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|
<HTML>
<HEAD>
<TITLE>Class Members</TITLE>
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<div class="contents">
<div class="textblock">Here is a list of all class members with links to the classes they belong to:</div>
<h3><a class="anchor" id="index_r"></a>- r -</h3><ul>
<li>r_r_obj_
: <a class="el" href="classOpenMS_1_1Internal_1_1MzQuantMLHandler.html#a2ee174601c949239044862c5fee394c9">MzQuantMLHandler</a>
</li>
<li>r_rtemp_
: <a class="el" href="classOpenMS_1_1Internal_1_1MzQuantMLHandler.html#a039dc3897ce8684641fbbef279f185d5">MzQuantMLHandler</a>
</li>
<li>r_squared_
: <a class="el" href="classOpenMS_1_1Math_1_1LinearRegression.html#a1243d6935368ecf2a9c9b69db96047fd">LinearRegression</a>
</li>
<li>r_value
: <a class="el" href="structOpenMS_1_1PeakShape.html#acec96c76b28be5f89d2966092930e242">PeakShape</a>
</li>
<li>RADIALEJECTIONLINEARIONTRAP
: <a class="el" href="classOpenMS_1_1MassAnalyzer.html#a134230547dd6de10b20f6904d9422ec3a3da723842841c3ff4194d0d71b0da0fd">MassAnalyzer</a>
</li>
<li>radius
: <a class="el" href="structOpenMS_1_1LocalLinearMap_1_1LLMParam.html#a5ba495b5ed499e9340ba75999ec131b4">LocalLinearMap::LLMParam</a>
</li>
<li>radius_
: <a class="el" href="classOpenMS_1_1PeakPickerCWT.html#a1d6c2998e5ce95455a58ab8e2ddf04e8">PeakPickerCWT</a>
</li>
<li>rand_gen_
: <a class="el" href="classOpenMS_1_1ConfidenceScoring.html#a565f3f62b93681901b2582a5678cb3bf">ConfidenceScoring</a>
</li>
<li>random()
: <a class="el" href="classOpenMS_1_1String.html#ab94ade532737a87a621e0e880abd1937">String</a>
</li>
<li>range
: <a class="el" href="structOpenMS_1_1SILACFiltering_1_1BlacklistEntry.html#a572b06b0b5a1a7ab7757e42b0d4f5691">SILACFiltering::BlacklistEntry</a>
</li>
<li>RangeManager()
: <a class="el" href="classOpenMS_1_1RangeManager.html#a2819d7889d3f7ecd7441d8e57811a03f">RangeManager< D ></a>
</li>
<li>RangeManagerType
: <a class="el" href="classOpenMS_1_1ConsensusMap.html#a035217389fa12c02d059ddfb29c459e1">ConsensusMap</a>
, <a class="el" href="classOpenMS_1_1FeatureMap.html#a035217389fa12c02d059ddfb29c459e1">FeatureMap< FeatureT ></a>
, <a class="el" href="classOpenMS_1_1MSExperiment.html#a035217389fa12c02d059ddfb29c459e1">MSExperiment< PeakT, ChromatogramPeakT ></a>
</li>
<li>rank_
: <a class="el" href="classOpenMS_1_1IdentificationHit.html#ab6e704d76fa6d4ab1114e56e5bbe21c6">IdentificationHit</a>
, <a class="el" href="classOpenMS_1_1PeptideHit.html#a4b3d987afc8cebd1a59fb53b3c0bd99c">PeptideHit</a>
, <a class="el" href="classOpenMS_1_1ProteinHit.html#a4b3d987afc8cebd1a59fb53b3c0bd99c">ProteinHit</a>
</li>
<li>rank_sp_weights_
: <a class="el" href="classOpenMS_1_1SequestOutfile.html#a71f0e555afd0d4a2e48b71dad00ba762">SequestOutfile</a>
</li>
<li>ranked_()
: <a class="el" href="classOpenMS_1_1ConsensusID.html#a2ed2c84a38290b3b6409617a38cc2019">ConsensusID</a>
</li>
<li>raster()
: <a class="el" href="classOpenMS_1_1LinearResampler.html#ab610fcc25c710938dccd156c33421773">LinearResampler</a>
, <a class="el" href="classOpenMS_1_1LinearResamplerAlign.html#ac0856b2b1e7528e72df9b2b64c367b72">LinearResamplerAlign</a>
</li>
<li>raster_align()
: <a class="el" href="classOpenMS_1_1LinearResamplerAlign.html#af797844f93322867447bc34e956ac93a">LinearResamplerAlign</a>
</li>
<li>raster_interpolate()
: <a class="el" href="classOpenMS_1_1LinearResamplerAlign.html#a3854ad11b8910149c8010a326994bba8">LinearResamplerAlign</a>
</li>
<li>rasterExperiment()
: <a class="el" href="classOpenMS_1_1LinearResampler.html#a48a6496f271f68218b1f197a7b7afae3">LinearResampler</a>
</li>
<li>Ratio()
: <a class="el" href="structOpenMS_1_1ConsensusFeature_1_1Ratio.html#adb6575b11094b4bc4d2364049459c334">ConsensusFeature::Ratio</a>
</li>
<li>ratio_max_
: <a class="el" href="classOpenMS_1_1FuzzyStringComparator.html#a93d483a2d451e7382aab6a885011225e">FuzzyStringComparator</a>
</li>
<li>ratio_max_allowed_
: <a class="el" href="classOpenMS_1_1FuzzyStringComparator.html#a02dd1af598a1b912b0bad7dd92d8c5ae">FuzzyStringComparator</a>
</li>
<li>ratio_value_
: <a class="el" href="structOpenMS_1_1ConsensusFeature_1_1Ratio.html#af46abcc85c911e717e567bddd38d0f0b">ConsensusFeature::Ratio</a>
</li>
<li>ratios_
: <a class="el" href="classOpenMS_1_1ConsensusFeature.html#a99da49a402181e9000cb53a50bec5393">ConsensusFeature</a>
</li>
<li>raw_data_first
: <a class="el" href="structOpenMS_1_1TwoDOptimization_1_1Data.html#a16930394d61d06ff8227219211874592">TwoDOptimization::Data</a>
</li>
<li>raw_files_
: <a class="el" href="structOpenMS_1_1MSQuantifications_1_1Assay.html#a5e0f51092f05b281188e0051d499b07c">MSQuantifications::Assay</a>
</li>
<li>raw_spec_names
: <a class="el" href="classOpenMS_1_1LCMS.html#aa9a3ceeb8749addce3de62f4b0ca612e">LCMS</a>
</li>
<li>RAWDATA
: <a class="el" href="classOpenMS_1_1SpectrumSettings.html#ab7b974cef152e339967fce62f49de0d9ac4247d1d6a6d7690023932e58b441533">SpectrumSettings</a>
</li>
<li>RawData()
: <a class="el" href="classOpenMS_1_1RawData.html#a5247ab3ae7d578fc08041a327c3a7b7d">RawData</a>
</li>
<li>RawDataArrayType
: <a class="el" href="structOpenMS_1_1EGHFitter1D_1_1Data.html#a31ac7361125f91f71e3d07be39a76023">EGHFitter1D::Data</a>
, <a class="el" href="structOpenMS_1_1EmgFitter1D_1_1Data.html#a31ac7361125f91f71e3d07be39a76023">EmgFitter1D::Data</a>
, <a class="el" href="classOpenMS_1_1Fitter1D.html#a31ac7361125f91f71e3d07be39a76023">Fitter1D</a>
, <a class="el" href="structOpenMS_1_1LmaGaussFitter1D_1_1Data.html#a31ac7361125f91f71e3d07be39a76023">LmaGaussFitter1D::Data</a>
, <a class="el" href="structOpenMS_1_1LmaIsotopeFitter1D_1_1Data.html#a31ac7361125f91f71e3d07be39a76023">LmaIsotopeFitter1D::Data</a>
, <a class="el" href="classOpenMS_1_1ModelFitter.html#a31ac7361125f91f71e3d07be39a76023">ModelFitter< PeakType, FeatureType ></a>
</li>
<li>RawDataVector
: <a class="el" href="classOpenMS_1_1OptimizePeakDeconvolution.html#a1b5cab7fcfe8ad040fb7363dd14913f1">OptimizePeakDeconvolution</a>
, <a class="el" href="classOpenMS_1_1OptimizePick.html#a1b5cab7fcfe8ad040fb7363dd14913f1">OptimizePick</a>
</li>
<li>rawIsotopes_
: <a class="el" href="classOpenMS_1_1ConsensusIsotopePattern.html#aa283657eb5ff36663369cf80142d0f2d">ConsensusIsotopePattern</a>
</li>
<li>RawMSSignalSimulation()
: <a class="el" href="classOpenMS_1_1RawMSSignalSimulation.html#a1bed7cf19b2d607e4731971259142990">RawMSSignalSimulation</a>
</li>
<li>RawTandemMSSignalSimulation()
: <a class="el" href="classOpenMS_1_1RawTandemMSSignalSimulation.html#a203261f68fddcfa0b954f6fd0054f3ef">RawTandemMSSignalSimulation</a>
</li>
<li>rbegin()
: <a class="el" href="classOpenMS_1_1ConstRefVector.html#ae96419348e21330d09c5f6f2cb74118a">ConstRefVector< ContainerT ></a>
, <a class="el" href="classOpenMS_1_1SparseVector.html#acea44ed500a54b2bb93e16b86e81afa8">SparseVector< Value ></a>
, <a class="el" href="classOpenMS_1_1ConsensusFeature.html#a04886aa70c34d66738e78bf70c675e66">ConsensusFeature</a>
, <a class="el" href="classOpenMS_1_1MassTrace.html#acea44ed500a54b2bb93e16b86e81afa8">MassTrace</a>
</li>
<li>rdbuf()
: <a class="el" href="classOpenMS_1_1Logger_1_1LogStream.html#a50ef5d2bea80f487a164d772bf31350a">LogStream</a>
</li>
<li>reachable_
: <a class="el" href="classOpenMS_1_1TOPPASVertex.html#ac4dc8f3cd84dada9ba185025e46079f1">TOPPASVertex</a>
</li>
<li>ReactionMonitoringTransition()
: <a class="el" href="classOpenMS_1_1ReactionMonitoringTransition.html#a001a1196e08fdef7cfb59776195c4773">ReactionMonitoringTransition</a>
</li>
<li>read()
: <a class="el" href="classOpenMS_1_1Bzip2Ifstream.html#a793774797473f3e8ed6a073df8f84a52">Bzip2Ifstream</a>
, <a class="el" href="classOpenMS_1_1GzipIfstream.html#a793774797473f3e8ed6a073df8f84a52">GzipIfstream</a>
</li>
<li>readable()
: <a class="el" href="classOpenMS_1_1File.html#abd34aea245381ce44044c36ce1895470">File</a>
</li>
<li>readBytes()
: <a class="el" href="classOpenMS_1_1Bzip2InputStream.html#a1fdd11d10f16eaac816ee6b67a7b13f6">Bzip2InputStream</a>
, <a class="el" href="classOpenMS_1_1GzipInputStream.html#a1fdd11d10f16eaac816ee6b67a7b13f6">GzipInputStream</a>
</li>
<li>readChromatogram_()
: <a class="el" href="classOpenMS_1_1CachedmzML.html#ad4ab33d391cc72c4b5e1720588a41958">CachedmzML</a>
</li>
<li>readChromatogramFast()
: <a class="el" href="classOpenMS_1_1CachedmzML.html#a5fe3a9e1e476192f7f0e9818cbce3ceb">CachedmzML</a>
</li>
<li>readConsensus()
: <a class="el" href="classOpenMS_1_1SILACAnalyzer.html#ae930eb8197c8961725cdc3aacc6a1c09">SILACAnalyzer</a>
</li>
<li>readConsoleSize_()
: <a class="el" href="classOpenMS_1_1ConsoleUtils.html#af11d7a1c397aba0ead44dd955011a431">ConsoleUtils</a>
</li>
<li>readElementsFromFile_()
: <a class="el" href="classOpenMS_1_1EmpiricalFormula.html#ae7228db8df54723b7f62043078ae9905">EmpiricalFormula</a>
</li>
<li>readFilterConsensusByPattern()
: <a class="el" href="classOpenMS_1_1SILACAnalyzer.html#a1ac17e48c8b64dd12b240bbf41c75501">SILACAnalyzer</a>
</li>
<li>readFromFile()
: <a class="el" href="classOpenMS_1_1PILISModel.html#a99e47a7105ccd2b8def61a21455ddb64">PILISModel</a>
</li>
<li>readFromFile_()
: <a class="el" href="classOpenMS_1_1ElementDB.html#a101296558b6be7b100374793ce4fb54e">ElementDB</a>
</li>
<li>readFromOBOFile()
: <a class="el" href="classOpenMS_1_1ModificationsDB.html#ad61359c1ef928c821fe38733432ad59a">ModificationsDB</a>
</li>
<li>readFromUnimodXMLFile()
: <a class="el" href="classOpenMS_1_1ModificationsDB.html#a8ccca38c63a00dc1199a36081c494823">ModificationsDB</a>
</li>
<li>readMappingFile_()
: <a class="el" href="classOpenMS_1_1OMSSAXMLFile.html#a13163feee9dc1da31901430c58e24b42">OMSSAXMLFile</a>
</li>
<li>readMemdump()
: <a class="el" href="classOpenMS_1_1CachedmzML.html#a78668c2f83b7e9e4fe595c57ab4c642d">CachedmzML</a>
</li>
<li>readNextLine_()
: <a class="el" href="classOpenMS_1_1FuzzyStringComparator.html#a5f5cd0870fe224540df8692d75ded4f3">FuzzyStringComparator</a>
</li>
<li>readOutHeader()
: <a class="el" href="classOpenMS_1_1InspectOutfile.html#ab552b37fdc2ffee6d378504b06474c61">InspectOutfile</a>
, <a class="el" href="classOpenMS_1_1SequestOutfile.html#a0d6a1479fca6fde326052449d22e7990">SequestOutfile</a>
</li>
<li>readProblem()
: <a class="el" href="classOpenMS_1_1LPWrapper.html#a6976c2281fc7224d71e910112798a313">LPWrapper</a>
</li>
<li>readResiduesFromFile_()
: <a class="el" href="classOpenMS_1_1ResidueDB.html#a3480e5079f259789d47d58dc3fb7bfb0">ResidueDB</a>
</li>
<li>readResponseHeader()
: <a class="el" href="classOpenMS_1_1MascotRemoteQuery.html#aaefa5ab57112011b830d3c24edc5a354">MascotRemoteQuery</a>
</li>
<li>readRTMZCharge_()
: <a class="el" href="classOpenMS_1_1PepXMLFile.html#acfc197c87ac22f118934868bf394292e">PepXMLFile</a>
</li>
<li>readSingleSpectrum()
: <a class="el" href="classOpenMS_1_1CachedmzML.html#abf65a29f3396b6baff3cecbd71bb05c8">CachedmzML</a>
</li>
<li>readSpectrum_()
: <a class="el" href="classOpenMS_1_1CachedmzML.html#aeef724ccc70a46b7a027d2f0db112ea0">CachedmzML</a>
</li>
<li>readSpectrumFast()
: <a class="el" href="classOpenMS_1_1CachedmzML.html#afc7807c8e8c717754f5355d4a85e8ea2">CachedmzML</a>
</li>
<li>readTSVInput_()
: <a class="el" href="classOpenMS_1_1TransitionTSVReader.html#aa833c768dfa512c4f73624c0e4393a02">TransitionTSVReader</a>
</li>
<li>readUnstructuredTSVInput_()
: <a class="el" href="classOpenMS_1_1TransitionTSVReader.html#a2454582cdfc6bc2a3dd0c069c0e54320">TransitionTSVReader</a>
</li>
<li>readyReadSlot()
: <a class="el" href="classOpenMS_1_1MascotRemoteQuery.html#a02b58866b2bbcd622b6bb0b941e8c991">MascotRemoteQuery</a>
</li>
<li>reagent_name_
: <a class="el" href="classOpenMS_1_1Modification.html#a59b3681515233e08429369def98268da">Modification</a>
</li>
<li>real_2D_
: <a class="el" href="classOpenMS_1_1TwoDOptimization.html#a5ecbb7085dd05993affbe76a8eae8718">TwoDOptimization</a>
</li>
<li>real_RT_votes_cutoff_
: <a class="el" href="classOpenMS_1_1FeatureFinderAlgorithmIsotopeWavelet.html#ab9444d66ec037a0f90523b6ac87c9087">FeatureFinderAlgorithmIsotopeWavelet< PeakType, FeatureType ></a>
</li>
<li>RealMassDecomposer()
: <a class="el" href="classOpenMS_1_1ims_1_1RealMassDecomposer.html#adfc34416056f2ebfbaeeedaa6aef4469">RealMassDecomposer</a>
</li>
<li>RealType
: <a class="el" href="classOpenMS_1_1Math_1_1AsymmetricStatistics.html#ad524fa52d90fea74b1b3c20cac9317f2">AsymmetricStatistics< Real ></a>
, <a class="el" href="classOpenMS_1_1Math_1_1BasicStatistics.html#a3ebd1e03ef474a8e9aca622ac8d4d09e">BasicStatistics< RealT ></a>
</li>
<li>recalculateAxes()
: <a class="el" href="classOpenMS_1_1SpectrumCanvas.html#a2c00684be652a23f0e07715f58d90744">SpectrumCanvas</a>
</li>
<li>recalculateAxes_()
: <a class="el" href="classOpenMS_1_1Spectrum1DWidget.html#a65923d02ce239dc193e9ce4d841625ae">Spectrum1DWidget</a>
, <a class="el" href="classOpenMS_1_1Spectrum2DWidget.html#a65923d02ce239dc193e9ce4d841625ae">Spectrum2DWidget</a>
, <a class="el" href="classOpenMS_1_1Spectrum3DWidget.html#a65923d02ce239dc193e9ce4d841625ae">Spectrum3DWidget</a>
, <a class="el" href="classOpenMS_1_1SpectrumWidget.html#ae5e32efa584e5efba41584397fdb8f5b">SpectrumWidget</a>
</li>
<li>recalculateCurrentLayerDotGradient()
: <a class="el" href="classOpenMS_1_1Spectrum2DCanvas.html#a445d3ca727f573ba10200babb5d1715a">Spectrum2DCanvas</a>
</li>
<li>recalculateDotGradient_()
: <a class="el" href="classOpenMS_1_1Spectrum2DCanvas.html#a8d61c9c119bdbfb556338a4cdff07533">Spectrum2DCanvas</a>
, <a class="el" href="classOpenMS_1_1Spectrum3DOpenGLCanvas.html#a8d61c9c119bdbfb556338a4cdff07533">Spectrum3DOpenGLCanvas</a>
</li>
<li>recalculateRanges_()
: <a class="el" href="classOpenMS_1_1SpectrumCanvas.html#a564e104c9465bd74bbfe94acff76d3a9">SpectrumCanvas</a>
</li>
<li>recalculateSnapFactor_()
: <a class="el" href="classOpenMS_1_1Spectrum1DCanvas.html#aed3e8884b524432252a4d7d94b215155">Spectrum1DCanvas</a>
, <a class="el" href="classOpenMS_1_1Spectrum2DCanvas.html#aed3e8884b524432252a4d7d94b215155">Spectrum2DCanvas</a>
, <a class="el" href="classOpenMS_1_1SpectrumCanvas.html#aed3e8884b524432252a4d7d94b215155">SpectrumCanvas</a>
</li>
<li>recent_actions_
: <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a28ea0ef456a6aed8205de4628b9e162d">TOPPViewBase</a>
</li>
<li>recent_files_
: <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a2d213378ad7f5fb2aa6e5c7e00c6542f">TOPPViewBase</a>
</li>
<li>recomputeConsensus_()
: <a class="el" href="classOpenMS_1_1BaseLabeler.html#ad50a70450d9c1a0f822a34250057f385">BaseLabeler</a>
</li>
<li>reconstructChannelInfo_()
: <a class="el" href="classOpenMS_1_1ItraqQuantifier.html#acf4b9c1ca1c798bb0cddaa9f7c1ec13e">ItraqQuantifier</a>
</li>
<li>record_length_
: <a class="el" href="classOpenMS_1_1InspectOutfile.html#a22406b9e4a43d545c303bdf1b8ff593e">InspectOutfile</a>
</li>
<li>recursion_depth_
: <a class="el" href="classOpenMS_1_1ProgressLogger.html#a94eb3ef5ef94b83eb348dd00a2b53119">ProgressLogger</a>
</li>
<li>reduce()
: <a class="el" href="classOpenMS_1_1DistanceMatrix.html#af6fedd1ccc4ae7f2cfe568990afbf526">DistanceMatrix< Value ></a>
</li>
<li>reduce_by_factor_
: <a class="el" href="classOpenMS_1_1ParentPeakMower.html#a3174483bf9e8b72dd756ac6ccd837aa9">ParentPeakMower</a>
</li>
<li>reducePermuts_()
: <a class="el" href="classOpenMS_1_1CompNovoIdentification.html#a7c8fe8f058261f294a5220f03e1300db">CompNovoIdentification</a>
, <a class="el" href="classOpenMS_1_1CompNovoIdentificationCID.html#ac535ff286fb4919a4a1a5822ac39c742">CompNovoIdentificationCID</a>
</li>
<li>reestimate_mt_sd_
: <a class="el" href="classOpenMS_1_1MassTraceDetection.html#ad0503b35c5440d9f490b0a47a176bdcd">MassTraceDetection</a>
</li>
<li>ref
: <a class="el" href="classOpenMS_1_1HierarchicalClustering_1_1TreeNode.html#a0e6ef4580b37ac6b010bef4cbc9b72d3">HierarchicalClustering< PointRef >::TreeNode</a>
</li>
<li>ref_
: <a class="el" href="structOpenMS_1_1PrecisionWrapper.html#a99c5de27ecd7952a2587fe6d069d515c">PrecisionWrapper< FloatingPointType ></a>
</li>
<li>ref_intens
: <a class="el" href="structOpenMS_1_1IsotopeWaveletTransform_1_1BoxElement.html#a62e26b2bd8e4c4038f96c14cae131978">IsotopeWaveletTransform< PeakType >::BoxElement</a>
</li>
<li>ref_map_id_
: <a class="el" href="classOpenMS_1_1IsobaricNormalizer.html#a899ad5d48301da6b0dcc4be09d5cf21e">IsobaricNormalizer</a>
</li>
<li>ref_param_
: <a class="el" href="classOpenMS_1_1Internal_1_1MzMLHandler.html#a5a4f408867d428d90605cbfdf5b4a507">MzMLHandler< MapType ></a>
</li>
<li>Reference
: <a class="el" href="classOpenMS_1_1Matrix.html#a54e1e41d0271084424540ff4482caa58">Matrix< Value ></a>
, <a class="el" href="classOpenMS_1_1FeatureMap.html#aa658710632c61cf91f5758f42c9ec39e">FeatureMap< FeatureT ></a>
</li>
<li>reference
: <a class="el" href="classOpenMS_1_1AASequence_1_1ConstIterator.html#ab696bc0360b09bcdbf6262da24cb67be">AASequence::ConstIterator</a>
, <a class="el" href="classOpenMS_1_1AASequence_1_1Iterator.html#ab696bc0360b09bcdbf6262da24cb67be">AASequence::Iterator</a>
, <a class="el" href="classOpenMS_1_1ConstRefVector_1_1ConstRefVectorConstIterator.html#aac736176f33ad72afc6ab405b1bf9ecc">ConstRefVector< ContainerT >::ConstRefVectorConstIterator< ValueT ></a>
, <a class="el" href="classOpenMS_1_1ConstRefVector_1_1ConstRefVectorIterator.html#af2088dd836cd22918d53466b29c8b1eb">ConstRefVector< ContainerT >::ConstRefVectorIterator< ValueT ></a>
, <a class="el" href="classOpenMS_1_1ConstRefVector.html#a30c621ec7e971dfe717f39bcb49eaf3e">ConstRefVector< ContainerT ></a>
, <a class="el" href="classOpenMS_1_1DPosition.html#a5c226ff98bb310140a71fd59913d1b29">DPosition< D, TCoordinateType ></a>
, <a class="el" href="classOpenMS_1_1Matrix.html#abaed3f9c23f38a6baedf841296fa931c">Matrix< Value ></a>
, <a class="el" href="classOpenMS_1_1SparseVector.html#aa2f93eeaee3e4094906a8d5f3895608a">SparseVector< Value ></a>
, <a class="el" href="classOpenMS_1_1Internal_1_1IntensityIteratorWrapper.html#aeb309236f9ee8081ba6370f2b84760f9">IntensityIteratorWrapper< IteratorT ></a>
, <a class="el" href="classOpenMS_1_1Internal_1_1AreaIterator.html#ab454be3e4a0684f57fb6acb877efa01f">AreaIterator< ValueT, ReferenceT, PointerT, SpectrumIteratorT, PeakIteratorT ></a>
</li>
<li>reference_
: <a class="el" href="classOpenMS_1_1MapAlignmentAlgorithmIdentification.html#a8c30e6cfc94357ef436d616a87e68ae0">MapAlignmentAlgorithmIdentification</a>
, <a class="el" href="classOpenMS_1_1MapAlignmentAlgorithmPoseClustering.html#a0a180d56906b4980aa2719fc500cd2de">MapAlignmentAlgorithmPoseClustering</a>
, <a class="el" href="classOpenMS_1_1IsotopeWaveletTransform_1_1TransSpectrum.html#af0266aa100043c3b03d6b1fce8f567a3">IsotopeWaveletTransform< PeakType >::TransSpectrum</a>
</li>
<li>reference_channel_
: <a class="el" href="classOpenMS_1_1ItraqEightPlexQuantitationMethod.html#a2f83ab7ec20f11592f41f7baa27f0e0c">ItraqEightPlexQuantitationMethod</a>
, <a class="el" href="classOpenMS_1_1ItraqFourPlexQuantitationMethod.html#a2f83ab7ec20f11592f41f7baa27f0e0c">ItraqFourPlexQuantitationMethod</a>
, <a class="el" href="classOpenMS_1_1TMTSixPlexQuantitationMethod.html#a2f83ab7ec20f11592f41f7baa27f0e0c">TMTSixPlexQuantitationMethod</a>
</li>
<li>reference_channel_name_
: <a class="el" href="classOpenMS_1_1IsobaricNormalizer.html#a9bfdeef5c9747d8394796dc0fdefe618">IsobaricNormalizer</a>
</li>
<li>reference_index_
: <a class="el" href="classOpenMS_1_1MapAlignmentAlgorithmIdentification.html#a6ccd066fbeac50700c0e5312064acec1">MapAlignmentAlgorithmIdentification</a>
</li>
<li>refine_
: <a class="el" href="classOpenMS_1_1XTandemInfile.html#a8a9945a699a378359b462bab6535842b">XTandemInfile</a>
</li>
<li>refine_max_valid_evalue_
: <a class="el" href="classOpenMS_1_1XTandemInfile.html#a48b3fbd29cb3c6c27c34beb3c167611e">XTandemInfile</a>
</li>
<li>REFLECTRON
: <a class="el" href="classOpenMS_1_1Instrument.html#ad37f94415197fe6b7ab39e705877825ea00c6731b4cbe1c7f48610afb10686c9c">Instrument</a>
</li>
<li>reflectron_state_
: <a class="el" href="classOpenMS_1_1MassAnalyzer.html#a177c6d1d70c318e0cd2cafd67ef45cda">MassAnalyzer</a>
, <a class="el" href="classOpenMS_1_1MassAnalyzerVisualizer.html#af7018a57c821d8d92e7e2de186cc1dea">MassAnalyzerVisualizer</a>
</li>
<li>ReflectronState
: <a class="el" href="classOpenMS_1_1MassAnalyzer.html#a4f15a2dc6638a7bdbcc97cab181bd52f">MassAnalyzer</a>
</li>
<li>REFLSTATENULL
: <a class="el" href="classOpenMS_1_1MassAnalyzer.html#a4f15a2dc6638a7bdbcc97cab181bd52fa1f4903fcad0a7b9716ebd68b4d6959e4">MassAnalyzer</a>
</li>
<li>refreshModificationList()
: <a class="el" href="classOpenMS_1_1ModifierRep.html#a4116322e6cba135c6bb4f48a3f5177f7">ModifierRep</a>
</li>
<li>refreshParameters()
: <a class="el" href="classOpenMS_1_1TOPPASBase.html#a18a56e69770627550c587e6437d3f6a3">TOPPASBase</a>
, <a class="el" href="classOpenMS_1_1TOPPASScene.html#aa95480467440842c0fb80c8e325aa0d8">TOPPASScene</a>
, <a class="el" href="classOpenMS_1_1TOPPASToolVertex.html#abcd7b0164456f346950894f13f482a07">TOPPASToolVertex</a>
</li>
<li>refreshPipelineParameters()
: <a class="el" href="classOpenMS_1_1TOPPASBase.html#abc580cb500d458ddef9308feca871326">TOPPASBase</a>
</li>
<li>RefreshStatus
: <a class="el" href="classOpenMS_1_1TOPPASScene.html#a0963847e7748fbbad3036d73a5d219cd">TOPPASScene</a>
</li>
<li>reg_models
: <a class="el" href="structOpenMS_1_1SvmTheoreticalSpectrumGenerator_1_1SvmModelParameterSet.html#a4b96023be9755df936a0c1cf232ab90f">SvmTheoreticalSpectrumGenerator::SvmModelParameterSet</a>
</li>
<li>region_
: <a class="el" href="classOpenMS_1_1SimpleExtender.html#a2a565aa56d3937ea9ceefca1780ace7d">SimpleExtender< PeakType, FeatureType ></a>
</li>
<li>region_rt_span_
: <a class="el" href="classOpenMS_1_1EGHTraceFitter.html#aa4be140bb570cdd9138623c355d5d5f2">EGHTraceFitter< PeakType ></a>
, <a class="el" href="classOpenMS_1_1GaussTraceFitter.html#aa4be140bb570cdd9138623c355d5d5f2">GaussTraceFitter< PeakType ></a>
</li>
<li>registerAt()
: <a class="el" href="classOpenMS_1_1Logger_1_1LogStreamNotifier.html#ac4308c8cdf5f66393d11b9f8e55eb983">LogStreamNotifier</a>
</li>
<li>registerChannelsInOutputMap_()
: <a class="el" href="classOpenMS_1_1IsobaricChannelExtractor.html#af8addcc2ec5d214788e65489bb2b7fe1">IsobaricChannelExtractor</a>
</li>
<li>registerChildren()
: <a class="el" href="classOpenMS_1_1BaseGroupFinder.html#a7899dbe105534dc1f81971dd71a26ff0">BaseGroupFinder</a>
, <a class="el" href="classOpenMS_1_1BaseSuperimposer.html#a7899dbe105534dc1f81971dd71a26ff0">BaseSuperimposer</a>
, <a class="el" href="classOpenMS_1_1FeatureGroupingAlgorithm.html#a7899dbe105534dc1f81971dd71a26ff0">FeatureGroupingAlgorithm</a>
, <a class="el" href="classOpenMS_1_1MapAlignmentAlgorithm.html#a7899dbe105534dc1f81971dd71a26ff0">MapAlignmentAlgorithm</a>
, <a class="el" href="classOpenMS_1_1MapAlignmentEvaluationAlgorithm.html#a7899dbe105534dc1f81971dd71a26ff0">MapAlignmentEvaluationAlgorithm</a>
, <a class="el" href="classOpenMS_1_1PepIterator.html#a7899dbe105534dc1f81971dd71a26ff0">PepIterator</a>
, <a class="el" href="classOpenMS_1_1ClusterFunctor.html#a7899dbe105534dc1f81971dd71a26ff0">ClusterFunctor</a>
, <a class="el" href="classOpenMS_1_1BinnedSpectrumCompareFunctor.html#a7899dbe105534dc1f81971dd71a26ff0">BinnedSpectrumCompareFunctor</a>
, <a class="el" href="classOpenMS_1_1PeakSpectrumCompareFunctor.html#a7899dbe105534dc1f81971dd71a26ff0">PeakSpectrumCompareFunctor</a>
, <a class="el" href="classOpenMS_1_1FilterFunctor.html#a7899dbe105534dc1f81971dd71a26ff0">FilterFunctor</a>
, <a class="el" href="classOpenMS_1_1BaseLabeler.html#a0619c54ebc0b33a02eb71f942bb00111">BaseLabeler</a>
, <a class="el" href="classOpenMS_1_1BaseModel.html#a7899dbe105534dc1f81971dd71a26ff0">BaseModel< D ></a>
, <a class="el" href="classOpenMS_1_1FeatureFinderAlgorithm.html#a0619c54ebc0b33a02eb71f942bb00111">FeatureFinderAlgorithm< PeakType, FeatureType ></a>
, <a class="el" href="classOpenMS_1_1Fitter1D.html#a7899dbe105534dc1f81971dd71a26ff0">Fitter1D</a>
, <a class="el" href="classOpenMS_1_1BaseModel.html#ab9b581d943f336f3c723d2d73492e5d6">BaseModel< D ></a>
</li>
<li>registerDoubleList_()
: <a class="el" href="classOpenMS_1_1TOPPBase.html#a59979b92485c117611a056662f8e5b3a">TOPPBase</a>
</li>
<li>registerDoubleOption_()
: <a class="el" href="classOpenMS_1_1TOPPBase.html#aa2d8d3bd5482949c57dd814cff386ca4">TOPPBase</a>
</li>
<li>registered_at_
: <a class="el" href="classOpenMS_1_1Logger_1_1LogStreamNotifier.html#aa6125fdba88c92f6dfc4f415491130f0">LogStreamNotifier</a>
</li>
<li>registeredProducts()
: <a class="el" href="classOpenMS_1_1Factory.html#ab86970d702feb7379f82a3701bd56957">Factory< FactoryProduct ></a>
</li>
<li>registerExperiment()
: <a class="el" href="classOpenMS_1_1MSQuantifications.html#a1f6b9744efc37a4cf38de1435485710a">MSQuantifications</a>
</li>
<li>registerFactory()
: <a class="el" href="classOpenMS_1_1SingletonRegistry.html#ae864a7ec149bbef5733a8dfd3396383e">SingletonRegistry</a>
</li>
<li>registerFlag_()
: <a class="el" href="classOpenMS_1_1TOPPBase.html#a601c44fb542d7beecba59c85a3d7366a">TOPPBase</a>
</li>
<li>registerFullParam_()
: <a class="el" href="classOpenMS_1_1TOPPBase.html#af53bf0f9b3b7f3832e12461e59bc49e3">TOPPBase</a>
</li>
<li>registerInputFile_()
: <a class="el" href="classOpenMS_1_1TOPPBase.html#a210a0761b8809e09b84f66024b0ee591">TOPPBase</a>
</li>
<li>registerInputFileList_()
: <a class="el" href="classOpenMS_1_1TOPPBase.html#aa72f87937c83245e39219a16ae70b58a">TOPPBase</a>
</li>
<li>registerIntList_()
: <a class="el" href="classOpenMS_1_1TOPPBase.html#a3868b16da6290a9ebffacb452caaf9fe">TOPPBase</a>
</li>
<li>registerIntOption_()
: <a class="el" href="classOpenMS_1_1TOPPBase.html#a51fab2e5bbfa80fb2b3f7197b1210d60">TOPPBase</a>
</li>
<li>registerName()
: <a class="el" href="classOpenMS_1_1MetaInfoRegistry.html#a9082d8ac818c60b6d1fba2496d1ae7df">MetaInfoRegistry</a>
</li>
<li>registerOptionsAndFlags_()
: <a class="el" href="classOpenMS_1_1TOPPBase.html#a888a45e3555121aaa36d73032df12a9c">TOPPBase</a>
, <a class="el" href="classTOPPRNPxl.html#a3d074eaf7c38c2e730f3afd97c865350">TOPPRNPxl</a>
</li>
<li>registerOutputFile_()
: <a class="el" href="classOpenMS_1_1TOPPBase.html#aa1c190a70c3e51b88bdd71113f061ad8">TOPPBase</a>
</li>
<li>registerOutputFileList_()
: <a class="el" href="classOpenMS_1_1TOPPBase.html#a55756d2c4466dd29f329abe97783fe0e">TOPPBase</a>
</li>
<li>registerParamSubsectionsAsTOPPSubsections_()
: <a class="el" href="classOpenMS_1_1TOPPBase.html#ac23e82417e25d8621dbd8fd49c32fbb3">TOPPBase</a>
</li>
<li>registerProduct()
: <a class="el" href="classOpenMS_1_1Factory.html#a1e6b975c2cd2181e97ce16f1cc407ea9">Factory< FactoryProduct ></a>
</li>
<li>registerProtein_()
: <a class="el" href="classOpenMS_1_1ProtXMLFile.html#a3f6f63b4e51be5417cd552f09feb36f0">ProtXMLFile</a>
</li>
<li>registerRun()
: <a class="el" href="classOpenMS_1_1QcMLFile.html#a762654f862ef7c6edcee499521cde80f">QcMLFile</a>
</li>
<li>registerSet()
: <a class="el" href="classOpenMS_1_1QcMLFile.html#a0e3fce389619c99e52e7ab0d7e24d13c">QcMLFile</a>
</li>
<li>registerStream()
: <a class="el" href="classOpenMS_1_1StreamHandler.html#a16f63e244de000b661f8646515505045">StreamHandler</a>
</li>
<li>registerStringList_()
: <a class="el" href="classOpenMS_1_1TOPPBase.html#a32f07daff0e43a1118673be3769239f8">TOPPBase</a>
</li>
<li>registerStringOption_()
: <a class="el" href="classOpenMS_1_1TOPPBase.html#aca68ab170c4b79ce48c84a63f4f7c0a0">TOPPBase</a>
</li>
<li>registerSubsection_()
: <a class="el" href="classOpenMS_1_1TOPPBase.html#af1df3cd0dbce060db3787b38f1a0f5d4">TOPPBase</a>
</li>
<li>registerTOPPSubsection_()
: <a class="el" href="classOpenMS_1_1TOPPBase.html#a458a3005edef7474966e6db4b5aba9ef">TOPPBase</a>
</li>
<li>registry()
: <a class="el" href="classOpenMS_1_1MetaInfo.html#abff2063b24c8e80dd783dacaaadbba5b">MetaInfo</a>
</li>
<li>registry_
: <a class="el" href="classOpenMS_1_1MetaInfo.html#ac5710c7c15e26d6715e40dac27f28297">MetaInfo</a>
</li>
<li>reindexed_peptides
: <a class="el" href="structOpenMS_1_1ProteinResolver_1_1ResolverResult.html#a8b52860fe9ebf0f4e256f2d8e5a03363">ProteinResolver::ResolverResult</a>
</li>
<li>reindexed_proteins
: <a class="el" href="structOpenMS_1_1ProteinResolver_1_1ResolverResult.html#a7c70a3c528c8ec1e1a1d496569bc4967">ProteinResolver::ResolverResult</a>
</li>
<li>reindexingNodes_()
: <a class="el" href="classOpenMS_1_1ProteinResolver.html#add53f3c1c6831d16331d2b7b413c59a9">ProteinResolver</a>
</li>
<li>rel_error_
: <a class="el" href="classOpenMS_1_1LevMarqFitter1D.html#ab75e42fa8dcc243c38f9eebbdb760196">LevMarqFitter1D</a>
</li>
<li>rel_prec_error
: <a class="el" href="structRNPxlReportRow.html#a75941fa7994cbf376b85fc38c98baf6f">RNPxlReportRow</a>
</li>
<li>relative_peak_position
: <a class="el" href="structOpenMS_1_1SILACFiltering_1_1BlacklistEntry.html#a677d19787b3d1713412a9da73f159c1a">SILACFiltering::BlacklistEntry</a>
</li>
<li>released()
: <a class="el" href="classOpenMS_1_1TOPPASVertex.html#ae781b95316d4b86524f94753bd57fb28">TOPPASVertex</a>
</li>
<li>relevant
: <a class="el" href="structOpenMS_1_1FeatureDistance_1_1DistanceParams__.html#a398fb09ef444497b2e3506b5b229b187">FeatureDistance::DistanceParams_</a>
</li>
<li>reliability
: <a class="el" href="structOpenMS_1_1MzTabProteinSectionRow.html#aad5da1ffa652c5b8b5a9695cca9ee7b4">MzTabProteinSectionRow</a>
, <a class="el" href="structOpenMS_1_1MzTabPeptideSectionRow.html#aad5da1ffa652c5b8b5a9695cca9ee7b4">MzTabPeptideSectionRow</a>
, <a class="el" href="structOpenMS_1_1MzTabSmallMoleculeSectionRow.html#aad5da1ffa652c5b8b5a9695cca9ee7b4">MzTabSmallMoleculeSectionRow</a>
</li>
<li>remove()
: <a class="el" href="classOpenMS_1_1Logger_1_1LogStream.html#ac18a95fdfb75ebd58b3b4e727bbacfe0">LogStream</a>
, <a class="el" href="classOpenMS_1_1Param.html#abbd4f6287b451e0f2c3f3f9686a5ed26">Param</a>
, <a class="el" href="classOpenMS_1_1String.html#a420fc62062dcc1ffbb3447405cc72462">String</a>
, <a class="el" href="classOpenMS_1_1DataFilters.html#a5922b2712464e6b05cbc51c3a6c12f9d">DataFilters</a>
, <a class="el" href="classOpenMS_1_1File.html#a8d10daf60e64e09561738dbeb25efc82">File</a>
, <a class="el" href="classOpenMS_1_1MultiGradient.html#a82051dbd5cb04c931d72799dde3e44bc">MultiGradient</a>
</li>
<li>remove_()
: <a class="el" href="classOpenMS_1_1MetaInfoVisualizer.html#addfbc93446b47afd2a8f66aed432cca2">MetaInfoVisualizer</a>
</li>
<li>remove_background_peak()
: <a class="el" href="classOpenMS_1_1LCElutionPeak.html#a8c04f05c710a3375baa8c6c40f5ceef3">LCElutionPeak</a>
</li>
<li>remove_chromatogram_flag()
: <a class="el" href="classOpenMS_1_1LayerData.html#a035f9e50aaf2c35bdbe956206286b289">LayerData</a>
</li>
<li>remove_feature()
: <a class="el" href="classOpenMS_1_1LCMS.html#aadded1eebbb250b62595a5bc3497ebb6">LCMS</a>
</li>
<li>remove_feature_by_ID()
: <a class="el" href="classOpenMS_1_1LCMS.html#a9ea92da674893fa7569ba2cdc73903c2">LCMS</a>
</li>
<li>remove_feature_from_list()
: <a class="el" href="classOpenMS_1_1LCMS.html#a0e13e305681f6be0b5f944b348b991b5">LCMS</a>
</li>
<li>remove_low_intensity_quantifications_
: <a class="el" href="classOpenMS_1_1IsobaricChannelExtractor.html#a398f928f66bdb09a53a3c8c46f32891b">IsobaricChannelExtractor</a>
</li>
<li>remove_overlapping_features()
: <a class="el" href="classOpenMS_1_1MRMTransitionGroupPicker.html#a5ce5987c655ea5a3bba8d24d7833d323">MRMTransitionGroupPicker</a>
</li>
<li>remove_precursor_near_peaks_
: <a class="el" href="classOpenMS_1_1SequestInfile.html#a7abc7a6d8eeb5c868685d40e53575b9b">SequestInfile</a>
</li>
<li>remove_raw_spec_name()
: <a class="el" href="classOpenMS_1_1LCMS.html#a0594367083652d030fc378ca10e3f759">LCMS</a>
</li>
<li>removeAdduct()
: <a class="el" href="classOpenMS_1_1Compomer.html#a87b558ad1d658b47bd49127df60957a8">Compomer</a>
</li>
<li>removeAll()
: <a class="el" href="classOpenMS_1_1Param.html#a98469c9200a2bd7a6cfdb73ddea1ff9c">Param</a>
, <a class="el" href="classOpenMS_1_1TOPPASInputFilesDialog.html#a9b0a5a3ad9972ab0e8eb0b54873aac6b">TOPPASInputFilesDialog</a>
</li>
<li>removeAllAttachments()
: <a class="el" href="classOpenMS_1_1QcMLFile.html#a101108eff764d53349569ec2e4c0ffee">QcMLFile</a>
</li>
<li>removeAllMS2Information()
: <a class="el" href="classOpenMS_1_1SHFeature.html#ad8178edd10a25841f5278b468aabe5fb">SHFeature</a>
</li>
<li>removeAttachment()
: <a class="el" href="classOpenMS_1_1QcMLFile.html#afa5c3016c4bff3a1e9e6bcfba184de15">QcMLFile</a>
</li>
<li>removebutton_
: <a class="el" href="classOpenMS_1_1GradientVisualizer.html#af178fe6f8c52a5c4ad6d71eed08ea5c3">GradientVisualizer</a>
</li>
<li>removeCurrentRow()
: <a class="el" href="classOpenMS_1_1Internal_1_1ListTable.html#a4cd1bec49855abb0f4607642755a9e75">ListTable</a>
</li>
<li>removeData_()
: <a class="el" href="classOpenMS_1_1GradientVisualizer.html#af6355459e81c25731440b0e9a6844ef8">GradientVisualizer</a>
</li>
<li>removeDirRecursively()
: <a class="el" href="classOpenMS_1_1File.html#a04f4dd9a03738bcff02e6622848e5d2b">File</a>
</li>
<li>removeExtension()
: <a class="el" href="classOpenMS_1_1File.html#aac1d3f8f0404fefe70e0d84914eb48e9">File</a>
</li>
<li>removeFile()
: <a class="el" href="classOpenMS_1_1FileWatcher.html#a42f5788ff4bcfea476fa3cd45711898d">FileWatcher</a>
</li>
<li>removeHostName_()
: <a class="el" href="classOpenMS_1_1MascotRemoteQuery.html#aed960e5831636e7a1b61baed027eee31">MascotRemoteQuery</a>
</li>
<li>removeId()
: <a class="el" href="classOpenMS_1_1EnhancedTabBar.html#a5d495d68c394676182cd899173d605e4">EnhancedTabBar</a>
, <a class="el" href="classOpenMS_1_1TOPPASTabBar.html#a5d495d68c394676182cd899173d605e4">TOPPASTabBar</a>
</li>
<li>removeInEdge()
: <a class="el" href="classOpenMS_1_1TOPPASVertex.html#a33b4e327efe538cd70a87803e91db0b5">TOPPASVertex</a>
</li>
<li>removeLayer()
: <a class="el" href="classOpenMS_1_1Spectrum1DCanvas.html#a7946648fc7bfac26c7ab37808919470d">Spectrum1DCanvas</a>
, <a class="el" href="classOpenMS_1_1Spectrum2DCanvas.html#a7946648fc7bfac26c7ab37808919470d">Spectrum2DCanvas</a>
, <a class="el" href="classOpenMS_1_1Spectrum3DCanvas.html#a7946648fc7bfac26c7ab37808919470d">Spectrum3DCanvas</a>
, <a class="el" href="classOpenMS_1_1SpectrumCanvas.html#a4d529d5088895469c8017c0d11677ce0">SpectrumCanvas</a>
</li>
<li>removeMetaValue()
: <a class="el" href="classOpenMS_1_1MetaInfoInterface.html#aac68103b8336fa854cf4c59f8bd6cff8">MetaInfoInterface</a>
</li>
<li>removeMS2Feature()
: <a class="el" href="classOpenMS_1_1SHFeature.html#a5176a9e35b8d2512d210f3c713d96ada">SHFeature</a>
</li>
<li>removeNoise()
: <a class="el" href="classOpenMS_1_1CentroidData.html#afea7da5ebbdb52a2004e319aa7aecdec">CentroidData</a>
</li>
<li>removeOutEdge()
: <a class="el" href="classOpenMS_1_1TOPPASVertex.html#a1657167d6b27ec866ae110436aba21c4">TOPPASVertex</a>
</li>
<li>removeOutlierFragments()
: <a class="el" href="classOpenMS_1_1ClusteredMS2ConsensusSpectrum.html#a449fa950645c4ea3d3750194e2df2002">ClusteredMS2ConsensusSpectrum</a>
</li>
<li>removeQualityParameter()
: <a class="el" href="classOpenMS_1_1QcMLFile.html#afb35854c48d1e5e9642c28c1c2a2ae68">QcMLFile</a>
</li>
<li>removeRowButton_
: <a class="el" href="classOpenMS_1_1ListEditor.html#a4e80be0e4ae5504b885566c6f14f2f08">ListEditor</a>
</li>
<li>removeSelected()
: <a class="el" href="classOpenMS_1_1TOPPASInputFilesDialog.html#afa0f08a35be965c8271b2d4e3b734c9c">TOPPASInputFilesDialog</a>
, <a class="el" href="classOpenMS_1_1TOPPASScene.html#afa0f08a35be965c8271b2d4e3b734c9c">TOPPASScene</a>
</li>
<li>removeSelectedItems()
: <a class="el" href="classOpenMS_1_1Annotations1DContainer.html#aaaf307a1fce8aba8a0ad613e2ef1a0ed">Annotations1DContainer</a>
</li>
<li>removeSmall_()
: <a class="el" href="classOpenMS_1_1SILACClustering.html#a917fc2e36dcbb45d05b9324b536cd544">SILACClustering</a>
</li>
<li>removeTemporaryAnnotations_()
: <a class="el" href="classOpenMS_1_1TOPPViewIdentificationViewBehavior.html#a6715ad5df2d86c4287f8608be9a02f86">TOPPViewIdentificationViewBehavior</a>
</li>
<li>removeTheoreticalSpectrumLayer_()
: <a class="el" href="classOpenMS_1_1TOPPViewIdentificationViewBehavior.html#a2202560d41bc3ce8d51b52d5b6fb969d">TOPPViewIdentificationViewBehavior</a>
</li>
<li>removeTreatment()
: <a class="el" href="classOpenMS_1_1Sample.html#a8c861bf38e5f4bdfe0c8509a7314e556">Sample</a>
</li>
<li>removeUnreferencedProteinHits()
: <a class="el" href="classOpenMS_1_1IDFilter.html#a68deb9dc6b9871829bb7f27fdd847606">IDFilter</a>
</li>
<li>removeValue()
: <a class="el" href="classOpenMS_1_1MetaInfo.html#a20d82e3b0e195eea8583bf6e148f62f6">MetaInfo</a>
</li>
<li>removeWhitespaces()
: <a class="el" href="classOpenMS_1_1String.html#a5e03c74ba9d6e02a968cffb57b1c990a">String</a>
</li>
<li>removeZeroedElements_()
: <a class="el" href="classOpenMS_1_1EmpiricalFormula.html#a75dcbb4fc7fc634c571ce8ea75870479">EmpiricalFormula</a>
</li>
<li>REMPI
: <a class="el" href="classOpenMS_1_1IonSource.html#aa1f350d16338b42e2384db2e5aa4a3f4aae01bfe30f377fbd7d8e5f4e431eaacb">IonSource</a>
</li>
<li>renameOutput_()
: <a class="el" href="classOpenMS_1_1TOPPASToolVertex.html#a17d057a6f2bd40214c6ab8ebdbd0c9a0">TOPPASToolVertex</a>
</li>
<li>rend()
: <a class="el" href="classOpenMS_1_1ConstRefVector.html#aa026737f97139d5d84709964c8a589da">ConstRefVector< ContainerT ></a>
, <a class="el" href="classOpenMS_1_1SparseVector.html#a68c599ddcbfddc65170de524ac165e44">SparseVector< Value ></a>
, <a class="el" href="classOpenMS_1_1ConsensusFeature.html#ab3c414470d5cea2986cfab7a90146cb6">ConsensusFeature</a>
, <a class="el" href="classOpenMS_1_1MassTrace.html#a68c599ddcbfddc65170de524ac165e44">MassTrace</a>
</li>
<li>render()
: <a class="el" href="classOpenMS_1_1DBConnection.html#a827319a500781a5d33d04454b644a60b">DBConnection</a>
</li>
<li>renderForImage()
: <a class="el" href="classOpenMS_1_1Spectrum1DWidget.html#ac94cf152a3f5cdc74b1d0bd29c758b03">Spectrum1DWidget</a>
</li>
<li>renormalize()
: <a class="el" href="classOpenMS_1_1IsotopeDistribution.html#ad48fc825a3569a9f0f4c789b47a757ff">IsotopeDistribution</a>
</li>
<li>replace()
: <a class="el" href="classOpenMS_1_1DataFilters.html#a55bd33874fcb6a499ae94a7c3ca66186">DataFilters</a>
</li>
<li>replaceCVTerm()
: <a class="el" href="classOpenMS_1_1CVTermList.html#a5b891abd27d28e679816c3d5b548021b">CVTermList</a>
</li>
<li>replaceCVTerms()
: <a class="el" href="structOpenMS_1_1TargetedExperimentHelper_1_1TraMLProduct.html#a801719fb539d7e84a7435dc2dcffc2e2">TraMLProduct</a>
, <a class="el" href="classOpenMS_1_1CVTermList.html#ac77cb5abfefbe985e0c716afecfde617">CVTermList</a>
</li>
<li>replacement_
: <a class="el" href="classOpenMS_1_1SVOutStream.html#aa96e11faca88d3ed0acf9921422caa77">SVOutStream</a>
</li>
<li>report_summed_ints_
: <a class="el" href="classOpenMS_1_1FeatureFindingMetabo.html#a558876928760200a0b0b062fd4c345bd">FeatureFindingMetabo</a>
</li>
<li>reported_mz_
: <a class="el" href="classOpenMS_1_1FeatureFinderAlgorithmPicked.html#ae464adecb765a4c2b9c35b374620454e">FeatureFinderAlgorithmPicked< PeakType, FeatureType ></a>
</li>
<li>reporter_mass_shift_
: <a class="el" href="classOpenMS_1_1IsobaricChannelExtractor.html#a2790d6522e56f22cff5ce7e9f15ba622">IsobaricChannelExtractor</a>
</li>
<li>reportFailure_()
: <a class="el" href="classOpenMS_1_1FuzzyStringComparator.html#a94b21e5e820e1eef2b100f8a6c939dd6">FuzzyStringComparator</a>
</li>
<li>reportSuccess_()
: <a class="el" href="classOpenMS_1_1FuzzyStringComparator.html#aee9a93b625d450f57192e1dbcb634775">FuzzyStringComparator</a>
</li>
<li>requestClipboardContent()
: <a class="el" href="classOpenMS_1_1TOPPASScene.html#abf0e74b1bc0b13abeec9ba96d31eb85e">TOPPASScene</a>
</li>
<li>requestVisibleArea1D()
: <a class="el" href="classOpenMS_1_1SpectraIdentificationViewWidget.html#a0ec193e6ac164d0bc1b139c90c4673cb">SpectraIdentificationViewWidget</a>
</li>
<li>require_args_
: <a class="el" href="classOpenMS_1_1TOPPBase.html#a4455a77e7412b4bf41dbd085484196c8">TOPPBase</a>
</li>
<li>required
: <a class="el" href="structOpenMS_1_1ParameterInformation.html#a89ebe0265f74c9919a622df7dccbfe5c">ParameterInformation</a>
</li>
<li>RequiredParameterNotGiven()
: <a class="el" href="classOpenMS_1_1Exception_1_1RequiredParameterNotGiven.html#a8c76c0508ca070f4abf0f13a7aa34f59">RequiredParameterNotGiven</a>
</li>
<li>requirement_level_
: <a class="el" href="classOpenMS_1_1CVMappingRule.html#ae92e11ad68321a8d263a7bf083e31cb0">CVMappingRule</a>
</li>
<li>RequirementLevel
: <a class="el" href="classOpenMS_1_1CVMappingRule.html#a23b4ce2a86a472a0c9000f7e9ee36b48">CVMappingRule</a>
</li>
<li>requires_login_
: <a class="el" href="classOpenMS_1_1MascotRemoteQuery.html#adb87e15808abc5db5f3c13bcb186a255">MascotRemoteQuery</a>
</li>
<li>rerunTOPPTool()
: <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a8eeb0a7d1e13951ed4ab96dbc3942f76">TOPPViewBase</a>
</li>
<li>res_
: <a class="el" href="classOpenMS_1_1IonDetectorVisualizer.html#a81db0a60c80ab311b6c428eeb1b83d88">IonDetectorVisualizer</a>
, <a class="el" href="classOpenMS_1_1MassAnalyzerVisualizer.html#a81db0a60c80ab311b6c428eeb1b83d88">MassAnalyzerVisualizer</a>
</li>
<li>res_base_
: <a class="el" href="classOpenMS_1_1RawMSSignalSimulation.html#adbfbec82b64e1711adf583d967462c6a">RawMSSignalSimulation</a>
</li>
<li>RES_CONSTANT
: <a class="el" href="classOpenMS_1_1RawMSSignalSimulation.html#ad2e04a1a86912fd63b00661e2348d3b1ab578920fa0bc05e9decd5952d94c3385">RawMSSignalSimulation</a>
</li>
<li>RES_LINEAR
: <a class="el" href="classOpenMS_1_1RawMSSignalSimulation.html#ad2e04a1a86912fd63b00661e2348d3b1a10d18d53cdd2c7a96a6c7bc4830fa59b">RawMSSignalSimulation</a>
</li>
<li>res_method_
: <a class="el" href="classOpenMS_1_1MassAnalyzerVisualizer.html#a71f80f55d2f4d635b7747ce336bd15c0">MassAnalyzerVisualizer</a>
</li>
<li>res_model_
: <a class="el" href="classOpenMS_1_1RawMSSignalSimulation.html#a3f60891f90436d076f7219221ff2b963">RawMSSignalSimulation</a>
</li>
<li>RES_SQRT
: <a class="el" href="classOpenMS_1_1RawMSSignalSimulation.html#ad2e04a1a86912fd63b00661e2348d3b1adf61a4cf87044581b77d97e85428ce9c">RawMSSignalSimulation</a>
</li>
<li>res_type_
: <a class="el" href="classOpenMS_1_1MassAnalyzerVisualizer.html#a567bf3d9a9c8e895d3107df42cd55491">MassAnalyzerVisualizer</a>
</li>
<li>resample()
: <a class="el" href="classOpenMS_1_1ConsensusMapNormalizerAlgorithmQuantile.html#a04a3dd5969c4b6e7283f3ff15aa507b6">ConsensusMapNormalizerAlgorithmQuantile</a>
</li>
<li>resampleChromatogram_()
: <a class="el" href="classOpenMS_1_1MRMTransitionGroupPicker.html#ac8e7c04f7fed4ad2ba53408e9b5cca76">MRMTransitionGroupPicker</a>
</li>
<li>rescore()
: <a class="el" href="classOpenMS_1_1PrecursorIonSelection.html#aea9e9fe1f13d14873c765ddec8f38150">PrecursorIonSelection</a>
</li>
<li>rescore_()
: <a class="el" href="classOpenMS_1_1PrecursorIonSelection.html#a75c7dfe3f9c66bb88cddfa8114f4bf3a">PrecursorIonSelection</a>
</li>
<li>reserve()
: <a class="el" href="classOpenMS_1_1MSExperiment.html#af5e67d26823ec12e91434f4e74faa9d1">MSExperiment< PeakT, ChromatogramPeakT ></a>
, <a class="el" href="classOpenMS_1_1ConstRefVector.html#a562f7b24b47d3e7632a9896935c14d8b">ConstRefVector< ContainerT ></a>
</li>
<li>reserveSpaceChromatograms()
: <a class="el" href="classOpenMS_1_1MSExperiment.html#a4de1763c39f89f224521ec0d7a804589">MSExperiment< PeakT, ChromatogramPeakT ></a>
</li>
<li>reserveSpaceSpectra()
: <a class="el" href="classOpenMS_1_1MSExperiment.html#ad9c7f3105519d825fa5f0ec8c9b94148">MSExperiment< PeakT, ChromatogramPeakT ></a>
</li>
<li>RESERVOIR
: <a class="el" href="classOpenMS_1_1IonSource.html#a08b8f804d8602840858ce2d533db675fa73dded3a91104b5de02f9f408023ef18">IonSource</a>
</li>
<li>reset()
: <a class="el" href="classOpenMS_1_1TOPPASToolVertex.html#a2b6a889debb0d65772d72ac866928828">TOPPASToolVertex</a>
, <a class="el" href="classOpenMS_1_1MSExperiment.html#ad20897c5c8bd47f5d4005989bead0e55">MSExperiment< PeakT, ChromatogramPeakT ></a>
, <a class="el" href="structOpenMS_1_1IsobaricQuantifierStatistics.html#ad20897c5c8bd47f5d4005989bead0e55">IsobaricQuantifierStatistics</a>
, <a class="el" href="classOpenMS_1_1PrecursorIonSelection.html#ad20897c5c8bd47f5d4005989bead0e55">PrecursorIonSelection</a>
, <a class="el" href="structOpenMS_1_1FuzzyStringComparator_1_1StreamElement__.html#ad20897c5c8bd47f5d4005989bead0e55">FuzzyStringComparator::StreamElement_</a>
, <a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html#ad20897c5c8bd47f5d4005989bead0e55">XMLHandler</a>
, <a class="el" href="classOpenMS_1_1Math_1_1Histogram.html#ac6262908ae6d3547148e77f84bba59f9">Histogram< ValueType, BinSizeType ></a>
, <a class="el" href="classOpenMS_1_1StopWatch.html#ad20897c5c8bd47f5d4005989bead0e55">StopWatch</a>
, <a class="el" href="classOpenMS_1_1TOPPASOutputFileListVertex.html#a2b6a889debb0d65772d72ac866928828">TOPPASOutputFileListVertex</a>
, <a class="el" href="classOpenMS_1_1TOPPASVertex.html#a2b6a889debb0d65772d72ac866928828">TOPPASVertex</a>
</li>
<li>resetAlignment()
: <a class="el" href="classOpenMS_1_1Spectrum1DCanvas.html#afc07e0ab8accea3f55c5b4a90416166f">Spectrum1DCanvas</a>
, <a class="el" href="classOpenMS_1_1Spectrum1DWidget.html#afc07e0ab8accea3f55c5b4a90416166f">Spectrum1DWidget</a>
</li>
<li>resetDownstream()
: <a class="el" href="classOpenMS_1_1TOPPASScene.html#abb3a28ddd092c691e58c3173217a5333">TOPPASScene</a>
</li>
<li>resetErrors()
: <a class="el" href="classOpenMS_1_1XMLValidator.html#a3f3f37686a2d32fbf405a7ab3073e2ae">XMLValidator</a>
</li>
<li>resetMembers_()
: <a class="el" href="classOpenMS_1_1FeatureXMLFile.html#afc80fa73209939cb2f1a2df34301c0a3">FeatureXMLFile</a>
, <a class="el" href="classOpenMS_1_1ProtXMLFile.html#afc80fa73209939cb2f1a2df34301c0a3">ProtXMLFile</a>
</li>
<li>resetPeakGroupIter()
: <a class="el" href="classOpenMS_1_1CentroidData.html#a99af3c20188aba3c421e0c894b7f41d3">CentroidData</a>
</li>
<li>resetProcessesQueue()
: <a class="el" href="classOpenMS_1_1TOPPASScene.html#aa5d3492603fcb91d79e2b5059588ab96">TOPPASScene</a>
</li>
<li>resetTranslation()
: <a class="el" href="classOpenMS_1_1Spectrum3DOpenGLCanvas.html#af98e43a9c11c7ca96343f67a6171de55">Spectrum3DOpenGLCanvas</a>
</li>
<li>resetZoom()
: <a class="el" href="classOpenMS_1_1TOPPViewBase.html#aef3fe1657d765ebb8005ededdbd3aca5">TOPPViewBase</a>
, <a class="el" href="classOpenMS_1_1IDEvaluationBase.html#aef3fe1657d765ebb8005ededdbd3aca5">IDEvaluationBase</a>
, <a class="el" href="classOpenMS_1_1SpectrumCanvas.html#a5faf62c3fc9b6d875955a519db4ddb8c">SpectrumCanvas</a>
</li>
<li>residual2D_()
: <a class="el" href="classOpenMS_1_1TwoDOptimization.html#aa82b642dc0b200f292a5f44e6458bf16">TwoDOptimization</a>
</li>
<li>residual_()
: <a class="el" href="classOpenMS_1_1LmaIsotopeFitter1D.html#a55ce7167aaa20aa7c072a25d774b6e40">LmaIsotopeFitter1D</a>
, <a class="el" href="classOpenMS_1_1EGHTraceFitter.html#a27af5678c8951895a47f28421bbfbbdf">EGHTraceFitter< PeakType ></a>
, <a class="el" href="classOpenMS_1_1EGHFitter1D.html#a55ce7167aaa20aa7c072a25d774b6e40">EGHFitter1D</a>
, <a class="el" href="classOpenMS_1_1EmgFitter1D.html#a55ce7167aaa20aa7c072a25d774b6e40">EmgFitter1D</a>
, <a class="el" href="classOpenMS_1_1GaussTraceFitter.html#a27af5678c8951895a47f28421bbfbbdf">GaussTraceFitter< PeakType ></a>
, <a class="el" href="classOpenMS_1_1LmaGaussFitter1D.html#a55ce7167aaa20aa7c072a25d774b6e40">LmaGaussFitter1D</a>
</li>
<li>Residue()
: <a class="el" href="classOpenMS_1_1Residue.html#a2c020cf1aebff14954e47d6c4d3adb1c">Residue</a>
</li>
<li>residue
: <a class="el" href="structOpenMS_1_1SvmTheoreticalSpectrumGenerator_1_1IonType.html#afec415b55cb87cb4d8db0e8680d0db11">SvmTheoreticalSpectrumGenerator::IonType</a>
</li>
<li>residue_mod_names_
: <a class="el" href="classOpenMS_1_1ResidueDB.html#ade72860b5ee88a20e586ebbd6ed2c5db">ResidueDB</a>
</li>
<li>residue_names_
: <a class="el" href="classOpenMS_1_1ResidueDB.html#a32ad254684818b6c4d6c4aa606f6900e">ResidueDB</a>
</li>
<li>residue_sets_
: <a class="el" href="classOpenMS_1_1ResidueDB.html#ae6f57e172a3d3a9b17e167d195561179">ResidueDB</a>
, <a class="el" href="classOpenMS_1_1Residue.html#ae6f57e172a3d3a9b17e167d195561179">Residue</a>
</li>
<li>residue_to_name_
: <a class="el" href="classOpenMS_1_1CompNovoIdentificationBase.html#ab935c51dfc71c9f00e6bdd21a1932c6f">CompNovoIdentificationBase</a>
</li>
<li>ResidueConstIterator
: <a class="el" href="classOpenMS_1_1ResidueDB.html#aef13d61781ad408131b49271bcab1b0f">ResidueDB</a>
</li>
<li>ResidueDB()
: <a class="el" href="classOpenMS_1_1ResidueDB.html#aff623c0263d058eb0ee0225e000faba7">ResidueDB</a>
</li>
<li>ResidueIterator
: <a class="el" href="classOpenMS_1_1ResidueDB.html#a0c0d4fa2b2758d97c980c9bf6d2e58eb">ResidueDB</a>
</li>
<li>ResidueModification()
: <a class="el" href="classOpenMS_1_1ResidueModification.html#a746247d4262576fdc8b6846271228eab">ResidueModification</a>
</li>
<li>residues_
: <a class="el" href="classOpenMS_1_1ResidueDB.html#adc7ac110999238f38e16e556b1aede95">ResidueDB</a>
</li>
<li>residues_by_set_
: <a class="el" href="classOpenMS_1_1ResidueDB.html#a6d9114ff91d51933c43c531dc88ccd39">ResidueDB</a>
</li>
<li>residues_in_upper_case_
: <a class="el" href="classOpenMS_1_1SequestInfile.html#a57c2fba9aa61eaba9e713013544d45f7">SequestInfile</a>
</li>
<li>residues_table_row_type
: <a class="el" href="classOpenMS_1_1ims_1_1IntegerMassDecomposer.html#a877ef1620102af87a501c88795f032c0">IntegerMassDecomposer< ValueType, DecompositionValueType ></a>
</li>
<li>residues_table_type
: <a class="el" href="classOpenMS_1_1ims_1_1IntegerMassDecomposer.html#a45d9c408bff0b38d460892f7f1bf2d3c">IntegerMassDecomposer< ValueType, DecompositionValueType ></a>
</li>
<li>ResidueType
: <a class="el" href="classOpenMS_1_1Residue.html#a7651af21f9cf8ed6445415903fc6cb48">Residue</a>
</li>
<li>ResidueTypeToString_()
: <a class="el" href="classOpenMS_1_1SvmTheoreticalSpectrumGenerator.html#a16bbdf903607a343a04bfc5cb306b4c9">SvmTheoreticalSpectrumGenerator</a>
</li>
<li>resize()
: <a class="el" href="classOpenMS_1_1ConstRefVector.html#a4e3670a285a3642eaa07f66766cffa72">ConstRefVector< ContainerT ></a>
, <a class="el" href="classOpenMS_1_1DistanceMatrix.html#ae89192ad76ef6362bda69ab08117c3f2">DistanceMatrix< Value ></a>
, <a class="el" href="classOpenMS_1_1Matrix.html#a21b7326fb62d208413d2b63e0b07e68e">Matrix< Value ></a>
, <a class="el" href="classOpenMS_1_1MSExperiment.html#ac2bc824d6ff2633ec34793c9e918d479">MSExperiment< PeakT, ChromatogramPeakT ></a>
, <a class="el" href="classOpenMS_1_1SparseVector.html#acd298d055589cbd2de772a3208128ada">SparseVector< Value ></a>
, <a class="el" href="classOpenMS_1_1ConstRefVector.html#afe254fb143f51eb2d94dd4caeee27e1f">ConstRefVector< ContainerT ></a>
</li>
<li>resizeEvent()
: <a class="el" href="classOpenMS_1_1HistogramWidget.html#aafa66cd3e7e9f8b8302cdfe69a5230f3">HistogramWidget</a>
, <a class="el" href="classOpenMS_1_1Spectrum3DCanvas.html#a187352630b824a4dadd3139b95cf6215">Spectrum3DCanvas</a>
, <a class="el" href="classOpenMS_1_1TOPPASWidget.html#a6fbc07cec19868c41d513b9ef8343e9a">TOPPASWidget</a>
, <a class="el" href="classOpenMS_1_1SpectrumCanvas.html#a187352630b824a4dadd3139b95cf6215">SpectrumCanvas</a>
</li>
<li>resizeGL()
: <a class="el" href="classOpenMS_1_1Spectrum3DOpenGLCanvas.html#a2eca4fded8705575e80cd5a0a1a53ba6">Spectrum3DOpenGLCanvas</a>
</li>
<li>RESMETHNULL
: <a class="el" href="classOpenMS_1_1MassAnalyzer.html#a11053909f1f8edf7b9ccc41c1417ecf6a30f7e6517acdc831053345cdc365bf7b">MassAnalyzer</a>
</li>
<li>resolution_
: <a class="el" href="classOpenMS_1_1IonDetector.html#a9077082049939e6a94a483c2d3417edb">IonDetector</a>
, <a class="el" href="classOpenMS_1_1MassAnalyzer.html#a9077082049939e6a94a483c2d3417edb">MassAnalyzer</a>
</li>
<li>resolution_method_
: <a class="el" href="classOpenMS_1_1MassAnalyzer.html#a4f1058591a86fa3fa9f457d95b2b9ac6">MassAnalyzer</a>
</li>
<li>resolution_type_
: <a class="el" href="classOpenMS_1_1MassAnalyzer.html#ada201cded70d62bef52a0182ca4b330c">MassAnalyzer</a>
</li>
<li>ResolutionMethod
: <a class="el" href="classOpenMS_1_1MassAnalyzer.html#a11053909f1f8edf7b9ccc41c1417ecf6">MassAnalyzer</a>
</li>
<li>RESOLUTIONMODEL
: <a class="el" href="classOpenMS_1_1RawMSSignalSimulation.html#ad2e04a1a86912fd63b00661e2348d3b1">RawMSSignalSimulation</a>
</li>
<li>ResolutionType
: <a class="el" href="classOpenMS_1_1MassAnalyzer.html#a34bdf8df14c74a4beb0f343aa8141e60">MassAnalyzer</a>
</li>
<li>resolveConsensus()
: <a class="el" href="classOpenMS_1_1ProteinResolver.html#a658e675d8755bcb1a7d8fc0d3bd17053">ProteinResolver</a>
</li>
<li>resolveID()
: <a class="el" href="classOpenMS_1_1ProteinResolver.html#a3a001c805248605a0812c7b8511a4a2e">ProteinResolver</a>
</li>
<li>resolver_result_
: <a class="el" href="classOpenMS_1_1ProteinResolver.html#a4c49b96ec457ee2202e74f5ada1e40ff">ProteinResolver</a>
</li>
<li>resolveUniqueIdConflicts()
: <a class="el" href="classOpenMS_1_1UniqueIdIndexer.html#aadeff4d5c98a90c2b080ccc45a563731">UniqueIdIndexer< RandomAccessContainer ></a>
</li>
<li>restoreRotationAndZoom()
: <a class="el" href="classOpenMS_1_1Spectrum3DOpenGLCanvas.html#a9af25a53aa17f9c9836854784e7a81af">Spectrum3DOpenGLCanvas</a>
</li>
<li>restrictions
: <a class="el" href="classOpenMS_1_1Internal_1_1ParamXMLHandler.html#aa78b13fdd78769b027303c137369d5b6">ParamXMLHandler</a>
</li>
<li>restrictions_
: <a class="el" href="classOpenMS_1_1Internal_1_1ListEditorDelegate.html#ac3eaf9b620e3aebad93c6c792059d847">ListEditorDelegate</a>
</li>
<li>restrictions_index
: <a class="el" href="classOpenMS_1_1Internal_1_1ParamXMLHandler.html#a3b1982b56ec29de64c7945de479a8fbd">ParamXMLHandler</a>
</li>
<li>restrictTransitions()
: <a class="el" href="classOpenMS_1_1MRMDecoy.html#a6a06fa868219541393df9ca8c23324bb">MRMDecoy</a>
</li>
<li>RESTYPENULL
: <a class="el" href="classOpenMS_1_1MassAnalyzer.html#a34bdf8df14c74a4beb0f343aa8141e60ac4c87961b9d8b5777f28b612e2363213">MassAnalyzer</a>
</li>
<li>Result()
: <a class="el" href="classOpenMS_1_1PeakWidthEstimator_1_1Result.html#a6f00c89a8bbfd566f848740f9e563604">PeakWidthEstimator::Result</a>
</li>
<li>result_
: <a class="el" href="classOpenMS_1_1DBOpenDialog.html#aa3468c588917608f7e6a69870d0bad77">DBOpenDialog</a>
</li>
<li>result_type
: <a class="el" href="classOpenSwath_1_1mean__and__stddev.html#a32403829e9e5baa60c9fd58375e14842">mean_and_stddev</a>
</li>
<li>resume_source_
: <a class="el" href="classOpenMS_1_1TOPPASScene.html#ae53b40f3518e3b805bfc2c591125f17f">TOPPASScene</a>
</li>
<li>retention_
: <a class="el" href="classOpenMS_1_1EGHFitter1D.html#a7845e32064b46a963bc670a909f5c065">EGHFitter1D</a>
, <a class="el" href="classOpenMS_1_1EmgFitter1D.html#a7845e32064b46a963bc670a909f5c065">EmgFitter1D</a>
, <a class="el" href="classOpenMS_1_1EmgModel.html#a7845e32064b46a963bc670a909f5c065">EmgModel</a>
</li>
<li>retention_time
: <a class="el" href="structOpenMS_1_1MzTabPeptideSectionRow.html#a1b83b8bd7c7be9d42303c040baab5077">MzTabPeptideSectionRow</a>
, <a class="el" href="structOpenMS_1_1MzTabSmallMoleculeSectionRow.html#a1b83b8bd7c7be9d42303c040baab5077">MzTabSmallMoleculeSectionRow</a>
</li>
<li>retention_time_
: <a class="el" href="classOpenMS_1_1MascotInfile.html#af4eca834d1d6d03252647c8261d43bfe">MascotInfile</a>
, <a class="el" href="classOpenMS_1_1MSSpectrum.html#af4eca834d1d6d03252647c8261d43bfe">MSSpectrum< PeakT ></a>
</li>
<li>RetentionTime()
: <a class="el" href="classOpenMS_1_1TargetedExperimentHelper_1_1RetentionTime.html#a68ee66e5ca82ec8ba9c2c85326da91cf">RetentionTime</a>
, <a class="el" href="classOpenMS_1_1TargetedExperiment.html#aecbf6dcfb8bc066ff62e1ef0a7d655bf">TargetedExperiment</a>
, <a class="el" href="classOpenMS_1_1ReactionMonitoringTransition.html#aecbf6dcfb8bc066ff62e1ef0a7d655bf">ReactionMonitoringTransition</a>
, <a class="el" href="classOpenMS_1_1IncludeExcludeTarget.html#aecbf6dcfb8bc066ff62e1ef0a7d655bf">IncludeExcludeTarget</a>
, <a class="el" href="classOpenMS_1_1TargetedExperimentHelper_1_1RetentionTime.html#a6a3cc00b5223e2eb652d65c8e87015cc">RetentionTime</a>
</li>
<li>RETURN_STATUS
: <a class="el" href="classOpenMS_1_1NonNegativeLeastSquaresSolver.html#a9a711ef35904f93af0afed9403c7b20a">NonNegativeLeastSquaresSolver</a>
</li>
<li>reverse()
: <a class="el" href="classOpenMS_1_1String.html#a601bc8dc8ef8b445c7aa99d9c14975fd">String</a>
</li>
<li>reverse_
: <a class="el" href="classOpenMS_1_1IsInIsolationWindowSizeRange.html#aeae704668ea77ad91c0d84485ef7677e">IsInIsolationWindowSizeRange< SpectrumType ></a>
, <a class="el" href="classOpenMS_1_1HasActivationMethod.html#aeae704668ea77ad91c0d84485ef7677e">HasActivationMethod< SpectrumType ></a>
, <a class="el" href="classOpenMS_1_1InMSLevelRange.html#aeae704668ea77ad91c0d84485ef7677e">InMSLevelRange< SpectrumType ></a>
, <a class="el" href="classOpenMS_1_1InRTRange.html#aeae704668ea77ad91c0d84485ef7677e">InRTRange< SpectrumType ></a>
, <a class="el" href="classOpenMS_1_1HasScanMode.html#aeae704668ea77ad91c0d84485ef7677e">HasScanMode< SpectrumType ></a>
, <a class="el" href="classOpenMS_1_1IsZoomSpectrum.html#aeae704668ea77ad91c0d84485ef7677e">IsZoomSpectrum< SpectrumType ></a>
, <a class="el" href="classOpenMS_1_1InMzRange.html#aeae704668ea77ad91c0d84485ef7677e">InMzRange< PeakType ></a>
, <a class="el" href="classOpenMS_1_1InIntensityRange.html#aeae704668ea77ad91c0d84485ef7677e">InIntensityRange< PeakType ></a>
, <a class="el" href="classOpenMS_1_1IsInCollisionEnergyRange.html#aeae704668ea77ad91c0d84485ef7677e">IsInCollisionEnergyRange< SpectrumType ></a>
, <a class="el" href="classOpenMS_1_1HasMetaValue.html#aeae704668ea77ad91c0d84485ef7677e">HasMetaValue< MetaContainer ></a>
, <a class="el" href="classOpenMS_1_1IsEmptySpectrum.html#aeae704668ea77ad91c0d84485ef7677e">IsEmptySpectrum< SpectrumType ></a>
, <a class="el" href="classOpenMS_1_1InPrecursorMZRange.html#aeae704668ea77ad91c0d84485ef7677e">InPrecursorMZRange< SpectrumType ></a>
, <a class="el" href="classOpenMS_1_1HasPrecursorCharge.html#aeae704668ea77ad91c0d84485ef7677e">HasPrecursorCharge< SpectrumType ></a>
</li>
<li>reverse_iterator
: <a class="el" href="classOpenMS_1_1ConsensusFeature.html#a8cf19b3dccf5f9cfa7b6028362c82d5b">ConsensusFeature</a>
, <a class="el" href="classOpenMS_1_1SparseVector.html#a92d3840d66de9e43d49e8ad7dc42c400">SparseVector< Value ></a>
, <a class="el" href="classOpenMS_1_1Matrix.html#a16917878f2694c195d27c8ffe0a31a8b">Matrix< Value ></a>
, <a class="el" href="classOpenMS_1_1ConstRefVector.html#a945c51610edf576f57bc9ff132217beb">ConstRefVector< ContainerT ></a>
, <a class="el" href="classOpenMS_1_1MassTrace.html#a7550dcd04d1ec539eed203b61a78361d">MassTrace</a>
</li>
<li>reverse_map_const_iterator
: <a class="el" href="classOpenMS_1_1SparseVector.html#ab24f65479b1f53514189a36a21f1c167">SparseVector< Value ></a>
</li>
<li>reverse_map_iterator
: <a class="el" href="classOpenMS_1_1SparseVector.html#ae836a466bcf97773d2d54ca7e2583144">SparseVector< Value ></a>
</li>
<li>reverseComparator()
: <a class="el" href="structOpenMS_1_1ReverseComparator.html#a74e80d32be63268d8a46039297e18cc6">ReverseComparator< Cmp ></a>
</li>
<li>ReverseComparator()
: <a class="el" href="structOpenMS_1_1ReverseComparator.html#a21204517c78630430799851bedaa7fba">ReverseComparator< Cmp ></a>
</li>
<li>ReverseIterator
: <a class="el" href="classOpenMS_1_1ConstRefVector.html#a34c32bd205b01731ab7c3e038ae87043">ConstRefVector< ContainerT ></a>
, <a class="el" href="classOpenMS_1_1Map.html#aba21528f2ca3da3a55e0265213b889e7">Map< Key, T ></a>
, <a class="el" href="classOpenMS_1_1MSChromatogram.html#a51a3ad04d9563aaf0db6f849c0b5e52c">MSChromatogram< PeakT ></a>
, <a class="el" href="classOpenMS_1_1MSSpectrum.html#a51a3ad04d9563aaf0db6f849c0b5e52c">MSSpectrum< PeakT ></a>
, <a class="el" href="classOpenMS_1_1StringList.html#a419f3ce215cc5ae6ab8bf596b7dbcd87">StringList</a>
, <a class="el" href="classOpenMS_1_1FeatureMap.html#aba21528f2ca3da3a55e0265213b889e7">FeatureMap< FeatureT ></a>
, <a class="el" href="classOpenMS_1_1String.html#a419f3ce215cc5ae6ab8bf596b7dbcd87">String</a>
, <a class="el" href="classOpenMS_1_1Matrix.html#a419f3ce215cc5ae6ab8bf596b7dbcd87">Matrix< Value ></a>
, <a class="el" href="classOpenMS_1_1SparseVector.html#aa11c452f89b8b225d0ec6722ab303221">SparseVector< Value ></a>
, <a class="el" href="classOpenMS_1_1ConsensusMap.html#abd9dec28283eb419db8e4d531893a901">ConsensusMap</a>
</li>
<li>reversePeptide()
: <a class="el" href="classOpenMS_1_1MRMDecoy.html#a9986d344ee00c124870884f6a476b90d">MRMDecoy</a>
</li>
<li>rhop()
: <a class="el" href="classOpenMS_1_1SparseVector_1_1SparseVectorReverseIterator.html#ae81c24407d452f61ef01bcda9047afa7">SparseVector< Value >::SparseVectorReverseIterator</a>
, <a class="el" href="classOpenMS_1_1SparseVector_1_1SparseVectorConstReverseIterator.html#a27c405b1be5799dbb26bf5688b660069">SparseVector< Value >::SparseVectorConstReverseIterator</a>
</li>
<li>RichPeak1D()
: <a class="el" href="classOpenMS_1_1RichPeak1D.html#ae26784a7591a69da86711c9fdbb6ffb3">RichPeak1D</a>
</li>
<li>RichPeak2D()
: <a class="el" href="classOpenMS_1_1RichPeak2D.html#a0f420357e92ca28d473f62d0e3e6bfc5">RichPeak2D</a>
</li>
<li>RichPeakChromatogram
: <a class="el" href="classOpenMS_1_1MRMFeatureFinderScoring.html#a4910016b262f6723b82c4b1c4d6cdde7">MRMFeatureFinderScoring</a>
, <a class="el" href="classOpenMS_1_1MRMTransitionGroupPicker.html#a4910016b262f6723b82c4b1c4d6cdde7">MRMTransitionGroupPicker</a>
</li>
<li>right
: <a class="el" href="classOpenMS_1_1HierarchicalClustering_1_1TreeDistance.html#ac76cecbc21e446a7a39a3a9f69fd8296">HierarchicalClustering< PointRef >::TreeDistance</a>
</li>
<li>RIGHT
: <a class="el" href="classOpenMS_1_1Compomer.html#aed1a25f4b15c6110f7ac1dc385827049aec8379af7490bb9eaaf579cf17876f38">Compomer</a>
, <a class="el" href="classOpenMS_1_1AxisPainter.html#acdfaca60ec19c0265bac2692d7982726aec8379af7490bb9eaaf579cf17876f38">AxisPainter</a>
</li>
<li>right
: <a class="el" href="classOpenMS_1_1HierarchicalClustering_1_1TreeNode.html#ac76cecbc21e446a7a39a3a9f69fd8296">HierarchicalClustering< PointRef >::TreeNode</a>
, <a class="el" href="structOpenMS_1_1PeakPickerCWT_1_1PeakArea__.html#a4c1fce8761ad1c8a2cec21e1170c9281">PeakPickerCWT::PeakArea_</a>
</li>
<li>right_child
: <a class="el" href="classOpenMS_1_1BinaryTreeNode.html#ad4b004b1a95e77a7f3062df0e1cff1ae">BinaryTreeNode</a>
</li>
<li>right_endpoint_
: <a class="el" href="structOpenMS_1_1PeakShape.html#a8c4f642d031eb6b58645c8664a4a6edc">PeakShape</a>
</li>
<li>right_iterator_set_
: <a class="el" href="structOpenMS_1_1PeakShape.html#ad854a86aa9b4a56b0d270ac1eee81174">PeakShape</a>
</li>
<li>right_splitter_
: <a class="el" href="classOpenMS_1_1HistogramWidget.html#a9fd950a0e0b411a8a88cec15396847df">HistogramWidget</a>
</li>
<li>right_width
: <a class="el" href="structOpenMS_1_1PeakShape.html#aee68061fb00b7a84b354bac91e492039">PeakShape</a>
</li>
<li>rip()
: <a class="el" href="classOpenMS_1_1IDRipper.html#a6bfb26b28df3540b465c7cf985c43f6a">IDRipper</a>
</li>
<li>rm_outliers()
: <a class="el" href="classOpenMS_1_1MRMRTNormalizer.html#a8c2ec4e09bdd94bc5f528f40dc96b01b">MRMRTNormalizer</a>
</li>
<li>RNA
: <a class="el" href="structRNPxlReportRow.html#a8ccbf7da065a5c932c182e8dca0fe6b3">RNPxlReportRow</a>
</li>
<li>RNA_weight
: <a class="el" href="structRNPxlReportRow.html#a77169c55d2e4e0742241c4221a98f542">RNPxlReportRow</a>
</li>
<li>rnd_gen_
: <a class="el" href="classOpenMS_1_1RTSimulation.html#a1755a34bd4d88feb6a87a209273177eb">RTSimulation</a>
, <a class="el" href="classOpenMS_1_1IonizationSimulation.html#a1755a34bd4d88feb6a87a209273177eb">IonizationSimulation</a>
, <a class="el" href="classOpenMS_1_1RawMSSignalSimulation.html#a1755a34bd4d88feb6a87a209273177eb">RawMSSignalSimulation</a>
, <a class="el" href="classOpenMS_1_1RawTandemMSSignalSimulation.html#a1755a34bd4d88feb6a87a209273177eb">RawTandemMSSignalSimulation</a>
</li>
<li>rng_
: <a class="el" href="classOpenMS_1_1BaseLabeler.html#acf6ab009189a770808e644baed4a2c6e">BaseLabeler</a>
</li>
<li>ROCCurve()
: <a class="el" href="classOpenMS_1_1Math_1_1ROCCurve.html#a3331127a6b41a5d8d7410f44dbba0651">ROCCurve</a>
</li>
<li>root_
: <a class="el" href="classOpenMS_1_1Param_1_1ParamIterator.html#a516c3ed4910bf9f3d7a7c055dbe6fc52">Param::ParamIterator</a>
, <a class="el" href="classOpenMS_1_1Param.html#a8387abe1918f6a7aa10a915eded3906a">Param</a>
</li>
<li>round_based_mode_
: <a class="el" href="classOpenMS_1_1TOPPASMergerVertex.html#a7b3297315d2b286c6b73541dbd804259">TOPPASMergerVertex</a>
</li>
<li>round_counter_
: <a class="el" href="classOpenMS_1_1TOPPASVertex.html#a5ef4802a55dfe5d9b61e9510b32f79d6">TOPPASVertex</a>
</li>
<li>round_total_
: <a class="el" href="classOpenMS_1_1TOPPASVertex.html#a32977440cc590fd8f6815392ac93ef68">TOPPASVertex</a>
</li>
<li>roundBasedMode()
: <a class="el" href="classOpenMS_1_1TOPPASMergerVertex.html#ab6cf5f90335953038c6052e82ded318f">TOPPASMergerVertex</a>
</li>
<li>rounding_errors_
: <a class="el" href="classOpenMS_1_1ims_1_1RealMassDecomposer.html#a073bf185839c7486fc98ba7d0a9a7463">RealMassDecomposer</a>
</li>
<li>RoundPackage
: <a class="el" href="classOpenMS_1_1TOPPASVertex.html#a421aaf9392b96c06e334c6a148a04e93">TOPPASVertex</a>
</li>
<li>RoundPackageConstIt
: <a class="el" href="classOpenMS_1_1TOPPASVertex.html#af3e4784ee641defd5b89fb1b51065d5a">TOPPASVertex</a>
</li>
<li>RoundPackageIt
: <a class="el" href="classOpenMS_1_1TOPPASVertex.html#a968be1628053bd7c083e363882af3971">TOPPASVertex</a>
</li>
<li>RoundPackages
: <a class="el" href="classOpenMS_1_1TOPPASVertex.html#a6105e5f2708c2f3e7015b883e61728f4">TOPPASVertex</a>
</li>
<li>row()
: <a class="el" href="classOpenMS_1_1Matrix.html#a7ed1f4eb50a0d5575514ea51e7c2fe03">Matrix< Value ></a>
</li>
<li>row_
: <a class="el" href="classOpenMS_1_1BaseVisualizerGUI.html#ab34641090aa3943e886526f911e1782a">BaseVisualizerGUI</a>
, <a class="el" href="classOpenMS_1_1QcMLFile.html#a4afd466c8ba751012ef01fde24b12941">QcMLFile</a>
</li>
<li>rowIndex()
: <a class="el" href="classOpenMS_1_1Matrix.html#adfcef754b6b67b0e2168649f2e1f322a">Matrix< Value ></a>
</li>
<li>rownames_
: <a class="el" href="structOpenSwath_1_1DataMatrix.html#aec7848281006030f4b73ad0dbb6ae5aa">DataMatrix</a>
</li>
<li>rows()
: <a class="el" href="classOpenMS_1_1Matrix.html#aeb005fd1250a41fce857f8be85a46843">Matrix< Value ></a>
</li>
<li>rows_
: <a class="el" href="classOpenMS_1_1Matrix.html#abefd2627230d15d4f7d82cb130c3a394">Matrix< Value ></a>
</li>
<li>rsd_
: <a class="el" href="classOpenMS_1_1Math_1_1LinearRegression.html#ae420fad2f5cf2eba659b3c789d7ae444">LinearRegression</a>
</li>
<li>RT
: <a class="el" href="classOpenMS_1_1QTClusterFinder.html#a06fc87d81c62e9abb8790b6e5713c55baf388fcb6d444ef59841ef549ca6ee0da">QTClusterFinder</a>
, <a class="el" href="classOpenMS_1_1StablePairFinder.html#adf764cbdea00d65edcd07bb9953ad2b7af388fcb6d444ef59841ef549ca6ee0da">StablePairFinder</a>
, <a class="el" href="classOpenMS_1_1FeatureFinderAlgorithmMRM.html#a80155586fa275b28773c9b203f52cabaaf388fcb6d444ef59841ef549ca6ee0da">FeatureFinderAlgorithmMRM< PeakType, FeatureType ></a>
</li>
<li>rt
: <a class="el" href="structOpenSwath_1_1Peptide.html#ae5ee906bf451a6150d80754f4068dc58">Peptide</a>
</li>
<li>RT
: <a class="el" href="structOpenMS_1_1FeatureFinderAlgorithmIsotopeWavelet_1_1BoxElement.html#afc4478a0397a76fef003746ff45fc201">FeatureFinderAlgorithmIsotopeWavelet< PeakType, FeatureType >::BoxElement</a>
, <a class="el" href="structOpenMS_1_1Interfaces_1_1SpectrumMeta.html#aa4f3cdb2683e5ca5c4210c5891eb9603">SpectrumMeta</a>
, <a class="el" href="classOpenMS_1_1Peak2D.html#ac2d92631c8f762c7e9afe43f11e1f018af388fcb6d444ef59841ef549ca6ee0da">Peak2D</a>
, <a class="el" href="structOpenMS_1_1IsotopeWaveletTransform_1_1BoxElement.html#afc4478a0397a76fef003746ff45fc201">IsotopeWaveletTransform< PeakType >::BoxElement</a>
, <a class="el" href="structOpenSwath_1_1SpectrumMeta.html#aa4f3cdb2683e5ca5c4210c5891eb9603">SpectrumMeta</a>
, <a class="el" href="classOpenMS_1_1ModelFitter.html#a6b7b47dd702d9e331586d485013fd1eaaf388fcb6d444ef59841ef549ca6ee0da">ModelFitter< PeakType, FeatureType ></a>
</li>
<li>rt
: <a class="el" href="structRNPxlReportRow.html#a365131e721e286ddc62d0e6e60f382a1">RNPxlReportRow</a>
, <a class="el" href="classOpenMS_1_1SILACPoint.html#a365131e721e286ddc62d0e6e60f382a1">SILACPoint</a>
, <a class="el" href="structOpenSwath_1_1LightPeptide.html#ae5ee906bf451a6150d80754f4068dc58">LightPeptide</a>
</li>
<li>rt_
: <a class="el" href="classOpenMS_1_1PepXMLFile.html#a51db91c41ce0919dd864710eb01a99aa">PepXMLFile</a>
</li>
<li>rt_bridge_
: <a class="el" href="classOpenMS_1_1InclusionExclusionList_1_1WindowDistance__.html#a0ab668bebd95ca6e5effa344be9c4731">InclusionExclusionList::WindowDistance_</a>
</li>
<li>rt_calibrated
: <a class="el" href="structOpenMS_1_1TransitionTSVReader_1_1TSVTransition.html#add0f3be99b097cd34fcf432c63a66481">TransitionTSVReader::TSVTransition</a>
</li>
<li>rt_coef
: <a class="el" href="classOpenMS_1_1ConfidenceScoring.html#a888c258d17bb022450eb4fa36d51b680">ConfidenceScoring</a>
</li>
<li>rt_end
: <a class="el" href="structOpenMS_1_1RawMSSignalSimulation_1_1ContaminantInfo.html#a03c3071ca40e4f3dcd6aa74c2b08f092">RawMSSignalSimulation::ContaminantInfo</a>
</li>
<li>rt_extraction_window_
: <a class="el" href="classOpenMS_1_1MRMFeatureFinderScoring.html#a22f959483c21d84714446ca1dda67305">MRMFeatureFinderScoring</a>
</li>
<li>RT_GAUSSIAN
: <a class="el" href="classOpenMS_1_1RawMSSignalSimulation.html#a118b7b87c79b44b10112206841e9fa99ab7fc9e3ba569fdda4990834af71eba55">RawMSSignalSimulation</a>
</li>
<li>RT_index
: <a class="el" href="structOpenMS_1_1IsotopeWaveletTransform_1_1BoxElement.html#aba2639fbb6538864cefddd4d6c8ef417">IsotopeWaveletTransform< PeakType >::BoxElement</a>
</li>
<li>rt_input_data_
: <a class="el" href="classOpenMS_1_1ModelFitter.html#a100b9653d9495c862bc57cee3dcdbb3f">ModelFitter< PeakType, FeatureType ></a>
</li>
<li>RT_interleave_
: <a class="el" href="classOpenMS_1_1FeatureFinderAlgorithmIsotopeWavelet.html#a0864e2810fe75ef5519f320c957efb1b">FeatureFinderAlgorithmIsotopeWavelet< PeakType, FeatureType ></a>
</li>
<li>rt_label_
: <a class="el" href="classOpenMS_1_1TOPPViewBase.html#ae56fd00bb242dcd41b6c096d2ab87a4b">TOPPViewBase</a>
</li>
<li>rt_mapping_
: <a class="el" href="classOpenMS_1_1Internal_1_1MascotXMLHandler.html#a877885217d09009e01a320114fba4961">MascotXMLHandler</a>
</li>
<li>rt_max_
: <a class="el" href="classOpenMS_1_1SpectraMerger_1_1SpectraDistance__.html#addd12cc59f1a0dcd6b23ecd7fb291dfd">SpectraMerger::SpectraDistance_</a>
</li>
<li>rt_max_spacing
: <a class="el" href="classOpenMS_1_1SILACClustering.html#a274c7a9a60aa78250b1475700c0e7ec9">SILACClustering</a>
</li>
<li>rt_min
: <a class="el" href="classOpenMS_1_1SILACClustering.html#a283c8b2d66dc9ee37e4feb0d82537808">SILACClustering</a>
, <a class="el" href="classOpenMS_1_1SILACAnalyzer.html#a4d532bb9efa7c2aeaedbcf5ff0c13826">SILACAnalyzer</a>
</li>
<li>rt_model_file_
: <a class="el" href="classOpenMS_1_1RTSimulation.html#a2ca80ee9bf721feebb4f9db372633a08">RTSimulation</a>
</li>
<li>rt_norm_
: <a class="el" href="classOpenMS_1_1ConfidenceScoring.html#ae06e91f2d119f10cd2a1696dd068348a">ConfidenceScoring</a>
</li>
<li>rt_normalization_factor_
: <a class="el" href="classOpenMS_1_1MRMFeatureFinderScoring.html#a18149f9f24aaea0ec584e290620fbd20">MRMFeatureFinderScoring</a>
</li>
<li>rt_probability
: <a class="el" href="structOpenMS_1_1PSLPFormulation_1_1IndexTriple.html#ad00b56bf94e188184c11c6fd0af6f914">PSLPFormulation::IndexTriple</a>
</li>
<li>rt_prot_map_
: <a class="el" href="classOpenMS_1_1PrecursorIonSelectionPreprocessing.html#ab87e5794342bc6916c2eff56227f1492">PrecursorIonSelectionPreprocessing</a>
</li>
<li>rt_range_
: <a class="el" href="classOpenMS_1_1PeakFileOptions.html#a995a89bb02a0ffb41ee5b7d69d4dda9b">PeakFileOptions</a>
, <a class="el" href="classOpenMS_1_1FeatureFileOptions.html#a995a89bb02a0ffb41ee5b7d69d4dda9b">FeatureFileOptions</a>
</li>
<li>RT_RECTANGULAR
: <a class="el" href="classOpenMS_1_1RawMSSignalSimulation.html#a118b7b87c79b44b10112206841e9fa99ae950ac3b5ed4f0c15e08535f6f61defc">RawMSSignalSimulation</a>
</li>
<li>rt_sampling_rate_
: <a class="el" href="classOpenMS_1_1RTSimulation.html#a5070ae6e05eee20e2092127475da3951">RTSimulation</a>
</li>
<li>rt_shift_
: <a class="el" href="classOpenMS_1_1Compomer.html#a1df0bce61094fa69cb0d0864792856c5">Compomer</a>
, <a class="el" href="classOpenMS_1_1Adduct.html#a1df0bce61094fa69cb0d0864792856c5">Adduct</a>
</li>
<li>rt_start
: <a class="el" href="structOpenMS_1_1RawMSSignalSimulation_1_1ContaminantInfo.html#a2810664da1ca109eecd2c9cd2fcaa733">RawMSSignalSimulation::ContaminantInfo</a>
</li>
<li>rt_stat_
: <a class="el" href="classOpenMS_1_1ModelFitter.html#a3c4dee13554dda34293916d83f811aaa">ModelFitter< PeakType, FeatureType ></a>
</li>
<li>rt_threshold
: <a class="el" href="classOpenMS_1_1SILACAnalyzer.html#a920f0e916452ca37d0b646e8e7ed7318">SILACAnalyzer</a>
</li>
<li>rt_tol_
: <a class="el" href="classOpenMS_1_1PepXMLFile.html#a4b56759c1db4a79eb15d182c26752227">PepXMLFile</a>
</li>
<li>rt_tolerance_
: <a class="el" href="classOpenMS_1_1IDMapper.html#a73f60e6ff36e6b7fd8f631003521843c">IDMapper</a>
</li>
<li>rt_trafo_
: <a class="el" href="classOpenMS_1_1ConfidenceScoring.html#a893246275c8a2c59ed7a23d062b70412">ConfidenceScoring</a>
</li>
<li>RT_votes_cutoff_
: <a class="el" href="classOpenMS_1_1FeatureFinderAlgorithmIsotopeWavelet.html#a3fd609fd7b023618f7f2c5c64e8ed803">FeatureFinderAlgorithmIsotopeWavelet< PeakType, FeatureType ></a>
</li>
<li>RTBegin()
: <a class="el" href="classOpenMS_1_1MSExperiment.html#aaa28bff92147612bdfc8ac6892395c93">MSExperiment< PeakT, ChromatogramPeakT ></a>
, <a class="el" href="classOpenMS_1_1MSChromatogram.html#a9665faf97a805398a171489c9b0660ed">MSChromatogram< PeakT ></a>
, <a class="el" href="classOpenMS_1_1MSExperiment.html#adb2f0f3e10754ca4dc7be677f15689a3">MSExperiment< PeakT, ChromatogramPeakT ></a>
, <a class="el" href="classOpenMS_1_1MSChromatogram.html#aaa28bff92147612bdfc8ac6892395c93">MSChromatogram< PeakT ></a>
</li>
<li>RTEnd()
: <a class="el" href="classOpenMS_1_1MSChromatogram.html#a5f9b950ce9dd8beba1afb32cc934b567">MSChromatogram< PeakT ></a>
, <a class="el" href="classOpenMS_1_1MSExperiment.html#a5f9b950ce9dd8beba1afb32cc934b567">MSExperiment< PeakT, ChromatogramPeakT ></a>
, <a class="el" href="classOpenMS_1_1MSChromatogram.html#a5d71e35a3b33916bda93aecc27fd75b6">MSChromatogram< PeakT ></a>
</li>
<li>RtIterator()
: <a class="el" href="structOpenMS_1_1Internal_1_1RtIterator.html#a3cfc442fa2164d701b9837c73acc3e6c">RtIterator< FeaFiModuleType ></a>
</li>
<li>RTMapping
: <a class="el" href="classOpenMS_1_1MascotXMLFile.html#a1f47840b5fb63cf1ad9f823ac2e12227">MascotXMLFile</a>
, <a class="el" href="classOpenMS_1_1Internal_1_1MascotXMLHandler.html#a6a5b7dd69471128e9cb680649b058f4f">MascotXMLHandler</a>
</li>
<li>RTmax_
: <a class="el" href="structOpenMS_1_1InclusionExclusionList_1_1IEWindow.html#ae6203af4dfe6b3dc034e1133da89756f">InclusionExclusionList::IEWindow</a>
</li>
<li>RTmin_
: <a class="el" href="structOpenMS_1_1InclusionExclusionList_1_1IEWindow.html#afd5b56017f716c165df35480f7042bd8">InclusionExclusionList::IEWindow</a>
</li>
<li>rts
: <a class="el" href="classOpenMS_1_1TargetedExperimentHelper_1_1Peptide.html#a04646756cfb9003cfa0fdbe7bafef165">Peptide</a>
, <a class="el" href="classOpenMS_1_1TargetedExperimentHelper_1_1Compound.html#a04646756cfb9003cfa0fdbe7bafef165">Compound</a>
, <a class="el" href="classOpenMS_1_1ReactionMonitoringTransition.html#af35967b3faeadee6a97b446911a79757">ReactionMonitoringTransition</a>
</li>
<li>rts_
: <a class="el" href="classOpenMS_1_1IncludeExcludeTarget.html#a5f4e68f3e2ffd6473e11a44c69e0f1af">IncludeExcludeTarget</a>
</li>
<li>RTSimulation()
: <a class="el" href="classOpenMS_1_1RTSimulation.html#a2318631d862ec8e34f7ffefa4706c503">RTSimulation</a>
</li>
<li>rubber_band_
: <a class="el" href="classOpenMS_1_1SpectrumCanvas.html#ada746321d9ce7e662479d12317b2898b">SpectrumCanvas</a>
</li>
<li>rules_
: <a class="el" href="classOpenMS_1_1Internal_1_1SemanticValidator.html#ad5846355df29e515d6215425a3ca81d1">SemanticValidator</a>
, <a class="el" href="classOpenMS_1_1CVMappingFile.html#aa69465880d51cbf62dc832ce75e4ef59">CVMappingFile</a>
</li>
<li>run()
: <a class="el" href="classOpenMS_1_1FeatureFinderAlgorithmSimple.html#a72fcb26a14f6beb1c3fbace9ab3e7dbb">FeatureFinderAlgorithmSimple< PeakType, FeatureType ></a>
, <a class="el" href="classOpenMS_1_1TOPPASOutputFileListVertex.html#a72fcb26a14f6beb1c3fbace9ab3e7dbb">TOPPASOutputFileListVertex</a>
, <a class="el" href="classOpenMS_1_1ItraqQuantifier.html#acdee771faf76f323d2d812ad19ce65f6">ItraqQuantifier</a>
, <a class="el" href="classOpenMS_1_1ItraqChannelExtractor.html#a46f345431ea87a99dd5931fd8cd3df9a">ItraqChannelExtractor</a>
, <a class="el" href="classOpenMS_1_1TOPPASToolVertex.html#a13a43e6d814de94978c515cb084873b1">TOPPASToolVertex</a>
, <a class="el" href="classOpenMS_1_1QTClusterFinder.html#a313fd816960d7cccb7fe4b608bc755e0">QTClusterFinder</a>
, <a class="el" href="classOpenMS_1_1FeatureFinderAlgorithm.html#a18954417d3124a8095783ea13dc6d00b">FeatureFinderAlgorithm< PeakType, FeatureType ></a>
, <a class="el" href="classOpenMS_1_1BaseGroupFinder.html#ac755b617b353190b1af9291688c49b5b">BaseGroupFinder</a>
, <a class="el" href="classOpenMS_1_1PoseClusteringAffineSuperimposer.html#a2cc9eeba48ed0109a760d69ebc4da4ca">PoseClusteringAffineSuperimposer</a>
, <a class="el" href="classOpenMS_1_1TOPPASInputFileListVertex.html#a72fcb26a14f6beb1c3fbace9ab3e7dbb">TOPPASInputFileListVertex</a>
, <a class="el" href="classOpenMS_1_1FeatureFinder.html#a001d4adf21652ff6cdd58efe56e4fb1c">FeatureFinder</a>
, <a class="el" href="classOpenMS_1_1FeatureFinderAlgorithmIsotopeWavelet.html#a13a43e6d814de94978c515cb084873b1">FeatureFinderAlgorithmIsotopeWavelet< PeakType, FeatureType ></a>
, <a class="el" href="classOpenMS_1_1BaseSuperimposer.html#a4bd99d4ea9adef4440fcf87b993c7930">BaseSuperimposer</a>
, <a class="el" href="classOpenMS_1_1FeatureFinderAlgorithmPicked.html#a72fcb26a14f6beb1c3fbace9ab3e7dbb">FeatureFinderAlgorithmPicked< PeakType, FeatureType ></a>
, <a class="el" href="classOpenMS_1_1MascotRemoteQuery.html#a13a43e6d814de94978c515cb084873b1">MascotRemoteQuery</a>
, <a class="el" href="classOpenMS_1_1QTClusterFinder.html#af5d5ae450a1a115fbc2eebe1f840e924">QTClusterFinder</a>
, <a class="el" href="classOpenMS_1_1AccurateMassSearchEngine.html#a3fc2b50ae96345542e487e2d8640d0a5">AccurateMassSearchEngine</a>
, <a class="el" href="classOpenMS_1_1MassTraceDetection.html#ae333bfad13b6c7a103bb133c5872efc5">MassTraceDetection</a>
, <a class="el" href="classOpenMS_1_1AccurateMassSearchEngine.html#ab8d793b67d5d760d207b3881f7e80909">AccurateMassSearchEngine</a>
, <a class="el" href="classOpenMS_1_1LabeledPairFinder.html#afe5cf49fa30622901babefc6cd0cdc3c">LabeledPairFinder</a>
, <a class="el" href="classOpenMS_1_1MassTraceDetection.html#afc6562aa8d2b9ad4329f71dbba3b00ab">MassTraceDetection</a>
, <a class="el" href="classOpenMS_1_1TOPPASVertex.html#a72fcb26a14f6beb1c3fbace9ab3e7dbb">TOPPASVertex</a>
, <a class="el" href="classOpenMS_1_1FeatureFinderAlgorithmSimplest.html#a72fcb26a14f6beb1c3fbace9ab3e7dbb">FeatureFinderAlgorithmSimplest< PeakType, FeatureType ></a>
, <a class="el" href="classOpenMS_1_1FeatureFinderAlgorithmMRM.html#a72fcb26a14f6beb1c3fbace9ab3e7dbb">FeatureFinderAlgorithmMRM< PeakType, FeatureType ></a>
, <a class="el" href="classOpenMS_1_1FeatureFinderAlgorithmSH.html#a72fcb26a14f6beb1c3fbace9ab3e7dbb">FeatureFinderAlgorithmSH< PeakType, FeatureType ></a>
, <a class="el" href="classOpenMS_1_1PoseClusteringShiftSuperimposer.html#a2cc9eeba48ed0109a760d69ebc4da4ca">PoseClusteringShiftSuperimposer</a>
, <a class="el" href="classOpenMS_1_1FeatureFindingMetabo.html#a62d03f88ece395e7ab1badee7e4683ad">FeatureFindingMetabo</a>
, <a class="el" href="classOpenMS_1_1SimplePairFinder.html#afe5cf49fa30622901babefc6cd0cdc3c">SimplePairFinder</a>
, <a class="el" href="classOpenMS_1_1StablePairFinder.html#a313fd816960d7cccb7fe4b608bc755e0">StablePairFinder</a>
, <a class="el" href="classOpenMS_1_1TOPPASMergerVertex.html#a72fcb26a14f6beb1c3fbace9ab3e7dbb">TOPPASMergerVertex</a>
</li>
<li>run_()
: <a class="el" href="classOpenMS_1_1QTClusterFinder.html#af59f82c8ff9193c433061f734fc7529e">QTClusterFinder</a>
</li>
<li>run_all()
: <a class="el" href="classOpenMS_1_1SILACAnalyzer.html#a63ca5fae46c85b6bc06a1dc801c7467f">SILACAnalyzer</a>
</li>
<li>run_id_
: <a class="el" href="classOpenMS_1_1QcMLFile.html#af80ea356a343775b2e45ae43f3ce2fc0">QcMLFile</a>
</li>
<li>run_Name_ID_map_
: <a class="el" href="classOpenMS_1_1QcMLFile.html#ac4ede9b7aa0e08ae3e7685a2fc6c9e16">QcMLFile</a>
</li>
<li>runNextProcess()
: <a class="el" href="classOpenMS_1_1TOPPASScene.html#abae907003f6e4113deae94f6e55c40be">TOPPASScene</a>
</li>
<li>running_
: <a class="el" href="classOpenMS_1_1TOPPASScene.html#aa440b02cc99bc6923375b0c9db2f2dca">TOPPASScene</a>
</li>
<li>running_avg_
: <a class="el" href="classOpenMS_1_1SimpleExtender.html#a5e88ec4351e6e6835be11ef6fd88a800">SimpleExtender< PeakType, FeatureType ></a>
</li>
<li>runPipeline()
: <a class="el" href="classOpenMS_1_1TOPPASScene.html#a4fe7e762cb5bf01fefb8e1a5d0071e1a">TOPPASScene</a>
, <a class="el" href="classOpenMS_1_1TOPPASBase.html#a4fe7e762cb5bf01fefb8e1a5d0071e1a">TOPPASBase</a>
</li>
<li>runQualityAts_
: <a class="el" href="classOpenMS_1_1QcMLFile.html#a9a64911a7c3f6a46140f5709193f9c1a">QcMLFile</a>
</li>
<li>runQualityQPs_
: <a class="el" href="classOpenMS_1_1QcMLFile.html#a00e21999b0b05556b2eea5cff8cab5a1">QcMLFile</a>
</li>
<li>runTOPPTool_()
: <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a923163eea1a103f7faaaa25b374e536a">TOPPViewBase</a>
</li>
<li>rWidth
: <a class="el" href="structOpenMS_1_1OptimizationFunctions_1_1PenaltyFactors.html#a478a632c0b5a363e215061428eee1a1c">PenaltyFactors</a>
</li>
</ul>
</div><!-- contents -->
<HR style="height:1px; border:none; border-top:1px solid #c0c0c0;">
<TABLE width="100%" border="0">
<TR>
<TD><font color="#c0c0c0">OpenMS / TOPP release 1.11.1</font></TD>
<TD align="right"><font color="#c0c0c0">Documentation generated on Thu Nov 14 2013 11:20:59 using doxygen 1.8.5</font></TD>
</TR>
</TABLE>
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