19e7f731e43d05cdd inherit pro_attribs_classOpenMS_1_1Internal_1_1XMLHandler"><td class="mdescLeft"> </td><td class="mdescRight">Array of CV term lists (one sublist denotes one term and it's children) <a href="#a6476bfc5285236c19e7f731e43d05cdd">More...</a><br/></td></tr>
<tr class="separator:a6476bfc5285236c19e7f731e43d05cdd inherit pro_attribs_classOpenMS_1_1Internal_1_1XMLHandler"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="inherit_header pro_attribs_classOpenMS_1_1Internal_1_1XMLFile"><td colspan="2" onclick="javascript:toggleInherit('pro_attribs_classOpenMS_1_1Internal_1_1XMLFile')"><img src="closed.png" alt="-"/> Protected Attributes inherited from <a class="el" href="classOpenMS_1_1Internal_1_1XMLFile.html">XMLFile</a></td></tr>
<tr class="memitem:aea8dd5b28e6057c3e2b3f296966431c3 inherit pro_attribs_classOpenMS_1_1Internal_1_1XMLFile"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1String.html">String</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLFile.html#aea8dd5b28e6057c3e2b3f296966431c3">schema_location_</a></td></tr>
<tr class="memdesc:aea8dd5b28e6057c3e2b3f296966431c3 inherit pro_attribs_classOpenMS_1_1Internal_1_1XMLFile"><td class="mdescLeft"> </td><td class="mdescRight">XML schema file location. <a href="#aea8dd5b28e6057c3e2b3f296966431c3">More...</a><br/></td></tr>
<tr class="separator:aea8dd5b28e6057c3e2b3f296966431c3 inherit pro_attribs_classOpenMS_1_1Internal_1_1XMLFile"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a5a33231ac1616a429e6533af15231951 inherit pro_attribs_classOpenMS_1_1Internal_1_1XMLFile"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1String.html">String</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLFile.html#a5a33231ac1616a429e6533af15231951">schema_version_</a></td></tr>
<tr class="memdesc:a5a33231ac1616a429e6533af15231951 inherit pro_attribs_classOpenMS_1_1Internal_1_1XMLFile"><td class="mdescLeft"> </td><td class="mdescRight">Version string. <a href="#a5a33231ac1616a429e6533af15231951">More...</a><br/></td></tr>
<tr class="separator:a5a33231ac1616a429e6533af15231951 inherit pro_attribs_classOpenMS_1_1Internal_1_1XMLFile"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a6b0159bfc4bc3062d47825cccfeec9cd inherit pro_attribs_classOpenMS_1_1Internal_1_1XMLFile"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1String.html">String</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLFile.html#a6b0159bfc4bc3062d47825cccfeec9cd">enforced_encoding_</a></td></tr>
<tr class="memdesc:a6b0159bfc4bc3062d47825cccfeec9cd inherit pro_attribs_classOpenMS_1_1Internal_1_1XMLFile"><td class="mdescLeft"> </td><td class="mdescRight">Encoding string that replaces the encoding (system dependend or specified in the XML). Disabled if empty. Used as a workaround for XTandem output xml. <a href="#a6b0159bfc4bc3062d47825cccfeec9cd">More...</a><br/></td></tr>
<tr class="separator:a6b0159bfc4bc3062d47825cccfeec9cd inherit pro_attribs_classOpenMS_1_1Internal_1_1XMLFile"><td class="memSeparator" colspan="2"> </td></tr>
</table>
<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
<div class="textblock"><p>Used to load XTandemXML files. </p>
<p>This class is used to load documents that implement the schema of XTandemXML files. </p>
</div><h2 class="groupheader">Constructor & Destructor Documentation</h2>
<a class="anchor" id="aed4d5c4ff46264c9e11aae3e2fbbff13"></a>
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname"><a class="el" href="classOpenMS_1_1XTandemXMLFile.html">XTandemXMLFile</a> </td>
<td>(</td>
<td class="paramname"></td><td>)</td>
<td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Default constructor. </p>
</div>
</div>
<a class="anchor" id="a5fd9c87cc9c3215e31d441209a6387d1"></a>
<div class="memitem">
<div class="memproto">
<table class="mlabels">
<tr>
<td class="mlabels-left">
<table class="memname">
<tr>
<td class="memname">virtual ~<a class="el" href="classOpenMS_1_1XTandemXMLFile.html">XTandemXMLFile</a> </td>
<td>(</td>
<td class="paramname"></td><td>)</td>
<td></td>
</tr>
</table>
</td>
<td class="mlabels-right">
<span class="mlabels"><span class="mlabel">virtual</span></span> </td>
</tr>
</table>
</div><div class="memdoc">
<p>Destructor. </p>
</div>
</div>
<a class="anchor" id="aeac25d16c62cf64eab9296d8c4d5c9c2"></a>
<div class="memitem">
<div class="memproto">
<table class="mlabels">
<tr>
<td class="mlabels-left">
<table class="memname">
<tr>
<td class="memname"><a class="el" href="classOpenMS_1_1XTandemXMLFile.html">XTandemXMLFile</a> </td>
<td>(</td>
<td class="paramtype">const <a class="el" href="classOpenMS_1_1XTandemXMLFile.html">XTandemXMLFile</a> & </td>
<td class="paramname"><em>rhs</em></td><td>)</td>
<td></td>
</tr>
</table>
</td>
<td class="mlabels-right">
<span class="mlabels"><span class="mlabel">protected</span></span> </td>
</tr>
</table>
</div><div class="memdoc">
</div>
</div>
<h2 class="groupheader">Member Function Documentation</h2>
<a class="anchor" id="ad26a9c1a4e8450455de2fc5a5a136053"></a>
<div class="memitem">
<div class="memproto">
<table class="mlabels">
<tr>
<td class="mlabels-left">
<table class="memname">
<tr>
<td class="memname">void characters </td>
<td>(</td>
<td class="paramtype">const XMLCh *const </td>
<td class="paramname"><em>chars</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">const XMLSize_t </td>
<td class="paramname"><em>length</em> </td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</td>
<td class="mlabels-right">
<span class="mlabels"><span class="mlabel">protected</span><span class="mlabel">virtual</span></span> </td>
</tr>
</table>
</div><div class="memdoc">
<p>Parsing method for character data. </p>
<p>Reimplemented from <a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#ad14063bc858ff5ef2f218f9ec3efa1a6">XMLHandler</a>.</p>
</div>
</div>
<a class="anchor" id="a9028634d022a74d1fc8db852d99984d6"></a>
<div class="memitem">
<div class="memproto">
<table class="mlabels">
<tr>
<td class="mlabels-left">
<table class="memname">
<tr>
<td class="memname">void endElement </td>
<td>(</td>
<td class="paramtype">const XMLCh * </td>
<td class="paramname"><em>uri</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">const XMLCh * </td>
<td class="paramname"><em>localname</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">const XMLCh *const </td>
<td class="paramname"><em>qname</em> </td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</td>
<td class="mlabels-right">
<span class="mlabels"><span class="mlabel">protected</span><span class="mlabel">virtual</span></span> </td>
</tr>
</table>
</div><div class="memdoc">
<p>Parsing method for closing tags. </p>
<p>Reimplemented from <a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#ad44143319b25de70f8b652fded0d0e75">XMLHandler</a>.</p>
</div>
</div>
<a class="anchor" id="a57340b376ebdeee63625574178efbf46"></a>
<div class="memitem">
<div class="memproto">
<table class="mlabels">
<tr>
<td class="mlabels-left">
<table class="memname">
<tr>
<td class="memname"><a class="el" href="classOpenMS_1_1XTandemXMLFile.html">XTandemXMLFile</a>& operator= </td>
<td>(</td>
<td class="paramtype">const <a class="el" href="classOpenMS_1_1XTandemXMLFile.html">XTandemXMLFile</a> & </td>
<td class="paramname"><em>rhs</em></td><td>)</td>
<td></td>
</tr>
</table>
</td>
<td class="mlabels-right">
<span class="mlabels"><span class="mlabel">protected</span></span> </td>
</tr>
</table>
</div><div class="memdoc">
</div>
</div>
<a class="anchor" id="abd685262ded56d2cf23a452b4f61e1b4"></a>
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">void setModificationDefinitionsSet </td>
<td>(</td>
<td class="paramtype">const <a class="el" href="classOpenMS_1_1ModificationDefinitionsSet.html">ModificationDefinitionsSet</a> & </td>
<td class="paramname"><em>rhs</em></td><td>)</td>
<td></td>
</tr>
</table>
</div><div class="memdoc">
<p>sets the valid modifications </p>
</div>
</div>
<a class="anchor" id="a484c33c30ea480bd831a92847f61006e"></a>
<div class="memitem">
<div class="memproto">
<table class="mlabels">
<tr>
<td class="mlabels-left">
<table class="memname">
<tr>
<td class="memname">void startElement </td>
<td>(</td>
<td class="paramtype">const XMLCh * </td>
<td class="paramname"><em>uri</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">const XMLCh * </td>
<td class="paramname"><em>localname</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">const XMLCh *const </td>
<td class="paramname"><em>qname</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">const xercesc::Attributes & </td>
<td class="paramname"><em>attrs</em> </td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</td>
<td class="mlabels-right">
<span class="mlabels"><span class="mlabel">protected</span><span class="mlabel">virtual</span></span> </td>
</tr>
</table>
</div><div class="memdoc">
<p>Parsing method for opening tags. </p>
<p>Reimplemented from <a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#a769cd98c6f960e3df9fcb878e14318e8">XMLHandler</a>.</p>
</div>
</div>
<h2 class="groupheader">Member Data Documentation</h2>
<a class="anchor" id="a92593c88b5f8c4d9ac7dc16ad6a0c4e5"></a>
<div class="memitem">
<div class="memproto">
<table class="mlabels">
<tr>
<td class="mlabels-left">
<table class="memname">
<tr>
<td class="memname"><a class="el" href="group__Concept.html#ga7cc214a236ad3bb6ad435bdcf5262a3f">Int</a> actual_charge_</td>
</tr>
</table>
</td>
<td class="mlabels-right">
<span class="mlabels"><span class="mlabel">private</span></span> </td>
</tr>
</table>
</div><div class="memdoc">
</div>
</div>
<a class="anchor" id="a3e1c7a1c177b3dcbc3686e9ff1f8fa94"></a>
<div class="memitem">
<div class="memproto">
<table class="mlabels">
<tr>
<td class="mlabels-left">
<table class="memname">
<tr>
<td class="memname"><a class="el" href="group__Concept.html#ga7cc214a236ad3bb6ad435bdcf5262a3f">Int</a> actual_id_</td>
</tr>
</table>
</td>
<td class="mlabels-right">
<span class="mlabels"><span class="mlabel">private</span></span> </td>
</tr>
</table>
</div><div class="memdoc">
</div>
</div>
<a class="anchor" id="a64e0feb8aa057b68c2b07dd46a75ab7e"></a>
<div class="memitem">
<div class="memproto">
<table class="mlabels">
<tr>
<td class="mlabels-left">
<table class="memname">
<tr>
<td class="memname"><a class="el" href="classOpenMS_1_1String.html">String</a> actual_protein_id_</td>
</tr>
</table>
</td>
<td class="mlabels-right">
<span class="mlabels"><span class="mlabel">private</span></span> </td>
</tr>
</table>
</div><div class="memdoc">
</div>
</div>
<a class="anchor" id="a3f33a08afa9670af82a5b7390be8ce62"></a>
<div class="memitem">
<div class="memproto">
<table class="mlabels">
<tr>
<td class="mlabels-left">
<table class="memname">
<tr>
<td class="memname"><a class="el" href="group__Concept.html#gaba0996d26f7be2572973245b51852757">UInt</a> actual_start_</td>
</tr>
</table>
</td>
<td class="mlabels-right">
<span class="mlabels"><span class="mlabel">private</span></span> </td>
</tr>
</table>
</div><div class="memdoc">
</div>
</div>
<a class="anchor" id="a8253875d5b4f07b83a8d339ccfb9b9fd"></a>
<div class="memitem">
<div class="memproto">
<table class="mlabels">
<tr>
<td class="mlabels-left">
<table class="memname">
<tr>
<td class="memname"><a class="el" href="group__Concept.html#gaba0996d26f7be2572973245b51852757">UInt</a> actual_stop_</td>
</tr>
</table>
</td>
<td class="mlabels-right">
<span class="mlabels"><span class="mlabel">private</span></span> </td>
</tr>
</table>
</div><div class="memdoc">
</div>
</div>
<a class="anchor" id="a50039fd56a0759ebdcfb3cd0798f7dcd"></a>
<div class="memitem">
<div class="memproto">
<table class="mlabels">
<tr>
<td class="mlabels-left">
<table class="memname">
<tr>
<td class="memname">bool is_description_</td>
</tr>
</table>
</td>
<td class="mlabels-right">
<span class="mlabels"><span class="mlabel">private</span></span> </td>
</tr>
</table>
</div><div class="memdoc">
</div>
</div>
<a class="anchor" id="a5bd43fa850d01d775ede410cfd336610"></a>
<div class="memitem">
<div class="memproto">
<table class="mlabels">
<tr>
<td class="mlabels-left">
<table class="memname">
<tr>
<td class="memname"><a class="el" href="classOpenMS_1_1ModificationDefinitionsSet.html">ModificationDefinitionsSet</a> mod_def_set_</td>
</tr>
</table>
</td>
<td class="mlabels-right">
<span class="mlabels"><span class="mlabel">private</span></span> </td>
</tr>
</table>
</div><div class="memdoc">
</div>
</div>
<a class="anchor" id="acd0095030971876a406b843644d0db39"></a>
<div class="memitem">
<div class="memproto">
<table class="mlabels">
<tr>
<td class="mlabels-left">
<table class="memname">
<tr>
<td class="memname"><a class="el" href="classOpenMS_1_1Map.html">Map</a><<a class="el" href="group__Concept.html#gaba0996d26f7be2572973245b51852757">UInt</a>, std::vector<<a class="el" href="classOpenMS_1_1PeptideHit.html">PeptideHit</a>> > peptide_hits_</td>
</tr>
</table>
</td>
<td class="mlabels-right">
<span class="mlabels"><span class="mlabel">private</span></span> </td>
</tr>
</table>
</div><div class="memdoc">
</div>
</div>
<a class="anchor" id="ae3e1a50f18b3783c7403e2bdba116115"></a>
<div class="memitem">
<div class="memproto">
<table class="mlabels">
<tr>
<td class="mlabels-left">
<table class="memname">
<tr>
<td class="memname"><a class="el" href="classOpenMS_1_1Map.html">Map</a><<a class="el" href="classOpenMS_1_1String.html">String</a>, <a class="el" href="classOpenMS_1_1ProteinHit.html">ProteinHit</a>> protein_hits_</td>
</tr>
</table>
</td>
<td class="mlabels-right">
<span class="mlabels"><span class="mlabel">private</span></span> </td>
</tr>
</table>
</div><div class="memdoc">
</div>
</div>
<a class="anchor" id="a06b27f556a6afd22c4753c6ab2d4fb32"></a>
<div class="memitem">
<div class="memproto">
<table class="mlabels">
<tr>
<td class="mlabels-left">
<table class="memname">
<tr>
<td class="memname"><a class="el" href="classOpenMS_1_1ProteinIdentification.html">ProteinIdentification</a>* protein_identification_</td>
</tr>
</table>
</td>
<td class="mlabels-right">
<span class="mlabels"><span class="mlabel">private</span></span> </td>
</tr>
</table>
</div><div class="memdoc">
</div>
</div>
<a class="anchor" id="aa6f12f1725ce722e29025c3e20ead82e"></a>
<div class="memitem">
<div class="memproto">
<table class="mlabels">
<tr>
<td class="mlabels-left">
<table class="memname">
<tr>
<td class="memname">bool protein_open_</td>
</tr>
</table>
</td>
<td class="mlabels-right">
<span class="mlabels"><span class="mlabel">private</span></span> </td>
</tr>
</table>
</div><div class="memdoc">
</div>
</div>
<a class="anchor" id="a4efa4aca7642864fed4e7e4cca9e2a79"></a>
<div class="memitem">
<div class="memproto">
<table class="mlabels">
<tr>
<td class="mlabels-left">
<table class="memname">
<tr>
<td class="memname"><a class="el" href="classOpenMS_1_1String.html">String</a> tag_</td>
</tr>
</table>
</td>
<td class="mlabels-right">
<span class="mlabels"><span class="mlabel">private</span></span> </td>
</tr>
</table>
</div><div class="memdoc">
</div>
</div>
</div><!-- contents -->
<HR style="height:1px; border:none; border-top:1px solid #c0c0c0;">
<TABLE width="100%" border="0">
<TR>
<TD><font color="#c0c0c0">OpenMS / TOPP release 1.11.1</font></TD>
<TD align="right"><font color="#c0c0c0">Documentation generated on Thu Nov 14 2013 11:19:31 using doxygen 1.8.5</font></TD>
</TR>
</TABLE>
</BODY>
</HTML>
|
