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|
<HTML>
<HEAD>
<TITLE>Class Members</TITLE>
<LINK HREF="doxygen.css" REL="stylesheet" TYPE="text/css">
<LINK HREF="style_ini.css" REL="stylesheet" TYPE="text/css">
</HEAD>
<BODY BGCOLOR="#FFFFFF">
<A href="index.html">Home</A> ·
<A href="classes.html">Classes</A> ·
<A href="annotated.html">Annotated Classes</A> ·
<A href="modules.html">Modules</A> ·
<A href="functions_func.html">Members</A> ·
<A href="namespaces.html">Namespaces</A> ·
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<!-- Generated by Doxygen 1.8.5 -->
</div><!-- top -->
<div class="contents">
<div class="textblock">Here is a list of all class members with links to the classes they belong to:</div>
<h3><a class="anchor" id="index_t"></a>- t -</h3><ul>
<li>t_star_
: <a class="el" href="classOpenMS_1_1Math_1_1LinearRegression.html#a89f82fed143d8e6d0faf791983e6b775">LinearRegression</a>
</li>
<li>tab_bar_
: <a class="el" href="classOpenMS_1_1TOPPASBase.html#a6ff72b84ff2b11f24b3c4476b5f2043e">TOPPASBase</a>
, <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a3164ba2ec5ebaa2b9743f6d2f37c09e6">TOPPViewBase</a>
</li>
<li>tab_width_
: <a class="el" href="classOpenMS_1_1FuzzyStringComparator.html#a27e5961d48a3539c63be1551c7f13c9a">FuzzyStringComparator</a>
</li>
<li>tabAt_()
: <a class="el" href="classOpenMS_1_1EnhancedTabBar.html#a4dab11df03da15e21f6d66a0e7c95e51">EnhancedTabBar</a>
, <a class="el" href="classOpenMS_1_1TOPPASTabBar.html#a4dab11df03da15e21f6d66a0e7c95e51">TOPPASTabBar</a>
</li>
<li>table_
: <a class="el" href="classOpenMS_1_1DBOpenDialog.html#a618d1c448451c3bd133bb1cd34dcd046">DBOpenDialog</a>
</li>
<li>table_steps_
: <a class="el" href="classOpenMS_1_1IsotopeWavelet.html#a33499e52d86d1c93d57d98be1740606d">IsotopeWavelet</a>
</li>
<li>table_widget_
: <a class="el" href="classOpenMS_1_1SpectraIdentificationViewWidget.html#a4aaad14af968c0290f4d87f05bdc4896">SpectraIdentificationViewWidget</a>
</li>
<li>tableRows
: <a class="el" href="structOpenMS_1_1QcMLFile_1_1Attachment.html#aae78735493d67ec24c933397a3c3f305">QcMLFile::Attachment</a>
</li>
<li>tag()
: <a class="el" href="classOpenMS_1_1DocumentIDTagger.html#a26dcd47cc5aeecd27330b7813b6056b2">DocumentIDTagger</a>
</li>
<li>tag_
: <a class="el" href="classOpenMS_1_1Internal_1_1PTMXMLHandler.html#a4efa4aca7642864fed4e7e4cca9e2a79">PTMXMLHandler</a>
, <a class="el" href="classOpenMS_1_1Internal_1_1ToolDescriptionHandler.html#a4efa4aca7642864fed4e7e4cca9e2a79">ToolDescriptionHandler</a>
, <a class="el" href="classOpenMS_1_1Internal_1_1TraMLHandler.html#a4efa4aca7642864fed4e7e4cca9e2a79">TraMLHandler</a>
, <a class="el" href="classOpenMS_1_1Internal_1_1UnimodXMLHandler.html#a4efa4aca7642864fed4e7e4cca9e2a79">UnimodXMLHandler</a>
, <a class="el" href="classOpenMS_1_1Internal_1_1XTandemInfileXMLHandler.html#a4efa4aca7642864fed4e7e4cca9e2a79">XTandemInfileXMLHandler</a>
, <a class="el" href="classOpenMS_1_1OMSSAXMLFile.html#a4efa4aca7642864fed4e7e4cca9e2a79">OMSSAXMLFile</a>
, <a class="el" href="classOpenMS_1_1QcMLFile.html#a4efa4aca7642864fed4e7e4cca9e2a79">QcMLFile</a>
, <a class="el" href="classOpenMS_1_1XTandemXMLFile.html#a4efa4aca7642864fed4e7e4cca9e2a79">XTandemXMLFile</a>
, <a class="el" href="classOpenMS_1_1CVMappingFile.html#a4efa4aca7642864fed4e7e4cca9e2a79">CVMappingFile</a>
, <a class="el" href="classOpenMS_1_1Internal_1_1MascotXMLHandler.html#a4efa4aca7642864fed4e7e4cca9e2a79">MascotXMLHandler</a>
, <a class="el" href="classOpenMS_1_1Internal_1_1MzIdentMLHandler.html#a4efa4aca7642864fed4e7e4cca9e2a79">MzIdentMLHandler</a>
, <a class="el" href="classOpenMS_1_1Internal_1_1MzQuantMLHandler.html#a4efa4aca7642864fed4e7e4cca9e2a79">MzQuantMLHandler</a>
</li>
<li>tag_count_
: <a class="el" href="classOpenMS_1_1InspectInfile.html#a5206bb35ff069da4e5f31547c7d12105">InspectInfile</a>
</li>
<li>tag_peaks_with_spectrum_ID()
: <a class="el" href="classOpenMS_1_1LCMS.html#a2615876a9806c412d4d258537994a860">LCMS</a>
</li>
<li>Tagging()
: <a class="el" href="classOpenMS_1_1Tagging.html#a84c712f1e96dc5ab0d214d97eed92e84">Tagging</a>
</li>
<li>taggingmass_shift_
: <a class="el" href="classOpenMS_1_1TaggingVisualizer.html#a4395fa2a27580ca2d28888d6230e5303">TaggingVisualizer</a>
</li>
<li>taggingvariant_
: <a class="el" href="classOpenMS_1_1TaggingVisualizer.html#a10c0bc227259fba1a53ff7533840b49a">TaggingVisualizer</a>
</li>
<li>TaggingVisualizer()
: <a class="el" href="classOpenMS_1_1TaggingVisualizer.html#a0ec1c7ba3e09088bc93aa862d8f279d6">TaggingVisualizer</a>
</li>
<li>tags
: <a class="el" href="structOpenMS_1_1Param_1_1ParamEntry.html#aa39a5392fa8b2cde9ced944aa1571110">Param::ParamEntry</a>
, <a class="el" href="classOpenMS_1_1Internal_1_1ParamXMLHandler.html#a6fb921d43efabbf24e151fc2d86038e3">ParamXMLHandler</a>
, <a class="el" href="structOpenMS_1_1ParameterInformation.html#a6fb921d43efabbf24e151fc2d86038e3">ParameterInformation</a>
</li>
<li>tags_
: <a class="el" href="classOpenMS_1_1SuffixArraySeqan.html#a26d1215083518387975aecec042c0fc0">SuffixArraySeqan</a>
, <a class="el" href="classOpenMS_1_1SuffixArrayTrypticCompressed.html#a26d1215083518387975aecec042c0fc0">SuffixArrayTrypticCompressed</a>
</li>
<li>tags_open_
: <a class="el" href="classOpenMS_1_1Internal_1_1MascotXMLHandler.html#a711619183098a4717cf8f4dfdcd228e7">MascotXMLHandler</a>
</li>
<li>target
: <a class="el" href="structOpenMS_1_1Logger_1_1LogStreamBuf_1_1StreamStruct.html#ac81e6c91ece719cfba1886884fb847f3">LogStreamBuf::StreamStruct</a>
, <a class="el" href="structOpenMS_1_1Internal_1_1FileMapping.html#abeaebe344002fdda7a413305f5382548">FileMapping</a>
</li>
<li>TARGET
: <a class="el" href="classOpenMS_1_1ReactionMonitoringTransition.html#a2ffb0f68660b8afa7ba925c3bf193946a09aa9e75617e9d8719738ca163c09137">ReactionMonitoringTransition</a>
</li>
<li>target_in_param_
: <a class="el" href="classOpenMS_1_1TOPPASEdge.html#a3df5ad1fecc015ccaf745612680f6679">TOPPASEdge</a>
</li>
<li>target_input_param_indices_
: <a class="el" href="classOpenMS_1_1TOPPASIOMappingDialog.html#a387a03a0b6aa922af71b484052f0d264">TOPPASIOMappingDialog</a>
</li>
<li>TargetedExperiment()
: <a class="el" href="classOpenMS_1_1TargetedExperiment.html#a4233d5e51ab94f269e230525d28b2d44">TargetedExperiment</a>
</li>
<li>TargetedExpType
: <a class="el" href="classOpenMS_1_1MRMFeatureFinderScoring.html#ab93154c1962d6ccb0a7d8f548ea0a9da">MRMFeatureFinderScoring</a>
</li>
<li>targetMzXML
: <a class="el" href="classOpenMS_1_1FTPeakDetectController.html#a80f8b25ae517b0c4d1be5c33efbd09f7">FTPeakDetectController</a>
</li>
<li>targets_
: <a class="el" href="classOpenMS_1_1TargetedExperiment.html#a221e5a78a25ae13b2cfe9b4f2caeadb8">TargetedExperiment</a>
</li>
<li>tau_
: <a class="el" href="classOpenMS_1_1EGHFitter1D.html#a38eed38c64281037978297d5e13e85af">EGHFitter1D</a>
, <a class="el" href="classOpenMS_1_1EGHModel.html#a38eed38c64281037978297d5e13e85af">EGHModel</a>
, <a class="el" href="classOpenMS_1_1EGHTraceFitter.html#ad743476b82afa034e95d476de944af85">EGHTraceFitter< PeakType ></a>
</li>
<li>taxid
: <a class="el" href="structOpenMS_1_1MzTabProteinSectionRow.html#a0228dcadf9dee86d1d7903313271d3cc">MzTabProteinSectionRow</a>
, <a class="el" href="structOpenMS_1_1MzTabSmallMoleculeSectionRow.html#a0228dcadf9dee86d1d7903313271d3cc">MzTabSmallMoleculeSectionRow</a>
</li>
<li>taxon_
: <a class="el" href="classOpenMS_1_1XTandemInfile.html#a2ebd224514b3401266ded5e29f6530e2">XTandemInfile</a>
</li>
<li>taxonomy
: <a class="el" href="structOpenMS_1_1ProteinIdentification_1_1SearchParameters.html#a3ebfdcd6ebd0f389bf17b098a002c531">ProteinIdentification::SearchParameters</a>
</li>
<li>taxonomy_
: <a class="el" href="classOpenMS_1_1MascotInfile.html#a1bcd6b859be00c67e8276dd446e8200d">MascotInfile</a>
, <a class="el" href="classOpenMS_1_1ProteinIdentificationVisualizer.html#ae674d0b9142d8726b9065163747e481c">ProteinIdentificationVisualizer</a>
</li>
<li>taxonomy_file_
: <a class="el" href="classOpenMS_1_1XTandemInfile.html#a9456cad8e17b1ceddd9fd6ca6f7bf9d2">XTandemInfile</a>
</li>
<li>td_
: <a class="el" href="classOpenMS_1_1Internal_1_1AcqusHandler.html#a7bbf0f40a8d48b308af3da11ad2f4525">AcqusHandler</a>
, <a class="el" href="classOpenMS_1_1Internal_1_1ToolDescriptionHandler.html#ae85d135718ca1b621fb8bb64c0b93696">ToolDescriptionHandler</a>
</li>
<li>td_vec_
: <a class="el" href="classOpenMS_1_1Internal_1_1ToolDescriptionHandler.html#a8613c14d194c31cfc0c13f4765533d16">ToolDescriptionHandler</a>
</li>
<li>TDC
: <a class="el" href="classOpenMS_1_1IonDetector.html#ab0301b5c82d74538dfffc98406254e11a09970273b87198398bb9192b84b8eea7">IonDetector</a>
</li>
<li>tde_
: <a class="el" href="classOpenMS_1_1Internal_1_1ToolDescriptionHandler.html#ad70c816cb88a289507cb4daebf16a681">ToolDescriptionHandler</a>
</li>
<li>TDF
: <a class="el" href="classOpenMS_1_1InstrumentSettings.html#af9e3bb003dab9b2cf00854a1eb3b01f0a5980df92dcce7a0e1e8bc482e4f07aa6">InstrumentSettings</a>
</li>
<li>technical_rng
: <a class="el" href="structOpenMS_1_1SimRandomNumberGenerator.html#a8764fd4a009fc26b72180f667d09f1ec">SimRandomNumberGenerator</a>
</li>
<li>temp_
: <a class="el" href="classOpenMS_1_1BaseVisualizer.html#a4abdf8d22a3099978d173e5379602676">BaseVisualizer< ObjectType ></a>
</li>
<li>temperature_
: <a class="el" href="classOpenMS_1_1Digestion.html#afdff0bc0179285f3edef11110ff9a53b">Digestion</a>
, <a class="el" href="classOpenMS_1_1HPLC.html#a1a24f2006eebb37bbc1b491821ee035b">HPLC</a>
</li>
<li>temporary_annotations_
: <a class="el" href="classOpenMS_1_1TOPPViewIdentificationViewBehavior.html#af1640ee25112566041bc61a76d635e0d">TOPPViewIdentificationViewBehavior</a>
</li>
<li>TENPERCENTVALLEY
: <a class="el" href="classOpenMS_1_1MassAnalyzer.html#a11053909f1f8edf7b9ccc41c1417ecf6a0c1c775554ef85e8a8f4e88933c62157">MassAnalyzer</a>
</li>
<li>term_name_
: <a class="el" href="classOpenMS_1_1CVMappingTerm.html#a1a12ecf5d5518fda55bbc79280d67fe0">CVMappingTerm</a>
</li>
<li>term_spec_
: <a class="el" href="classOpenMS_1_1ModificationDefinition.html#a059858470fd3918ed990b4fec35fb137">ModificationDefinition</a>
, <a class="el" href="classOpenMS_1_1ResidueModification.html#aefaeed6f109e37b40c6209b80c1bdb56">ResidueModification</a>
</li>
<li>Term_Specificity
: <a class="el" href="classOpenMS_1_1ResidueModification.html#aa9cd341ac30bebce3b85a3dc64baef65">ResidueModification</a>
</li>
<li>term_specs_
: <a class="el" href="classOpenMS_1_1Internal_1_1UnimodXMLHandler.html#a645f79e1f0a57f44e98761485d601d72">UnimodXMLHandler</a>
</li>
<li>terminate()
: <a class="el" href="classOpenMS_1_1Exception_1_1GlobalExceptionHandler.html#a31c3116122615d09816db09913050b46">GlobalExceptionHandler</a>
</li>
<li>terminateCurrentPipeline()
: <a class="el" href="classOpenMS_1_1TOPPASScene.html#a14b1defd9fb20417e7023330995df167">TOPPASScene</a>
</li>
<li>terminus
: <a class="el" href="structOpenMS_1_1PepXMLFile_1_1AminoAcidModification.html#aa4ca080975281a5791c1c7ee3ee6f8ab">PepXMLFile::AminoAcidModification</a>
</li>
<li>terms_
: <a class="el" href="classOpenMS_1_1ControlledVocabulary.html#a7969e2be0e6e17d8e97a0ae1b50acda5">ControlledVocabulary</a>
</li>
<li>test_mode_
: <a class="el" href="classOpenMS_1_1TOPPBase.html#a6e61791b6ff20c4e71142b700b0ad79a">TOPPBase</a>
</li>
<li>TestTOPPView
: <a class="el" href="classOpenMS_1_1TOPPViewBase.html#aac7cb20f300c841a51e6897976a619b2">TOPPViewBase</a>
</li>
<li>TEXT
: <a class="el" href="structOpenMS_1_1ParameterInformation.html#ad88a0c5c8eeb7dbff8fd81dc6d9c9d89a9a4a47c1606e295076055a9cc4373197">ParameterInformation</a>
</li>
<li>text_
: <a class="el" href="classOpenMS_1_1Annotation1DItem.html#a37ee175b95ded573c9648cd028fd0617">Annotation1DItem</a>
</li>
<li>text_fail
: <a class="el" href="structOpenMS_1_1Internal_1_1ToolExternalDetails.html#a8f79658b3dc75dc1be353d16782e53d3">ToolExternalDetails</a>
</li>
<li>text_finish
: <a class="el" href="structOpenMS_1_1Internal_1_1ToolExternalDetails.html#a6837a3be40cf695a18b6c66b17c80c64">ToolExternalDetails</a>
</li>
<li>text_startup
: <a class="el" href="structOpenMS_1_1Internal_1_1ToolExternalDetails.html#a5096bafbb3ec9dc4295473646e2091c0">ToolExternalDetails</a>
</li>
<li>TextFile()
: <a class="el" href="classOpenMS_1_1TextFile.html#a65b3f2d69d322ea4e246e5bb75508b7f">TextFile</a>
</li>
<li>th_
: <a class="el" href="classOpenMS_1_1BernNorm.html#ace847af34a7befe701c461af87ff150c">BernNorm</a>
</li>
<li>THEO_MZ
: <a class="el" href="classOpenMS_1_1MS2Info.html#a7db78b097be638415aa73cc6525ec2f2">MS2Info</a>
</li>
<li>theoretical_int
: <a class="el" href="structOpenMS_1_1FeatureFinderAlgorithmPickedHelperStructs_1_1MassTrace.html#a7db81fa54d4743c867872ac5b0938247">FeatureFinderAlgorithmPickedHelperStructs::MassTrace< PeakType ></a>
</li>
<li>theoretical_mz
: <a class="el" href="structOpenMS_1_1FeatureFinderAlgorithmPickedHelperStructs_1_1IsotopePattern.html#a7d03330cd21316709f10c3e9ca55f95c">FeatureFinderAlgorithmPickedHelperStructs::IsotopePattern</a>
</li>
<li>theoretical_pattern
: <a class="el" href="structOpenMS_1_1FeatureFinderAlgorithmPickedHelperStructs_1_1IsotopePattern.html#a5dbfbed553b8cf7f9ef1bcb2c4ac94ca">FeatureFinderAlgorithmPickedHelperStructs::IsotopePattern</a>
</li>
<li>TheoreticalIsotopePattern
: <a class="el" href="classOpenMS_1_1IsotopeDistributionCache.html#adb93f7d18f3a19b45d1a05e7c29dbeaa">IsotopeDistributionCache</a>
, <a class="el" href="classOpenMS_1_1SILACFilter.html#a13ba56ed55f3af6673f1f8799f2302bb">SILACFilter</a>
, <a class="el" href="classOpenMS_1_1FeatureFinderAlgorithmPicked.html#adb93f7d18f3a19b45d1a05e7c29dbeaa">FeatureFinderAlgorithmPicked< PeakType, FeatureType ></a>
</li>
<li>TheoreticalSpectrumGenerationDialog()
: <a class="el" href="classOpenMS_1_1TheoreticalSpectrumGenerationDialog.html#aa846cd3c003d25132b3b72126d354f7d">TheoreticalSpectrumGenerationDialog</a>
</li>
<li>TheoreticalSpectrumGenerator()
: <a class="el" href="classOpenMS_1_1TheoreticalSpectrumGenerator.html#a16ad886b52bd78e669ce54bbd8dbf40a">TheoreticalSpectrumGenerator</a>
</li>
<li>THERMOSPRAYINLET
: <a class="el" href="classOpenMS_1_1IonSource.html#a08b8f804d8602840858ce2d533db675faf72472484541d6de7bfe8151b04b7417">IonSource</a>
</li>
<li>THREADED_RANDOM_NUMBER_POOL_SIZE_
: <a class="el" href="classOpenMS_1_1RawMSSignalSimulation.html#ab49500496d9f3af2a1d4c0ced31118ff">RawMSSignalSimulation</a>
</li>
<li>threaded_random_numbers_
: <a class="el" href="classOpenMS_1_1RawMSSignalSimulation.html#a0ab3b2ea50a415b711d57ef6c888da8e">RawMSSignalSimulation</a>
</li>
<li>threaded_random_numbers_index_
: <a class="el" href="classOpenMS_1_1RawMSSignalSimulation.html#a515ff53e001edd54753be797f9da72aa">RawMSSignalSimulation</a>
</li>
<li>threads_active_
: <a class="el" href="classOpenMS_1_1TOPPASScene.html#a8f4e31fa1cf60984c20e17cc407654c5">TOPPASScene</a>
</li>
<li>three_letter_code_
: <a class="el" href="classOpenMS_1_1Residue.html#ab1690492238b38da2e6f03275f1509b2">Residue</a>
</li>
<li>thresh_p_
: <a class="el" href="classOpenMS_1_1MassExplainer.html#aec74a9086ba05f049bb715f265b582e7">MassExplainer</a>
</li>
<li>threshold_
: <a class="el" href="classOpenMS_1_1MapAlignmentAlgorithmSpectrumAlignment.html#a9b1cc0d5756927db86ca7ef37148b812">MapAlignmentAlgorithmSpectrumAlignment</a>
, <a class="el" href="classOpenMS_1_1ClusterHierarchical.html#ad7f9420c5db55e41dcaf2e64df8153e0">ClusterHierarchical</a>
, <a class="el" href="classOpenMS_1_1ThresholdMower.html#a1d4605354a0d2afded90b21307640c89">ThresholdMower</a>
</li>
<li>ThresholdMower()
: <a class="el" href="classOpenMS_1_1ThresholdMower.html#aae6df0f4e05b4ba123b8824f21688818">ThresholdMower</a>
</li>
<li>throw()
: <a class="el" href="classOpenMS_1_1Exception_1_1GlobalExceptionHandler.html#a543408816e80050a52fbe23b560961c0">GlobalExceptionHandler</a>
</li>
<li>TI
: <a class="el" href="classOpenMS_1_1IonSource.html#aa1f350d16338b42e2384db2e5aa4a3f4a205ce9325a3a2b1ca71be96bee9d7f89">IonSource</a>
</li>
<li>TICFilter()
: <a class="el" href="classOpenMS_1_1TICFilter.html#ae56529def72d6a52d14c133d59a30bc8">TICFilter</a>
</li>
<li>tick_level_
: <a class="el" href="classOpenMS_1_1AxisWidget.html#a951cbb75d27ab8ad09ec0b5a3cf6ca2f">AxisWidget</a>
</li>
<li>ticks_
: <a class="el" href="classOpenMS_1_1Annotation1DDistanceItem.html#a50b8101d19dd8d09f37c9b3c01c38873">Annotation1DDistanceItem</a>
</li>
<li>tileHorizontal()
: <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a810d43615db90ff9006f38c04875e0fc">TOPPViewBase</a>
</li>
<li>tileVertical()
: <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a746af7c702a43d03968e943cf13297f9">TOPPViewBase</a>
</li>
<li>TIME_LAG_FOCUSING
: <a class="el" href="classOpenMS_1_1Instrument.html#ad37f94415197fe6b7ab39e705877825ea1a077c77350bebae4e5a37f5ef2d4d98">Instrument</a>
</li>
<li>time_limit
: <a class="el" href="structOpenMS_1_1LPWrapper_1_1SolverParam.html#a4871244b32858fb8507476e38e9e445d">LPWrapper::SolverParam</a>
</li>
<li>timedOut()
: <a class="el" href="classOpenMS_1_1MascotRemoteQuery.html#a34f37a4e122b5f44c269cb4562b45130">MascotRemoteQuery</a>
</li>
<li>timeMessure()
: <a class="el" href="classOpenMS_1_1Spectrum3DOpenGLCanvas.html#a053c192fd409fd2cee5d8d9c6329af6e">Spectrum3DOpenGLCanvas</a>
</li>
<li>timeout_
: <a class="el" href="classOpenMS_1_1MascotRemoteQuery.html#a51c89d5878a142dbc62a0a642a02780c">MascotRemoteQuery</a>
</li>
<li>timepoint_vali_
: <a class="el" href="classOpenMS_1_1GradientVisualizer.html#a57157afa1d6325b8b066526214077d64">GradientVisualizer</a>
</li>
<li>timepoints_
: <a class="el" href="classOpenMS_1_1GradientVisualizer.html#af90b7d4144491eee858a542aef964c34">GradientVisualizer</a>
</li>
<li>timer
: <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a7a3412234a88a268b5194714cc18fdda">TOPPViewBase</a>
</li>
<li>timers_
: <a class="el" href="classOpenMS_1_1FileWatcher.html#abdd3b7832a2e17682961fefca5fb2353">FileWatcher</a>
</li>
<li>timerTriggered_()
: <a class="el" href="classOpenMS_1_1FileWatcher.html#a611bb7bb7a4c2e3f73bb0836305cee5f">FileWatcher</a>
</li>
<li>times_
: <a class="el" href="classOpenMS_1_1Gradient.html#a1f6c5c75927d4cbe8a3a4551296b714d">Gradient</a>
</li>
<li>timestamp
: <a class="el" href="structOpenMS_1_1Logger_1_1LogStreamBuf_1_1LogCacheStruct.html#a688e2ce5a1aba4178919f0de4745027e">LogStreamBuf::LogCacheStruct</a>
</li>
<li>TimeType
: <a class="el" href="classOpenMS_1_1StopWatch.html#ac2a678dc35572d4cca9f7684a26d34b6">StopWatch</a>
</li>
<li>TIndex
: <a class="el" href="classOpenMS_1_1SuffixArraySeqan.html#a2401ebe0488d209f33c011173b4067c0">SuffixArraySeqan</a>
</li>
<li>tissue
: <a class="el" href="structOpenMS_1_1MzTabSubIdMetaData.html#a504917171fed0f4b22afdab25bb2b741">MzTabSubIdMetaData</a>
</li>
<li>TIter
: <a class="el" href="classOpenMS_1_1SuffixArraySeqan.html#ac252e4ae3b28e15b76e9c79be16971b5">SuffixArraySeqan</a>
</li>
<li>TIterSpec
: <a class="el" href="classOpenMS_1_1SuffixArraySeqan.html#a98841c07459231c030299b14e2efdcdb">SuffixArraySeqan</a>
</li>
<li>title
: <a class="el" href="structOpenMS_1_1MzTabUnitIdMetaData.html#ab637686998869e8a3e0cdde6285e9d17">MzTabUnitIdMetaData</a>
</li>
<li>tmp_boxes_
: <a class="el" href="classOpenMS_1_1IsotopeWaveletTransform.html#a94d3b9a99282c26ecdc056eeaa26fea8">IsotopeWaveletTransform< PeakType ></a>
</li>
<li>tmp_path_
: <a class="el" href="classOpenMS_1_1TOPPASBase.html#ab563271358980127db4f8704bcca1dd5">TOPPASBase</a>
, <a class="el" href="classOpenMS_1_1TOPPASScene.html#a912484a8b40a4a8ff8190c589d054d5b">TOPPASScene</a>
, <a class="el" href="classOpenMS_1_1TOPPASToolVertex.html#ab563271358980127db4f8704bcca1dd5">TOPPASToolVertex</a>
</li>
<li>TMT_SIXPLEX
: <a class="el" href="classOpenMS_1_1ItraqConstants.html#a6d4d2da803a1940366d2d1c9df88a1daab2efab97bf0de95600be505f6f3f3e70">ItraqConstants</a>
</li>
<li>TMTSixPlexQuantitationMethod()
: <a class="el" href="classOpenMS_1_1TMTSixPlexQuantitationMethod.html#a9b01cd33587441862c057364aa77b891">TMTSixPlexQuantitationMethod</a>
</li>
<li>to_
: <a class="el" href="classOpenMS_1_1MascotRemoteQuery.html#aaa8978b6d2fef75a53cd1a9a3e87c927">MascotRemoteQuery</a>
, <a class="el" href="classOpenMS_1_1TOPPASEdge.html#a6b48ce70d25eaffb0db4c91f961ea793">TOPPASEdge</a>
</li>
<li>toBool()
: <a class="el" href="classOpenMS_1_1DataValue.html#a15274045457dcf54a03e7b417c9e7644">DataValue</a>
</li>
<li>toCellString()
: <a class="el" href="classOpenMS_1_1MzTabNullAbleInterface.html#a5a32ae24f980f144c720679c88f5978d">MzTabNullAbleInterface</a>
, <a class="el" href="classOpenMS_1_1MzTabDouble.html#a7c3fe15a811e327e4d866344454e423e">MzTabDouble</a>
, <a class="el" href="classOpenMS_1_1MzTabDoubleList.html#a7c3fe15a811e327e4d866344454e423e">MzTabDoubleList</a>
, <a class="el" href="classOpenMS_1_1MzTabInteger.html#a7c3fe15a811e327e4d866344454e423e">MzTabInteger</a>
, <a class="el" href="classOpenMS_1_1MzTabBoolean.html#a7c3fe15a811e327e4d866344454e423e">MzTabBoolean</a>
, <a class="el" href="classOpenMS_1_1MzTabString.html#a7c3fe15a811e327e4d866344454e423e">MzTabString</a>
, <a class="el" href="classOpenMS_1_1MzTabParameter.html#a7c3fe15a811e327e4d866344454e423e">MzTabParameter</a>
, <a class="el" href="classOpenMS_1_1MzTabParameterList.html#a7c3fe15a811e327e4d866344454e423e">MzTabParameterList</a>
, <a class="el" href="classOpenMS_1_1MzTabStringList.html#a7c3fe15a811e327e4d866344454e423e">MzTabStringList</a>
, <a class="el" href="structOpenMS_1_1MzTabModification.html#a7c3fe15a811e327e4d866344454e423e">MzTabModification</a>
, <a class="el" href="classOpenMS_1_1MzTabModificationList.html#a7c3fe15a811e327e4d866344454e423e">MzTabModificationList</a>
, <a class="el" href="classOpenMS_1_1MzTabSpectraRef.html#a7c3fe15a811e327e4d866344454e423e">MzTabSpectraRef</a>
</li>
<li>toChar()
: <a class="el" href="classOpenMS_1_1DataValue.html#ac471125acdc766fc6ee0bdaa56a78783">DataValue</a>
</li>
<li>toCSVString()
: <a class="el" href="structOpenMS_1_1QcMLFile_1_1Attachment.html#a4f2cdee0968b2e22f919b2c4a4b3f78b">QcMLFile::Attachment</a>
</li>
<li>today()
: <a class="el" href="classOpenMS_1_1Date.html#a5e7dd80f5e87960a0781c82347fb686b">Date</a>
</li>
<li>toDouble()
: <a class="el" href="classOpenMS_1_1String.html#ad922a0a88985be1114341e4b83120414">String</a>
</li>
<li>toExpandedString()
: <a class="el" href="classOpenMS_1_1MassDecomposition.html#a5286d87687a64935681b624983291c19">MassDecomposition</a>
</li>
<li>TOF
: <a class="el" href="classOpenMS_1_1MassAnalyzer.html#a134230547dd6de10b20f6904d9422ec3ac18e0fdb830eeb3a7f657a75000744db">MassAnalyzer</a>
</li>
<li>TOF_
: <a class="el" href="classOpenMS_1_1MassAnalyzerVisualizer.html#a2fa5ae592c6714ce11dc93463c02a0f4">MassAnalyzerVisualizer</a>
</li>
<li>TOF_total_path_length_
: <a class="el" href="classOpenMS_1_1MassAnalyzer.html#aaceb7ce7f40d45a9ded85224fda1b956">MassAnalyzer</a>
</li>
<li>TOFCalibration()
: <a class="el" href="classOpenMS_1_1TOFCalibration.html#a66645947ccfb034b69a42de9cfe6d771">TOFCalibration</a>
</li>
<li>toFloat()
: <a class="el" href="classOpenMS_1_1String.html#ab8c91df5793ed8e569ea57a792203441">String</a>
</li>
<li>toggleAdvancedMode()
: <a class="el" href="classOpenMS_1_1ParamEditor.html#a9672abebc9155395f9fb3f353c9e690d">ParamEditor</a>
</li>
<li>toggleAxisLegends()
: <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a13a560175b6fad3bae109cc0432b4e00">TOPPViewBase</a>
</li>
<li>toggleBreakpoint()
: <a class="el" href="classOpenMS_1_1TOPPASToolVertex.html#a16466e8d2ea563cdc0674e001c6f7c7a">TOPPASToolVertex</a>
</li>
<li>toggleGridLines()
: <a class="el" href="classOpenMS_1_1TOPPViewBase.html#acd65167f04254e1b970e79347cd632a3">TOPPViewBase</a>
</li>
<li>toggleMirrorView()
: <a class="el" href="classOpenMS_1_1Spectrum1DWidget.html#a711f45bc86113cefab1b1570c1251ca1">Spectrum1DWidget</a>
</li>
<li>toggleProjections()
: <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a3f700de012a98604e90482edc6bcec8c">TOPPViewBase</a>
, <a class="el" href="classOpenMS_1_1Spectrum2DCanvas.html#a3f700de012a98604e90482edc6bcec8c">Spectrum2DCanvas</a>
, <a class="el" href="classOpenMS_1_1Spectrum2DWidget.html#a3f700de012a98604e90482edc6bcec8c">Spectrum2DWidget</a>
</li>
<li>toGslMatrix()
: <a class="el" href="classOpenMS_1_1Matrix.html#a4e31cd1f94c4407cf886bed2e1178526">Matrix< Value ></a>
</li>
<li>toInt()
: <a class="el" href="classOpenMS_1_1String.html#a28f849a39a6e1a02a891d9e7e7f6eb79">String</a>
</li>
<li>tol_
: <a class="el" href="classOpenMS_1_1EdwardsLippertIterator.html#ad71c965ded7781aca71019c3873bc535">EdwardsLippertIterator</a>
, <a class="el" href="classOpenMS_1_1SuffixArraySeqan.html#ad71c965ded7781aca71019c3873bc535">SuffixArraySeqan</a>
, <a class="el" href="classOpenMS_1_1SuffixArrayTrypticCompressed.html#ad71c965ded7781aca71019c3873bc535">SuffixArrayTrypticCompressed</a>
</li>
<li>tolerance
: <a class="el" href="structOpenMS_1_1EqualInTolerance.html#a9b8018f89720e70d42d06733c7019994">EqualInTolerance< CompareType ></a>
</li>
<li>tolerance_mz_
: <a class="el" href="classOpenMS_1_1TwoDOptimization.html#acbc4c0b42c88614c321ed3a8e4075c08">TwoDOptimization</a>
</li>
<li>tolerance_stdev_box_
: <a class="el" href="classOpenMS_1_1Fitter1D.html#a550aafc7c40f4722708edca5488f5b6b">Fitter1D</a>
, <a class="el" href="classOpenMS_1_1ModelFitter.html#a550aafc7c40f4722708edca5488f5b6b">ModelFitter< PeakType, FeatureType ></a>
</li>
<li>toleranceMZ_
: <a class="el" href="classOpenMS_1_1SuperHirnParameters.html#a23dc5bc924a01a10afcb2345c08e017a">SuperHirnParameters</a>
</li>
<li>toLower()
: <a class="el" href="classOpenMS_1_1String.html#a8fd5f3c864af3d60885cc09888dd18d3">String</a>
, <a class="el" href="classOpenMS_1_1StringList.html#adb7e069688aa84f251961a1e7714e355">StringList</a>
</li>
<li>too_few_peptides
: <a class="el" href="structOpenMS_1_1PeptideAndProteinQuant_1_1Statistics.html#ae63f65c79e6263ccc6ab72b483d553cf">PeptideAndProteinQuant::Statistics</a>
</li>
<li>tool
: <a class="el" href="classOpenMS_1_1TOPPViewBase.html#ac34c7406fe753dcf78be26200866401a">TOPPViewBase</a>
</li>
<li>tool_bar_
: <a class="el" href="classOpenMS_1_1IDEvaluationBase.html#ac95bf715314bd478482ad36021db3e7c">IDEvaluationBase</a>
, <a class="el" href="classOpenMS_1_1TOPPASBase.html#ac95bf715314bd478482ad36021db3e7c">TOPPASBase</a>
, <a class="el" href="classOpenMS_1_1TOPPViewBase.html#ac95bf715314bd478482ad36021db3e7c">TOPPViewBase</a>
</li>
<li>tool_bar_1d_
: <a class="el" href="classOpenMS_1_1TOPPViewBase.html#ae86d3bc3c8cb94c4680ab05015d97024">TOPPViewBase</a>
</li>
<li>tool_bar_2d_cons_
: <a class="el" href="classOpenMS_1_1TOPPViewBase.html#acca24850ed62bee2775989634297f356">TOPPViewBase</a>
</li>
<li>tool_bar_2d_feat_
: <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a5d3461e2bb6b1e683ce33c65fde5ec2b">TOPPViewBase</a>
</li>
<li>tool_bar_2d_ident_
: <a class="el" href="classOpenMS_1_1TOPPViewBase.html#aea31f700a839e0b9fcabbe4e17947c87">TOPPViewBase</a>
</li>
<li>tool_bar_2d_peak_
: <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a9c027e7a63023445f066e7e45c6a1f2e">TOPPViewBase</a>
</li>
<li>TOOL_CRASH
: <a class="el" href="classOpenMS_1_1TOPPASToolVertex.html#abbf282fae8bd1b25f3ca8154fc76f4e3a0adda8b3aab0a5611ef68bf44a970fa4">TOPPASToolVertex</a>
</li>
<li>tool_desc_
: <a class="el" href="classOpenMS_1_1ToolsDialog.html#a968744d17948236a4e2d60152a97e345">ToolsDialog</a>
</li>
<li>tool_description_
: <a class="el" href="classOpenMS_1_1TOPPBase.html#a149061aab047b425371d4079f4a325f4">TOPPBase</a>
</li>
<li>tool_name_
: <a class="el" href="classOpenMS_1_1TOPPBase.html#a710b3279a901758436518187692fb0af">TOPPBase</a>
, <a class="el" href="classOpenMS_1_1TOPPASToolConfigDialog.html#aa24782603ff8c36455ceb9bda2e37c54">TOPPASToolConfigDialog</a>
</li>
<li>TOOL_READY
: <a class="el" href="classOpenMS_1_1TOPPASToolVertex.html#abbf282fae8bd1b25f3ca8154fc76f4e3ace2c75e2a663d1623b9e384ed710fea8">TOPPASToolVertex</a>
</li>
<li>tool_ready_
: <a class="el" href="classOpenMS_1_1TOPPASToolVertex.html#a0ebddf22b9fb6da9b5c4ee736c596a7f">TOPPASToolVertex</a>
</li>
<li>TOOL_RUNNING
: <a class="el" href="classOpenMS_1_1TOPPASToolVertex.html#abbf282fae8bd1b25f3ca8154fc76f4e3ae85c17a2c672f8c204903ac5f171ec58">TOPPASToolVertex</a>
</li>
<li>TOOL_SCHEDULED
: <a class="el" href="classOpenMS_1_1TOPPASToolVertex.html#abbf282fae8bd1b25f3ca8154fc76f4e3ac64d132d6e886f66f564b31a4345d473">TOPPASToolVertex</a>
</li>
<li>TOOL_SUCCESS
: <a class="el" href="classOpenMS_1_1TOPPASToolVertex.html#abbf282fae8bd1b25f3ca8154fc76f4e3a56899cade06659cbffd75f7a5d1eba85">TOPPASToolVertex</a>
</li>
<li>tool_type_
: <a class="el" href="classOpenMS_1_1TOPPASToolConfigDialog.html#abe0b9fbf070b520da7d349b07452f0ff">TOPPASToolConfigDialog</a>
</li>
<li>toolCrashed()
: <a class="el" href="classOpenMS_1_1TOPPASBase.html#af215168f972a65183fa5819430870d4e">TOPPASBase</a>
, <a class="el" href="classOpenMS_1_1TOPPASToolVertex.html#af215168f972a65183fa5819430870d4e">TOPPASToolVertex</a>
</li>
<li>toolCrashedSlot()
: <a class="el" href="classOpenMS_1_1TOPPASToolVertex.html#a681246fcf9be1763d61b40ea79cec8c8">TOPPASToolVertex</a>
</li>
<li>ToolDescription()
: <a class="el" href="structOpenMS_1_1Internal_1_1ToolDescription.html#a815224568b6128a11eff5ac1b456bd0f">ToolDescription</a>
</li>
<li>ToolDescriptionFile()
: <a class="el" href="classOpenMS_1_1ToolDescriptionFile.html#a21a39e0df5ed757d6a354ff2d8af5ab5">ToolDescriptionFile</a>
</li>
<li>ToolDescriptionHandler()
: <a class="el" href="classOpenMS_1_1Internal_1_1ToolDescriptionHandler.html#a2580660f3fdd105384b7ba3b11b23b28">ToolDescriptionHandler</a>
</li>
<li>ToolDescriptionInternal()
: <a class="el" href="structOpenMS_1_1Internal_1_1ToolDescriptionInternal.html#a6345aabfc4ac5e4a6dc475c80d5bedb2">ToolDescriptionInternal</a>
</li>
<li>toolDroppedOnWidget()
: <a class="el" href="classOpenMS_1_1TOPPASWidget.html#a8caaadd1a8b8e10af7fabdc6f0290f83">TOPPASWidget</a>
</li>
<li>toolFailed()
: <a class="el" href="classOpenMS_1_1TOPPASBase.html#aec04230b69cc4bcb9edbc41b80baa55f">TOPPASBase</a>
, <a class="el" href="classOpenMS_1_1TOPPASToolVertex.html#aef354889ed0cbd0bc07e5160def141db">TOPPASToolVertex</a>
</li>
<li>toolFailedSlot()
: <a class="el" href="classOpenMS_1_1TOPPASToolVertex.html#a58962a513884590f0c6a812086b24da4">TOPPASToolVertex</a>
</li>
<li>toolFinished()
: <a class="el" href="classOpenMS_1_1TOPPASBase.html#a5999feb381958474518086dafd44c99e">TOPPASBase</a>
, <a class="el" href="classOpenMS_1_1TOPPASToolVertex.html#a5999feb381958474518086dafd44c99e">TOPPASToolVertex</a>
</li>
<li>toolFinishedSlot()
: <a class="el" href="classOpenMS_1_1TOPPASToolVertex.html#a6b42d89b49c6a63ad2680815ad137149">TOPPASToolVertex</a>
</li>
<li>toolName_()
: <a class="el" href="classOpenMS_1_1TOPPBase.html#a99657ef10c0478aff846bd9a2ce91ede">TOPPBase</a>
</li>
<li>toolname_
: <a class="el" href="classOpenMS_1_1DocumentIDTagger.html#a4fb4db0bd3d688c678693d825fe0147f">DocumentIDTagger</a>
</li>
<li>toolnameWithWhitespacesForFancyWordWrapping_()
: <a class="el" href="classOpenMS_1_1TOPPASToolVertex.html#ab2264462148077c9f71f579422452638">TOPPASToolVertex</a>
</li>
<li>tools_combo_
: <a class="el" href="classOpenMS_1_1ToolsDialog.html#afacea6296bacc40d98599fb1a5be3555">ToolsDialog</a>
</li>
<li>tools_external_
: <a class="el" href="classOpenMS_1_1ToolHandler.html#a633543f731e1f44363c7918e5bfbb21d">ToolHandler</a>
</li>
<li>tools_external_loaded_
: <a class="el" href="classOpenMS_1_1ToolHandler.html#aa606e5056ee989c461b7df20e5ebf52e">ToolHandler</a>
</li>
<li>tools_internal_
: <a class="el" href="classOpenMS_1_1ToolHandler.html#a524bdb25a9a324abf3ec0b10ac194470">ToolHandler</a>
</li>
<li>tools_internal_loaded_
: <a class="el" href="classOpenMS_1_1ToolHandler.html#a3fc72720c86b8979ac415ee61f00e322">ToolHandler</a>
</li>
<li>tools_tree_view_
: <a class="el" href="classOpenMS_1_1TOPPASBase.html#a073586e47ea2b5c6d8970aba99a01fb6">TOPPASBase</a>
</li>
<li>toolScheduledSlot()
: <a class="el" href="classOpenMS_1_1TOPPASToolVertex.html#a828489f6c4aef1d862e7ac7ae532caef">TOPPASToolVertex</a>
</li>
<li>ToolsDialog()
: <a class="el" href="classOpenMS_1_1ToolsDialog.html#a62ff937fb82305d60b8b6ba96ffada9f">ToolsDialog</a>
</li>
<li>toolStarted()
: <a class="el" href="classOpenMS_1_1TOPPASBase.html#ad313b7a2f2e778ba2f91c2fa0447f4ea">TOPPASBase</a>
, <a class="el" href="classOpenMS_1_1TOPPASToolVertex.html#ad313b7a2f2e778ba2f91c2fa0447f4ea">TOPPASToolVertex</a>
</li>
<li>toolStartedSlot()
: <a class="el" href="classOpenMS_1_1TOPPASToolVertex.html#a46f41f64e2688ff2948a8decdbe22d21">TOPPASToolVertex</a>
</li>
<li>TOOLSTATUS
: <a class="el" href="classOpenMS_1_1TOPPASToolVertex.html#abbf282fae8bd1b25f3ca8154fc76f4e3">TOPPASToolVertex</a>
</li>
<li>TOOLSTATUS_SIZE
: <a class="el" href="classOpenMS_1_1TOPPASToolVertex.html#abbf282fae8bd1b25f3ca8154fc76f4e3a463fe315d09df3d92883c1192f1a730d">TOPPASToolVertex</a>
</li>
<li>TOP
: <a class="el" href="classOpenMS_1_1AxisPainter.html#acdfaca60ec19c0265bac2692d7982726a0ad44897a70fba309c24a5b6007de3e3">AxisPainter</a>
</li>
<li>topo_nr_
: <a class="el" href="classOpenMS_1_1TOPPASVertex.html#ae9caa987527ca966fde4c3b2dd10c0ac">TOPPASVertex</a>
</li>
<li>topo_sort_marked_
: <a class="el" href="classOpenMS_1_1TOPPASVertex.html#acfeb5b602cf2510821173884bd95b9b1">TOPPASVertex</a>
</li>
<li>topoSort()
: <a class="el" href="classOpenMS_1_1TOPPASScene.html#acd8d144e5dee3b237e53fa849bf92b2a">TOPPASScene</a>
</li>
<li>topp_
: <a class="el" href="classOpenMS_1_1TOPPViewBase.html#ad07bc7cc1cf6eea9b2403892f7aa95ce">TOPPViewBase</a>
</li>
<li>topp_ini_file_
: <a class="el" href="classOpenMS_1_1TOPPBase.html#a3857c6970f5c49182a97916a1aa2d555">TOPPBase</a>
</li>
<li>topp_processes_queue_
: <a class="el" href="classOpenMS_1_1TOPPASScene.html#a3f78ed1db1460a2838500201ac25518e">TOPPASScene</a>
</li>
<li>TOPPAS
: <a class="el" href="structOpenMS_1_1FileTypes.html#a1d1cfd8ffb84e947f82999c682b666a7ac3c9fdd077f68cc2ba3d489ffe438875">FileTypes</a>
</li>
<li>TOPPASBase()
: <a class="el" href="classOpenMS_1_1TOPPASBase.html#a0d556823d1bc2537b662aa979b184911">TOPPASBase</a>
</li>
<li>TOPPASEdge()
: <a class="el" href="classOpenMS_1_1TOPPASEdge.html#a93c63a2c68bd4dc8e318b62c79e52a05">TOPPASEdge</a>
</li>
<li>toppasFileDownloaded_()
: <a class="el" href="classOpenMS_1_1TOPPASBase.html#a958f0ed6befa5fcb2afe3228b0b1680a">TOPPASBase</a>
</li>
<li>TOPPASInputFileDialog()
: <a class="el" href="classOpenMS_1_1TOPPASInputFileDialog.html#a0a667594f2391dd485f0a618a11d8ff9">TOPPASInputFileDialog</a>
</li>
<li>TOPPASInputFileListVertex()
: <a class="el" href="classOpenMS_1_1TOPPASInputFileListVertex.html#a16b5e588848d0d7c24e0f895a8906bcd">TOPPASInputFileListVertex</a>
</li>
<li>TOPPASInputFilesDialog()
: <a class="el" href="classOpenMS_1_1TOPPASInputFilesDialog.html#a75224030a14745a10205fbfb71f2bf65">TOPPASInputFilesDialog</a>
</li>
<li>TOPPASIOMappingDialog()
: <a class="el" href="classOpenMS_1_1TOPPASIOMappingDialog.html#aa1cf1bfbe18e803bb4912b6bbe4fe185">TOPPASIOMappingDialog</a>
</li>
<li>TOPPASLogWindow()
: <a class="el" href="classOpenMS_1_1TOPPASLogWindow.html#a6ace29f39e2fa534d55c808a460df155">TOPPASLogWindow</a>
</li>
<li>TOPPASMergerVertex()
: <a class="el" href="classOpenMS_1_1TOPPASMergerVertex.html#a9b9765a113fac20cbeb569d3cf593b6e">TOPPASMergerVertex</a>
</li>
<li>TOPPASOutputFileListVertex()
: <a class="el" href="classOpenMS_1_1TOPPASOutputFileListVertex.html#ab310830bed6d8bd1b865274f3de7ad76">TOPPASOutputFileListVertex</a>
</li>
<li>TOPPASOutputFilesDialog()
: <a class="el" href="classOpenMS_1_1TOPPASOutputFilesDialog.html#ab1c1fbfd529ba7585a7128ebe1e2798e">TOPPASOutputFilesDialog</a>
</li>
<li>TOPPASResource()
: <a class="el" href="classOpenMS_1_1TOPPASResource.html#a274f7f94b456bd742ad823c845c460c3">TOPPASResource</a>
</li>
<li>TOPPASResources()
: <a class="el" href="classOpenMS_1_1TOPPASResources.html#aabe69143cf0d84daf0aeb0eaebc76ca5">TOPPASResources</a>
</li>
<li>TOPPASScene()
: <a class="el" href="classOpenMS_1_1TOPPASScene.html#ae947d90b90116f2b91f1f69e4b448c2c">TOPPASScene</a>
</li>
<li>TOPPASTabBar()
: <a class="el" href="classOpenMS_1_1TOPPASTabBar.html#af655140b51c1986900e0eb0fda6bcba6">TOPPASTabBar</a>
</li>
<li>TOPPASToolConfigDialog()
: <a class="el" href="classOpenMS_1_1TOPPASToolConfigDialog.html#a9508df34580f9f0cec9fa574c36d9d62">TOPPASToolConfigDialog</a>
</li>
<li>TOPPASToolVertex()
: <a class="el" href="classOpenMS_1_1TOPPASToolVertex.html#a7df59fa3adb8a83b6eb6c7167d497307">TOPPASToolVertex</a>
</li>
<li>TOPPASTreeView()
: <a class="el" href="classOpenMS_1_1TOPPASTreeView.html#a1c0e8bf9c807b3c94c50caf6c86a50fa">TOPPASTreeView</a>
</li>
<li>TOPPASVertex()
: <a class="el" href="classOpenMS_1_1TOPPASVertex.html#a1299015bebebeb1075a18b938867c2ff">TOPPASVertex</a>
</li>
<li>TOPPASVertexNameDialog()
: <a class="el" href="classOpenMS_1_1TOPPASVertexNameDialog.html#a6912388af4c67a3e0f15e1194eec6d90">TOPPASVertexNameDialog</a>
</li>
<li>TOPPASWidget()
: <a class="el" href="classOpenMS_1_1TOPPASWidget.html#abb941982d32ab6a55604010eb4aab4c7">TOPPASWidget</a>
</li>
<li>TOPPBase
: <a class="el" href="classOpenMS_1_1File.html#a8bf218d5d4a22065921a50f069a7746a">File</a>
, <a class="el" href="classOpenMS_1_1TOPPBase.html#ab79a6a5e2a64187383b8719a803dfa26">TOPPBase</a>
</li>
<li>toppOutputReady()
: <a class="el" href="classOpenMS_1_1TOPPASToolVertex.html#a0228e0412531c085a8775050103f5b36">TOPPASToolVertex</a>
</li>
<li>TOPPProcess()
: <a class="el" href="structOpenMS_1_1TOPPASScene_1_1TOPPProcess.html#af181393a96252f2adba728112374972b">TOPPASScene::TOPPProcess</a>
</li>
<li>TOPPRNPxl()
: <a class="el" href="classTOPPRNPxl.html#abf14ac0ef5097d17e6a377ae89b31772">TOPPRNPxl</a>
</li>
<li>TOPPViewBase()
: <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a565c5faad2e89b819c32e1aa57cb615a">TOPPViewBase</a>
</li>
<li>TOPPViewIdentificationViewBehavior()
: <a class="el" href="classOpenMS_1_1TOPPViewIdentificationViewBehavior.html#a44daf8bca1aabff5a057dfb14e6e9720">TOPPViewIdentificationViewBehavior</a>
</li>
<li>TOPPViewOpenDialog()
: <a class="el" href="classOpenMS_1_1TOPPViewOpenDialog.html#a72daa60b2ebc2d653967bee87fff3e90">TOPPViewOpenDialog</a>
</li>
<li>TOPPViewPrefDialog()
: <a class="el" href="classOpenMS_1_1Internal_1_1TOPPViewPrefDialog.html#a13669b4995b741e85bbb63e412efa6db">TOPPViewPrefDialog</a>
</li>
<li>TOPPViewSpectraViewBehavior()
: <a class="el" href="classOpenMS_1_1TOPPViewSpectraViewBehavior.html#ac77ca04819ab165688abd25c05cd7cd3">TOPPViewSpectraViewBehavior</a>
</li>
<li>toQString()
: <a class="el" href="classOpenMS_1_1DataValue.html#ab9244483ff324b0dbd3e89d03ee63eb2">DataValue</a>
, <a class="el" href="classOpenMS_1_1String.html#ab9244483ff324b0dbd3e89d03ee63eb2">String</a>
</li>
<li>toString()
: <a class="el" href="classOpenMS_1_1AASequence.html#a82e960f65e28ae6aba1271adbb83236e">AASequence</a>
, <a class="el" href="classOpenMS_1_1MassDecomposition.html#a82e960f65e28ae6aba1271adbb83236e">MassDecomposition</a>
, <a class="el" href="classOpenMS_1_1DataValue.html#a82e960f65e28ae6aba1271adbb83236e">DataValue</a>
, <a class="el" href="classOpenMS_1_1SuffixArraySeqan.html#ad146fa8579a5f8a876c4688cc5a68520">SuffixArraySeqan</a>
, <a class="el" href="classOpenMS_1_1SuffixArrayTrypticCompressed.html#ad146fa8579a5f8a876c4688cc5a68520">SuffixArrayTrypticCompressed</a>
, <a class="el" href="structOpenMS_1_1DataFilters_1_1DataFilter.html#a82e960f65e28ae6aba1271adbb83236e">DataFilters::DataFilter</a>
, <a class="el" href="classOpenMS_1_1StopWatch.html#a0c27029ac0b4007bdb448ac5c7d06670">StopWatch</a>
, <a class="el" href="classOpenMS_1_1MultiGradient.html#a3f23c97b6c9f2a88e1121d1c633ccafa">MultiGradient</a>
, <a class="el" href="classOpenMS_1_1SuffixArray.html#afdaf3cb169ec00377bee2cd175d8e1f8">SuffixArray</a>
</li>
<li>total_abundances
: <a class="el" href="structOpenMS_1_1PeptideAndProteinQuant_1_1PeptideData.html#a28c74e05409d9027ed5d90127eb561d7">PeptideAndProteinQuant::PeptideData</a>
, <a class="el" href="structOpenMS_1_1PeptideAndProteinQuant_1_1ProteinData.html#a28c74e05409d9027ed5d90127eb561d7">PeptideAndProteinQuant::ProteinData</a>
</li>
<li>total_features
: <a class="el" href="structOpenMS_1_1PeptideAndProteinQuant_1_1Statistics.html#a38cfee3fe8e2ee26fd7d6df159f79545">PeptideAndProteinQuant::Statistics</a>
</li>
<li>total_gradient_time_
: <a class="el" href="classOpenMS_1_1RTSimulation.html#aad41a72aba947f4f94385e180f304ea0">RTSimulation</a>
</li>
<li>total_intensity_
: <a class="el" href="classOpenMS_1_1FeatureFindingMetabo.html#a7626c9dab0ef553b73a0eec6833ff672">FeatureFindingMetabo</a>
, <a class="el" href="classOpenMS_1_1LmaIsotopeFitter1D.html#a72d2d9fae58867ee024c72dc88da7652">LmaIsotopeFitter1D</a>
, <a class="el" href="classOpenMS_1_1LmaIsotopeModel.html#a72d2d9fae58867ee024c72dc88da7652">LmaIsotopeModel</a>
</li>
<li>TOTAL_ION_CURRENT_CHROMATOGRAM
: <a class="el" href="classOpenMS_1_1ChromatogramSettings.html#a68c34f5f5adf5049a53084716add11bda9761ce23aa0bea120a7d581477316953">ChromatogramSettings</a>
</li>
<li>total_nr_peaks
: <a class="el" href="structOpenMS_1_1TwoDOptimization_1_1Data.html#a9d5caa74a619fd37c7352fce078259fd">TwoDOptimization::Data</a>
</li>
<li>total_peak_area
: <a class="el" href="classOpenMS_1_1SHFeature.html#aea807d4cfb6795df87a8c18d5c002768">SHFeature</a>
</li>
<li>total_peptides
: <a class="el" href="structOpenMS_1_1PeptideAndProteinQuant_1_1Statistics.html#a9b3565ea06566c02e0a1982a8c99238f">PeptideAndProteinQuant::Statistics</a>
</li>
<li>total_size_
: <a class="el" href="classOpenMS_1_1MSExperiment.html#ab8aa658ccc7d2555975e8f90c09c211c">MSExperiment< PeakT, ChromatogramPeakT ></a>
</li>
<li>total_weight_reciprocal_
: <a class="el" href="classOpenMS_1_1FeatureDistance.html#a42bbf59694a9e5f5057c7229c3e5bc5e">FeatureDistance</a>
</li>
<li>toUnmodifiedString()
: <a class="el" href="classOpenMS_1_1AASequence.html#abdfcd8d49c1e6cfe3a808bbdfd7b526d">AASequence</a>
</li>
<li>toUpper()
: <a class="el" href="classOpenMS_1_1String.html#af4ee57bf2ee0f301dc531d48b15792a2">String</a>
, <a class="el" href="classOpenMS_1_1StringList.html#aced434f03c0594b74bcd7453184b95a3">StringList</a>
</li>
<li>toXMLString()
: <a class="el" href="structOpenMS_1_1ControlledVocabulary_1_1CVTerm.html#a6f9a1e168f4966c700c2162f380cb812">ControlledVocabulary::CVTerm</a>
, <a class="el" href="structOpenMS_1_1QcMLFile_1_1Attachment.html#a7e06178aaf0f66f210121ee2414daa5f">QcMLFile::Attachment</a>
, <a class="el" href="structOpenMS_1_1QcMLFile_1_1QualityParameter.html#a7e06178aaf0f66f210121ee2414daa5f">QcMLFile::QualityParameter</a>
</li>
<li>TR
: <a class="el" href="structOpenMS_1_1MS1Signal.html#af6d5ab3629ea17ec17a1733f29f8a0d9">MS1Signal</a>
, <a class="el" href="classOpenMS_1_1MS2ConsensusSpectrum.html#af6d5ab3629ea17ec17a1733f29f8a0d9">MS2ConsensusSpectrum</a>
, <a class="el" href="classOpenMS_1_1MS2Info.html#af6d5ab3629ea17ec17a1733f29f8a0d9">MS2Info</a>
, <a class="el" href="classOpenMS_1_1MSPeak.html#af6d5ab3629ea17ec17a1733f29f8a0d9">MSPeak</a>
, <a class="el" href="classOpenMS_1_1SHFeature.html#af6d5ab3629ea17ec17a1733f29f8a0d9">SHFeature</a>
, <a class="el" href="classOpenMS_1_1MS2Fragment.html#af6d5ab3629ea17ec17a1733f29f8a0d9">MS2Fragment</a>
</li>
<li>tr_
: <a class="el" href="classOpenMS_1_1CentroidPeak.html#a8b4c2f780860673b62b24b274b243c80">CentroidPeak</a>
</li>
<li>TR_APEX
: <a class="el" href="classOpenMS_1_1SHFeature.html#aa239132694c57d4a11e49a5f4d3d25a4">SHFeature</a>
</li>
<li>TR_END
: <a class="el" href="classOpenMS_1_1SHFeature.html#ab059e21bb38af0cb61c0e07e69f7e378">SHFeature</a>
</li>
<li>tr_gr_id_
: <a class="el" href="classOpenMS_1_1MRMTransitionGroup.html#a671c0bcfdc1474656aabe9b68ad790f6">MRMTransitionGroup< SpectrumType, TransitionType ></a>
</li>
<li>TR_START
: <a class="el" href="classOpenMS_1_1SHFeature.html#a9ca5357801eda85eaf890d09b6717549">SHFeature</a>
</li>
<li>tr_table
: <a class="el" href="structOpenMS_1_1Internal_1_1ToolExternalDetails.html#af549e496c1d9a1b7e466f8de7889ef0b">ToolExternalDetails</a>
</li>
<li>trace_
: <a class="el" href="classOpenMS_1_1Param_1_1ParamIterator.html#a660ec4ed9d13e48813502d1e5f5222b4">Param::ParamIterator</a>
</li>
<li>trace_peaks_
: <a class="el" href="classOpenMS_1_1MassTrace.html#ae97dfb84fce813336d8b4e6d9ec2f7d4">MassTrace</a>
</li>
<li>trace_termination_criterion_
: <a class="el" href="classOpenMS_1_1MassTraceDetection.html#a2f99b62df5c6a6da9c518da68dbbb8fb">MassTraceDetection</a>
</li>
<li>trace_termination_outliers_
: <a class="el" href="classOpenMS_1_1MassTraceDetection.html#a5c95c345f9f9250b9a79bc7ccffec994">MassTraceDetection</a>
</li>
<li>trace_tolerance_
: <a class="el" href="classOpenMS_1_1FeatureFinderAlgorithmPicked.html#a41848085aa61f5c00fc88e683945adf7">FeatureFinderAlgorithmPicked< PeakType, FeatureType ></a>
</li>
<li>TraceFitter()
: <a class="el" href="classOpenMS_1_1TraceFitter.html#a113c8da1eadad990ed5c5c3fbfd5c2df">TraceFitter< PeakType ></a>
</li>
<li>TraceInfo()
: <a class="el" href="structOpenMS_1_1Param_1_1ParamIterator_1_1TraceInfo.html#ac5404cb3b1480293523d339e62c77d08">Param::ParamIterator::TraceInfo</a>
</li>
<li>trafo_
: <a class="el" href="classOpenMS_1_1InternalCalibration.html#a0846853a0279b29f089c7c8d19e0ad4a">InternalCalibration</a>
</li>
<li>train()
: <a class="el" href="classOpenMS_1_1HiddenMarkovModel.html#a58a9e39b3626c1bb7e4e959b36bf43d7">HiddenMarkovModel</a>
, <a class="el" href="classOpenMS_1_1PILISNeutralLossModel.html#ae9e84b955b6d53c25372d991dc965abb">PILISNeutralLossModel</a>
, <a class="el" href="classOpenMS_1_1SVMWrapper.html#a3365dcda8b4cd7e922ad35fb78944037">SVMWrapper</a>
, <a class="el" href="classOpenMS_1_1PILISModel.html#a5f4cc62fa554b3d90f36f06fcc97c031">PILISModel</a>
</li>
<li>train_count_trans_all_
: <a class="el" href="classOpenMS_1_1HiddenMarkovModel.html#ade70e6b1e50e14bb3e346109b3bcce05">HiddenMarkovModel</a>
</li>
<li>train_emission_prob_
: <a class="el" href="classOpenMS_1_1HiddenMarkovModel.html#a644dcdf896b4537a06499262f268ae1d">HiddenMarkovModel</a>
</li>
<li>trained_trans_
: <a class="el" href="classOpenMS_1_1HiddenMarkovModel.html#a56962bf56def2e162fec62711b6479b5">HiddenMarkovModel</a>
</li>
<li>training_data_
: <a class="el" href="classOpenMS_1_1SVMWrapper.html#ad1b330c482c1bdf6d92e18db25bc1d48">SVMWrapper</a>
</li>
<li>training_problem_
: <a class="el" href="classOpenMS_1_1SVMWrapper.html#abd1afcb4f3c577ebd4412c993147c1ac">SVMWrapper</a>
</li>
<li>training_set_
: <a class="el" href="classOpenMS_1_1SVMWrapper.html#a6b3f622d152c307c8a608d5baa1c23c9">SVMWrapper</a>
</li>
<li>training_steps_count_
: <a class="el" href="classOpenMS_1_1HiddenMarkovModel.html#ab907b97329259a275d3b8ce40cde9011">HiddenMarkovModel</a>
</li>
<li>trainIons_()
: <a class="el" href="classOpenMS_1_1PILISNeutralLossModel.html#a9bec2b23acddf1665e672df198479e29">PILISNeutralLossModel</a>
</li>
<li>trainModel()
: <a class="el" href="classOpenMS_1_1SvmTheoreticalSpectrumGeneratorTrainer.html#a8358d338088e35cc6554d3bca81d3ffa">SvmTheoreticalSpectrumGeneratorTrainer</a>
</li>
<li>trainSecondaryTypes_()
: <a class="el" href="classOpenMS_1_1SvmTheoreticalSpectrumGeneratorTrainer.html#a4a967de7dce1f37e5c4370b3cb17b1ed">SvmTheoreticalSpectrumGeneratorTrainer</a>
</li>
<li>TRAML
: <a class="el" href="structOpenMS_1_1FileTypes.html#a1d1cfd8ffb84e947f82999c682b666a7a156eb0a4016596c802dd9c71fce11b8f">FileTypes</a>
</li>
<li>TraMLFile()
: <a class="el" href="classOpenMS_1_1TraMLFile.html#a92d57550825a67a05c7ce77e7714e8d5">TraMLFile</a>
</li>
<li>TraMLHandler()
: <a class="el" href="classOpenMS_1_1Internal_1_1TraMLHandler.html#a2808c61355769109bfae348dc0fa861d">TraMLHandler</a>
</li>
<li>TraMLProduct()
: <a class="el" href="structOpenMS_1_1TargetedExperimentHelper_1_1TraMLProduct.html#a231a5673a2ce1794570d0720f4d0273b">TraMLProduct</a>
</li>
<li>TraMLValidator()
: <a class="el" href="classOpenMS_1_1Internal_1_1TraMLValidator.html#a8537673cd2c83f5136f09ff2557ed333">TraMLValidator</a>
</li>
<li>trans_
: <a class="el" href="classOpenMS_1_1HiddenMarkovModel.html#a167f2afb12749c3b8e5fb56731c87541">HiddenMarkovModel</a>
</li>
<li>trans_intens_
: <a class="el" href="classOpenMS_1_1IsotopeWaveletTransform_1_1TransSpectrum.html#a92fc56a385acc7bea877d086a655fdf0">IsotopeWaveletTransform< PeakType >::TransSpectrum</a>
</li>
<li>trans_x_
: <a class="el" href="classOpenMS_1_1Spectrum3DOpenGLCanvas.html#adb1aef5b51c31fb72cc4c12f814e1ec5">Spectrum3DOpenGLCanvas</a>
</li>
<li>trans_y_
: <a class="el" href="classOpenMS_1_1Spectrum3DOpenGLCanvas.html#a83e6813d089b17754b19a52f71d75f6b">Spectrum3DOpenGLCanvas</a>
</li>
<li>transferSubelements()
: <a class="el" href="classOpenMS_1_1FeatureGroupingAlgorithm.html#a7901d219c96fec5363ebb83057f5a015">FeatureGroupingAlgorithm</a>
</li>
<li>transform()
: <a class="el" href="classOpenMS_1_1CompareFouriertransform.html#a2fe68175240da7faafa5c7e7dd3eca60">CompareFouriertransform</a>
, <a class="el" href="classOpenMS_1_1ContinuousWaveletTransformNumIntegration.html#a8019148c30ed01c9243da4c7e1579926">ContinuousWaveletTransformNumIntegration</a>
, <a class="el" href="classOpenMS_1_1SpectraSTSimilarityScore.html#ae9d9239eb98ec2a2c043472a0a4ce5cb">SpectraSTSimilarityScore</a>
</li>
<li>transform_()
: <a class="el" href="classOpenMS_1_1MapAlignmentAlgorithmSpectrumAlignment.html#a2bc102affe34d954f253f24a0f1673f4">MapAlignmentAlgorithmSpectrumAlignment</a>
</li>
<li>Transformation_()
: <a class="el" href="structOpenMS_1_1IDDecoyProbability_1_1Transformation__.html#a7975b923a34e692f60d570d07f4469e2">IDDecoyProbability::Transformation_</a>
</li>
<li>TransformationDescription()
: <a class="el" href="classOpenMS_1_1TransformationDescription.html#a6c6c5a1fe722a064d6cf2f560dd77276">TransformationDescription</a>
</li>
<li>TransformationModel()
: <a class="el" href="classOpenMS_1_1TransformationModel.html#a2b84910d6d7bd930ff4651f01616d95f">TransformationModel</a>
</li>
<li>TransformationModelBSpline()
: <a class="el" href="classOpenMS_1_1TransformationModelBSpline.html#a4d6871fcce872b92bf2abe313262f4b5">TransformationModelBSpline</a>
</li>
<li>TransformationModelInterpolated()
: <a class="el" href="classOpenMS_1_1TransformationModelInterpolated.html#aeead82ed8c139eff83e002aa41fb16fd">TransformationModelInterpolated</a>
</li>
<li>TransformationModelLinear()
: <a class="el" href="classOpenMS_1_1TransformationModelLinear.html#a21a3debb15429fd0860f74ba73b8a47e">TransformationModelLinear</a>
</li>
<li>TRANSFORMATIONXML
: <a class="el" href="structOpenMS_1_1FileTypes.html#a1d1cfd8ffb84e947f82999c682b666a7aa330296e410966000e7c84c56b20d238">FileTypes</a>
</li>
<li>TransformationXMLFile()
: <a class="el" href="classOpenMS_1_1TransformationXMLFile.html#a3d2c17a3804e81504123546fc733d430">TransformationXMLFile</a>
</li>
<li>transformConsensusMaps()
: <a class="el" href="classOpenMS_1_1MapAlignmentTransformer.html#a5401d49c941d6c9b98b241959a3e0f47">MapAlignmentTransformer</a>
</li>
<li>transformFeatureMaps()
: <a class="el" href="classOpenMS_1_1MapAlignmentTransformer.html#a1930e4a87ce6173c54ec32ef056ea192">MapAlignmentTransformer</a>
</li>
<li>transformPeakMaps()
: <a class="el" href="classOpenMS_1_1MapAlignmentTransformer.html#a4332bb43125dfc82544302b6a609e055">MapAlignmentTransformer</a>
</li>
<li>transformPeptideIdentifications()
: <a class="el" href="classOpenMS_1_1MapAlignmentTransformer.html#a91a65fd4dafd6f9925b1d28b3461a699">MapAlignmentTransformer</a>
</li>
<li>transformSingleConsensusMap()
: <a class="el" href="classOpenMS_1_1MapAlignmentTransformer.html#acdd666186583c39b89f7998c0f54e95d">MapAlignmentTransformer</a>
</li>
<li>transformSingleFeatureMap()
: <a class="el" href="classOpenMS_1_1MapAlignmentTransformer.html#aa4969c372aacb889028c6d60d432bf2b">MapAlignmentTransformer</a>
</li>
<li>transformSinglePeakMap()
: <a class="el" href="classOpenMS_1_1MapAlignmentTransformer.html#a3714dc47d42c1b17dad060c7324b6591">MapAlignmentTransformer</a>
</li>
<li>transformSinglePeptideIdentification()
: <a class="el" href="classOpenMS_1_1MapAlignmentTransformer.html#adbdb7485a51fbdfcfdd6c59a584c0a5d">MapAlignmentTransformer</a>
</li>
<li>TRANSIENTRECORDER
: <a class="el" href="classOpenMS_1_1IonDetector.html#ab0301b5c82d74538dfffc98406254e11a7caeaaac284597b2a217cbd43f8c7233">IonDetector</a>
</li>
<li>transition_map_
: <a class="el" href="classOpenMS_1_1MRMTransitionGroup.html#acc0b3447e282f67aa158ccf375fdb49e">MRMTransitionGroup< SpectrumType, TransitionType ></a>
, <a class="el" href="classOpenMS_1_1ConfidenceScoring.html#ac39ec208bc01fe7c3c42ef7b01ed6cf9">ConfidenceScoring</a>
</li>
<li>transition_name
: <a class="el" href="structOpenSwath_1_1LightTransition.html#a130ffd68cbeaaf707edc4b49856490b3">LightTransition</a>
, <a class="el" href="structOpenMS_1_1TransitionTSVReader_1_1TSVTransition.html#aa7f8bc03270c3fc58648af1eb81db860">TransitionTSVReader::TSVTransition</a>
</li>
<li>TransitionGroupMapType
: <a class="el" href="classOpenMS_1_1MRMFeatureFinderScoring.html#adc7399590e54bd7f438d16a0372803e7">MRMFeatureFinderScoring</a>
</li>
<li>TransitionGroupOpenMS()
: <a class="el" href="classOpenMS_1_1TransitionGroupOpenMS.html#abaa13e20104269f5f8809f567a69bf6a">TransitionGroupOpenMS< SpectrumT, TransitionT ></a>
</li>
<li>transitions
: <a class="el" href="structOpenSwath_1_1Peptide.html#a156078a225dd305fe94b30f818c21f05">Peptide</a>
, <a class="el" href="structOpenSwath_1_1LightTargetedExperiment.html#a156078a225dd305fe94b30f818c21f05">LightTargetedExperiment</a>
</li>
<li>transitions_
: <a class="el" href="classOpenMS_1_1MRMTransitionGroup.html#aae4cb8f58b7555960427d28f0e739298">MRMTransitionGroup< SpectrumType, TransitionType ></a>
, <a class="el" href="classOpenMS_1_1TargetedExperiment.html#abb0eb582391f4fb009828c771881496b">TargetedExperiment</a>
</li>
<li>TransitionsType
: <a class="el" href="classOpenMS_1_1MRMTransitionGroup.html#a8ac2ed3f94ba65e5b4f17e891dd4738a">MRMTransitionGroup< SpectrumType, TransitionType ></a>
</li>
<li>TransitionType
: <a class="el" href="classOpenMS_1_1DIAScoring.html#a8497becf96cdfaf51ba301262d81f126">DIAScoring</a>
, <a class="el" href="classOpenMS_1_1MRMFeatureFinderScoring.html#a8497becf96cdfaf51ba301262d81f126">MRMFeatureFinderScoring</a>
, <a class="el" href="classOpenSwath_1_1MRMScoring.html#a8497becf96cdfaf51ba301262d81f126">MRMScoring</a>
</li>
<li>TransitionVectorType
: <a class="el" href="classOpenMS_1_1TransitionTSVReader.html#a7a9324ee2f11d04b8cab4e4d9c6d750e">TransitionTSVReader</a>
, <a class="el" href="classOpenMS_1_1MRMDecoy.html#a7a9324ee2f11d04b8cab4e4d9c6d750e">MRMDecoy</a>
</li>
<li>translateBackward_()
: <a class="el" href="classOpenMS_1_1Spectrum3DCanvas.html#a03c55b237da2d11cbb86260ee006f004">Spectrum3DCanvas</a>
, <a class="el" href="classOpenMS_1_1SpectrumCanvas.html#a03c55b237da2d11cbb86260ee006f004">SpectrumCanvas</a>
, <a class="el" href="classOpenMS_1_1Spectrum2DCanvas.html#a03c55b237da2d11cbb86260ee006f004">Spectrum2DCanvas</a>
</li>
<li>translateForward_()
: <a class="el" href="classOpenMS_1_1Spectrum2DCanvas.html#a8695d0fc71d0fb96e0b61a57cacf20da">Spectrum2DCanvas</a>
, <a class="el" href="classOpenMS_1_1SpectrumCanvas.html#a8695d0fc71d0fb96e0b61a57cacf20da">SpectrumCanvas</a>
, <a class="el" href="classOpenMS_1_1Spectrum3DCanvas.html#a8695d0fc71d0fb96e0b61a57cacf20da">Spectrum3DCanvas</a>
</li>
<li>translateIsotopeMatrix()
: <a class="el" href="classOpenMS_1_1ItraqConstants.html#a0d893f462f971cf06a513ac1d4a3d12a">ItraqConstants</a>
</li>
<li>translateLeft_()
: <a class="el" href="classOpenMS_1_1Spectrum1DCanvas.html#a06a4b0bb6ee562d30e4f3c2b1144495b">Spectrum1DCanvas</a>
, <a class="el" href="classOpenMS_1_1SpectrumCanvas.html#a06a4b0bb6ee562d30e4f3c2b1144495b">SpectrumCanvas</a>
, <a class="el" href="classOpenMS_1_1Spectrum2DCanvas.html#a06a4b0bb6ee562d30e4f3c2b1144495b">Spectrum2DCanvas</a>
, <a class="el" href="classOpenMS_1_1Spectrum3DCanvas.html#a06a4b0bb6ee562d30e4f3c2b1144495b">Spectrum3DCanvas</a>
</li>
<li>translateRight_()
: <a class="el" href="classOpenMS_1_1Spectrum3DCanvas.html#afb0dc900d8e5dcd9f9d82b92fa843aad">Spectrum3DCanvas</a>
, <a class="el" href="classOpenMS_1_1Spectrum1DCanvas.html#afb0dc900d8e5dcd9f9d82b92fa843aad">Spectrum1DCanvas</a>
, <a class="el" href="classOpenMS_1_1Spectrum2DCanvas.html#afb0dc900d8e5dcd9f9d82b92fa843aad">Spectrum2DCanvas</a>
, <a class="el" href="classOpenMS_1_1SpectrumCanvas.html#afb0dc900d8e5dcd9f9d82b92fa843aad">SpectrumCanvas</a>
</li>
<li>translateVisibleArea_()
: <a class="el" href="classOpenMS_1_1Spectrum2DCanvas.html#aaffda23e00be5857028acedefeb6dd3b">Spectrum2DCanvas</a>
</li>
<li>translation_table_ref_
: <a class="el" href="classOpenMS_1_1PeptideEvidence.html#ae58fb945759fbdc7ebc3286bd191ea10">PeptideEvidence</a>
</li>
<li>TransSpectrum()
: <a class="el" href="classOpenMS_1_1IsotopeWaveletTransform_1_1TransSpectrum.html#a59d6ba42b6d033cc57667a4e7db9f283">IsotopeWaveletTransform< PeakType >::TransSpectrum</a>
</li>
<li>traversed
: <a class="el" href="structOpenMS_1_1ProteinResolver_1_1ProteinEntry.html#a5b9117518b49bf02daa5aa4f6f2b30ec">ProteinResolver::ProteinEntry</a>
, <a class="el" href="structOpenMS_1_1ProteinResolver_1_1PeptideEntry.html#a5b9117518b49bf02daa5aa4f6f2b30ec">ProteinResolver::PeptideEntry</a>
</li>
<li>traversPeptide_()
: <a class="el" href="classOpenMS_1_1ProteinResolver.html#a472d17d35d22e1586b78cd5c83f4a29d">ProteinResolver</a>
</li>
<li>traversProtein_()
: <a class="el" href="classOpenMS_1_1ProteinResolver.html#aa71757b8d35bb32d527f3ad93c7df491">ProteinResolver</a>
</li>
<li>trCoord_
: <a class="el" href="classOpenMS_1_1BackgroundIntensityBin.html#a1f30940bff6070f13fb9d4a5e0c899ab">BackgroundIntensityBin</a>
</li>
<li>treatmentcomment_
: <a class="el" href="classOpenMS_1_1DigestionVisualizer.html#a0a5493956464425854f43011ed5cc2e3">DigestionVisualizer</a>
, <a class="el" href="classOpenMS_1_1TaggingVisualizer.html#a0a5493956464425854f43011ed5cc2e3">TaggingVisualizer</a>
, <a class="el" href="classOpenMS_1_1ModificationVisualizer.html#a0a5493956464425854f43011ed5cc2e3">ModificationVisualizer</a>
</li>
<li>treatments_
: <a class="el" href="classOpenMS_1_1Sample.html#ac3a2ba94d4a60fcd04e38f9f4454ce49">Sample</a>
</li>
<li>treatmenttype_
: <a class="el" href="classOpenMS_1_1TaggingVisualizer.html#a61f0734e95805494d5baeb0da3a4ee51">TaggingVisualizer</a>
, <a class="el" href="classOpenMS_1_1DigestionVisualizer.html#a61f0734e95805494d5baeb0da3a4ee51">DigestionVisualizer</a>
, <a class="el" href="classOpenMS_1_1ModificationVisualizer.html#a61f0734e95805494d5baeb0da3a4ee51">ModificationVisualizer</a>
</li>
<li>tree2Cluster_()
: <a class="el" href="classOpenMS_1_1HierarchicalClustering.html#a63b6200a7fc27e78c5fd64dc16923b2f">HierarchicalClustering< PointRef ></a>
</li>
<li>tree2Points_()
: <a class="el" href="classOpenMS_1_1HierarchicalClustering.html#a50e764110bc4e32dcbd58fbd32f8fce9">HierarchicalClustering< PointRef ></a>
</li>
<li>tree_
: <a class="el" href="classOpenMS_1_1ParamEditor.html#a329c90a5fa415b1bc1cd24ccc4284373">ParamEditor</a>
</li>
<li>tree_id_
: <a class="el" href="classOpenMS_1_1ProteinIdentificationVisualizer.html#a7ea242712edadb904de24ae6efa4e8e6">ProteinIdentificationVisualizer</a>
, <a class="el" href="classOpenMS_1_1PeptideIdentificationVisualizer.html#a7ea242712edadb904de24ae6efa4e8e6">PeptideIdentificationVisualizer</a>
</li>
<li>TreeDistance()
: <a class="el" href="classOpenMS_1_1HierarchicalClustering_1_1TreeDistance.html#a09855874d440ddaa04eeb421f95bb00b">HierarchicalClustering< PointRef >::TreeDistance</a>
</li>
<li>treeDistance_()
: <a class="el" href="classOpenMS_1_1HierarchicalClustering.html#a1aa9c03ec423a9d0ad15b07fd018084e">HierarchicalClustering< PointRef ></a>
</li>
<li>TreeDistanceQueue
: <a class="el" href="classOpenMS_1_1HierarchicalClustering.html#a13223af2ada77cbe1d32bda15c24476d">HierarchicalClustering< PointRef ></a>
</li>
<li>TreeNode()
: <a class="el" href="classOpenMS_1_1HierarchicalClustering_1_1TreeNode.html#a30663b19f9dbd92eaf0fbdf5be44f49e">HierarchicalClustering< PointRef >::TreeNode</a>
</li>
<li>treeview_
: <a class="el" href="classOpenMS_1_1MetaDataBrowser.html#a81c4959c4889db3233d8c6687c2c6956">MetaDataBrowser</a>
</li>
<li>trEnd
: <a class="el" href="classOpenMS_1_1MS2Fragment.html#a390ce6b825a2580badce7d0103ea1e83">MS2Fragment</a>
</li>
<li>trgroup_
: <a class="el" href="classOpenMS_1_1TransitionGroupOpenMS.html#a853b6412a4f65c2c9f4781da007d6cfe">TransitionGroupOpenMS< SpectrumT, TransitionT ></a>
</li>
<li>tricube_()
: <a class="el" href="classOpenMS_1_1LowessSmoothing.html#a6b65dd5d94b1b4d35be849fe2677b865">LowessSmoothing</a>
</li>
<li>trie_db_pos_length_
: <a class="el" href="classOpenMS_1_1InspectOutfile.html#a2d85713d0b31835bf704e73f1a51a282">InspectOutfile</a>
</li>
<li>trie_delimiter_
: <a class="el" href="classOpenMS_1_1InspectOutfile.html#ad72537c229548eb9b74088eb3ae88ee0">InspectOutfile</a>
</li>
<li>trim()
: <a class="el" href="classOpenMS_1_1String.html#a86864c88ee12eb322f1645f238c1dbe5">String</a>
</li>
<li>trim_right_cutoff_
: <a class="el" href="classOpenMS_1_1LmaIsotopeModel.html#adafb3217397dc0e12a45794ce45c8c94">LmaIsotopeModel</a>
, <a class="el" href="classOpenMS_1_1ExtendedIsotopeModel.html#adafb3217397dc0e12a45794ce45c8c94">ExtendedIsotopeModel</a>
, <a class="el" href="classOpenMS_1_1IsotopeModel.html#adafb3217397dc0e12a45794ce45c8c94">IsotopeModel</a>
, <a class="el" href="classOpenMS_1_1LmaIsotopeFitter1D.html#adafb3217397dc0e12a45794ce45c8c94">LmaIsotopeFitter1D</a>
</li>
<li>trimLeft()
: <a class="el" href="classOpenMS_1_1IsotopeDistribution.html#adf5dffb508ec1b791c73f990ff92a3dd">IsotopeDistribution</a>
</li>
<li>trimmed_left
: <a class="el" href="structOpenMS_1_1FeatureFinderAlgorithmPickedHelperStructs_1_1TheoreticalIsotopePattern.html#abe90dc4ba735b87228bfe913b490f9f2">FeatureFinderAlgorithmPickedHelperStructs::TheoreticalIsotopePattern</a>
</li>
<li>trimRight()
: <a class="el" href="classOpenMS_1_1IsotopeDistribution.html#a055e732ad7e3eed9cce0d279ae7af3a6">IsotopeDistribution</a>
</li>
<li>trStart
: <a class="el" href="classOpenMS_1_1MS2Fragment.html#a4b463620f6b640d3fcfbde846db2e0fd">MS2Fragment</a>
</li>
<li>trTol_
: <a class="el" href="classOpenMS_1_1SuperHirnParameters.html#a5fd585ff3f3bf92900bce7de380de3f5">SuperHirnParameters</a>
</li>
<li>TRYPSIN
: <a class="el" href="classOpenMS_1_1ProteinIdentification.html#ac1976fd756a09ae4e26fe6b32fcb396caa87783975563314a167c39f08f065bfd">ProteinIdentification</a>
</li>
<li>tryptic_only_
: <a class="el" href="classOpenMS_1_1CompNovoIdentificationBase.html#a269e179e59449e35188ff860d9b17cc2">CompNovoIdentificationBase</a>
</li>
<li>TrypticIterator()
: <a class="el" href="classOpenMS_1_1TrypticIterator.html#a9217463abdcc5f4d48f8849a7cd72787">TrypticIterator</a>
</li>
<li>tsg_
: <a class="el" href="classOpenMS_1_1PILISModel.html#ac889eab4b469ef0c20a8dea67a9943bf">PILISModel</a>
</li>
<li>TSP
: <a class="el" href="classOpenMS_1_1IonSource.html#aa1f350d16338b42e2384db2e5aa4a3f4ad323cfa7366f7dba9c4af8249a14cff1">IonSource</a>
</li>
<li>TSV
: <a class="el" href="structOpenMS_1_1FileTypes.html#a1d1cfd8ffb84e947f82999c682b666a7a9ceeac5c1982a8aeeb7518cb4a488935">FileTypes</a>
</li>
<li>TSVToTargetedExperiment_()
: <a class="el" href="classOpenMS_1_1TransitionTSVReader.html#a8ce28c35947a6b833052e7ca10e374e4">TransitionTSVReader</a>
</li>
<li>tv
: <a class="el" href="structOpenMS_1_1TOPPASScene_1_1TOPPProcess.html#a0ce5c91df58ba9df87bae973065b89bd">TOPPASScene::TOPPProcess</a>
</li>
<li>tv_
: <a class="el" href="classOpenMS_1_1TOPPViewIdentificationViewBehavior.html#a9484b7e630c9f1d8abb3bf4733322239">TOPPViewIdentificationViewBehavior</a>
, <a class="el" href="classOpenMS_1_1TOPPViewSpectraViewBehavior.html#a9484b7e630c9f1d8abb3bf4733322239">TOPPViewSpectraViewBehavior</a>
</li>
<li>TV_ALLFINISHED
: <a class="el" href="classOpenMS_1_1TOPPASVertex.html#a702c2806c07f38b8416b031617dbc82da585f9f45bd1c9ee925bb2605e623ff74">TOPPASVertex</a>
</li>
<li>TV_UNFINISHED
: <a class="el" href="classOpenMS_1_1TOPPASVertex.html#a702c2806c07f38b8416b031617dbc82dad26a5b1c2e27d16a8a780e89a5ddc77c">TOPPASVertex</a>
</li>
<li>TV_UNFINISHED_INBRANCH
: <a class="el" href="classOpenMS_1_1TOPPASVertex.html#a702c2806c07f38b8416b031617dbc82da9022c2a5f69b6bd4f761308fbccfd6ba">TOPPASVertex</a>
</li>
<li>two_d_optimization_
: <a class="el" href="classOpenMS_1_1PeakPickerCWT.html#a1f8dc68c42f6b6a4aeda9824e31338b1">PeakPickerCWT</a>
</li>
<li>TwoDOptimization()
: <a class="el" href="classOpenMS_1_1TwoDOptimization.html#ab3721ba52a2edabdb36248772331cf80">TwoDOptimization</a>
</li>
<li>TXT
: <a class="el" href="structOpenMS_1_1FileTypes.html#a1d1cfd8ffb84e947f82999c682b666a7a523681f1477727482b38d5181ecb35d4">FileTypes</a>
</li>
<li>Type
: <a class="el" href="classOpenMS_1_1IonDetector.html#a1d1cfd8ffb84e947f82999c682b666a7">IonDetector</a>
</li>
<li>type
: <a class="el" href="structOpenMS_1_1ProteinResolver_1_1ResolverResult.html#a7aead736a07eaf25623ad7bfa1f0ee2d">ProteinResolver::ResolverResult</a>
</li>
<li>Type
: <a class="el" href="structseqan_1_1SAValue_3_01Index_3_01StringSet_3_01Peptide_01_4_00_01IndexWotd_3_4_01_4_01_4.html#a0834bd74d7c947d8c0f57413cc042c62">SAValue< Index< StringSet< Peptide >, IndexWotd<> > ></a>
, <a class="el" href="structOpenMS_1_1PeakShape.html#a1d1cfd8ffb84e947f82999c682b666a7">PeakShape</a>
</li>
<li>type
: <a class="el" href="structOpenMS_1_1ParameterInformation.html#a0b5ccf5cce34153e716f9ab35e75c56f">ParameterInformation</a>
, <a class="el" href="structOpenMS_1_1PILISCrossValidation_1_1Option.html#ab6f4e6d3fde00ce906e46494f60dfe7a">PILISCrossValidation::Option</a>
, <a class="el" href="structOpenMS_1_1TOPPASToolVertex_1_1IOInfo.html#ae6cfa1c1ad8b330bf42226d9becd5ac9">TOPPASToolVertex::IOInfo</a>
</li>
<li>Type
: <a class="el" href="classOpenMS_1_1PrecursorIonSelection.html#a1d1cfd8ffb84e947f82999c682b666a7">PrecursorIonSelection</a>
</li>
<li>type
: <a class="el" href="classOpenMS_1_1LayerData.html#ac52af21f72e9a83ef5e2e7076bae30e4">LayerData</a>
, <a class="el" href="structOpenMS_1_1ProteinResolver_1_1ProteinEntry.html#a7aead736a07eaf25623ad7bfa1f0ee2d">ProteinResolver::ProteinEntry</a>
</li>
<li>Type
: <a class="el" href="structOpenMS_1_1PILISCrossValidation_1_1Option.html#a1d1cfd8ffb84e947f82999c682b666a7">PILISCrossValidation::Option</a>
, <a class="el" href="classOpenMS_1_1LPWrapper.html#a1d1cfd8ffb84e947f82999c682b666a7">LPWrapper</a>
</li>
<li>type
: <a class="el" href="structOpenMS_1_1PeakShape.html#ab6f4e6d3fde00ce906e46494f60dfe7a">PeakShape</a>
</li>
<li>Type
: <a class="el" href="classOpenMS_1_1ListEditor.html#a1d1cfd8ffb84e947f82999c682b666a7">ListEditor</a>
</li>
<li>type
: <a class="el" href="classOpenMS_1_1Internal_1_1ParamXMLHandler.html#a0b86e44425dbe3c9d866aa273f87828a">ParamXMLHandler</a>
</li>
<li>Type
: <a class="el" href="structOpenMS_1_1FileTypes.html#a1d1cfd8ffb84e947f82999c682b666a7">FileTypes</a>
</li>
<li>type_
: <a class="el" href="classOpenMS_1_1SampleTreatment.html#a0bfd23e2ac1b1a4933438d6080550d5f">SampleTreatment</a>
, <a class="el" href="classOpenMS_1_1MassAnalyzer.html#a482cd79c85fed1c3f37f716b17b5f161">MassAnalyzer</a>
, <a class="el" href="classOpenMS_1_1TOPPASToolVertex.html#a0bfd23e2ac1b1a4933438d6080550d5f">TOPPASToolVertex</a>
, <a class="el" href="classOpenMS_1_1SpectrumSettings.html#aafc1de6211f4b369604089d436045632">SpectrumSettings</a>
, <a class="el" href="classOpenMS_1_1ProgressLogger.html#a7c691d7de2a43bc5606e96cb15da3641">ProgressLogger</a>
, <a class="el" href="classOpenMS_1_1IonDetectorVisualizer.html#a5692663b51d73b808a49328d8fa70496">IonDetectorVisualizer</a>
, <a class="el" href="classOpenMS_1_1PrecursorIonSelection.html#ae96b07c06ceff094f476fd92cbe89e10">PrecursorIonSelection</a>
, <a class="el" href="classOpenMS_1_1IonDetector.html#ae96b07c06ceff094f476fd92cbe89e10">IonDetector</a>
, <a class="el" href="classOpenMS_1_1MassAnalyzerVisualizer.html#a5692663b51d73b808a49328d8fa70496">MassAnalyzerVisualizer</a>
, <a class="el" href="classOpenMS_1_1SpectrumSettingsVisualizer.html#a5692663b51d73b808a49328d8fa70496">SpectrumSettingsVisualizer</a>
, <a class="el" href="classOpenMS_1_1Internal_1_1ListEditorDelegate.html#a3c44143a38ec9aeb21a129a6db6a7a5e">ListEditorDelegate</a>
, <a class="el" href="classOpenMS_1_1ChromatogramSettings.html#a101d5a4cbd182c12ca7cdef3e6580f4c">ChromatogramSettings</a>
, <a class="el" href="classOpenMS_1_1Internal_1_1ListTable.html#a3c44143a38ec9aeb21a129a6db6a7a5e">ListTable</a>
, <a class="el" href="classOpenMS_1_1ListEditor.html#a3c44143a38ec9aeb21a129a6db6a7a5e">ListEditor</a>
</li>
<li>typeName_
: <a class="el" href="classOpenMS_1_1Internal_1_1ListEditorDelegate.html#ad459f11476d8bc8b01c2636e5a93f66a">ListEditorDelegate</a>
</li>
<li>TYPENULL
: <a class="el" href="classOpenMS_1_1IonDetector.html#a1d1cfd8ffb84e947f82999c682b666a7a7d066f30823d68dafa1f1746027390b5">IonDetector</a>
</li>
<li>types
: <a class="el" href="structOpenMS_1_1Internal_1_1ToolDescriptionInternal.html#a7f3a6729bd30019e2b5169b6b8098f7e">ToolDescriptionInternal</a>
</li>
<li>typeToMZML()
: <a class="el" href="structOpenMS_1_1FileTypes.html#a854df315fb804a3fba0232334a7f1d0f">FileTypes</a>
</li>
<li>typeToName()
: <a class="el" href="structOpenMS_1_1FileTypes.html#af5492ebd6be6c42ac2be3f72da408fd2">FileTypes</a>
</li>
</ul>
</div><!-- contents -->
<HR style="height:1px; border:none; border-top:1px solid #c0c0c0;">
<TABLE width="100%" border="0">
<TR>
<TD><font color="#c0c0c0">OpenMS / TOPP release 1.11.1</font></TD>
<TD align="right"><font color="#c0c0c0">Documentation generated on Thu Nov 14 2013 11:20:59 using doxygen 1.8.5</font></TD>
</TR>
</TABLE>
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