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<h3><a class="anchor" id="index_r"></a>- r -</h3><ul>
<li>r_r_obj_
: <a class="el" href="classOpenMS_1_1Internal_1_1MzQuantMLHandler.html#a2ee174601c949239044862c5fee394c9">MzQuantMLHandler</a>
</li>
<li>r_rtemp_
: <a class="el" href="classOpenMS_1_1Internal_1_1MzQuantMLHandler.html#a039dc3897ce8684641fbbef279f185d5">MzQuantMLHandler</a>
</li>
<li>r_squared_
: <a class="el" href="classOpenMS_1_1Math_1_1LinearRegression.html#a1243d6935368ecf2a9c9b69db96047fd">LinearRegression</a>
</li>
<li>r_value
: <a class="el" href="structOpenMS_1_1PeakShape.html#acec96c76b28be5f89d2966092930e242">PeakShape</a>
</li>
<li>radius
: <a class="el" href="structOpenMS_1_1LocalLinearMap_1_1LLMParam.html#a5ba495b5ed499e9340ba75999ec131b4">LocalLinearMap::LLMParam</a>
</li>
<li>radius_
: <a class="el" href="classOpenMS_1_1PeakPickerCWT.html#a1d6c2998e5ce95455a58ab8e2ddf04e8">PeakPickerCWT</a>
</li>
<li>rand_gen_
: <a class="el" href="classOpenMS_1_1ConfidenceScoring.html#a565f3f62b93681901b2582a5678cb3bf">ConfidenceScoring</a>
</li>
<li>range
: <a class="el" href="structOpenMS_1_1SILACFiltering_1_1BlacklistEntry.html#a572b06b0b5a1a7ab7757e42b0d4f5691">SILACFiltering::BlacklistEntry</a>
</li>
<li>rank_
: <a class="el" href="classOpenMS_1_1IdentificationHit.html#ab6e704d76fa6d4ab1114e56e5bbe21c6">IdentificationHit</a>
, <a class="el" href="classOpenMS_1_1PeptideHit.html#a4b3d987afc8cebd1a59fb53b3c0bd99c">PeptideHit</a>
, <a class="el" href="classOpenMS_1_1ProteinHit.html#a4b3d987afc8cebd1a59fb53b3c0bd99c">ProteinHit</a>
</li>
<li>rank_sp_weights_
: <a class="el" href="classOpenMS_1_1SequestOutfile.html#a71f0e555afd0d4a2e48b71dad00ba762">SequestOutfile</a>
</li>
<li>ratio_max_
: <a class="el" href="classOpenMS_1_1FuzzyStringComparator.html#a93d483a2d451e7382aab6a885011225e">FuzzyStringComparator</a>
</li>
<li>ratio_max_allowed_
: <a class="el" href="classOpenMS_1_1FuzzyStringComparator.html#a02dd1af598a1b912b0bad7dd92d8c5ae">FuzzyStringComparator</a>
</li>
<li>ratio_value_
: <a class="el" href="structOpenMS_1_1ConsensusFeature_1_1Ratio.html#af46abcc85c911e717e567bddd38d0f0b">ConsensusFeature::Ratio</a>
</li>
<li>ratios_
: <a class="el" href="classOpenMS_1_1ConsensusFeature.html#a99da49a402181e9000cb53a50bec5393">ConsensusFeature</a>
</li>
<li>raw_data_first
: <a class="el" href="structOpenMS_1_1TwoDOptimization_1_1Data.html#a16930394d61d06ff8227219211874592">TwoDOptimization::Data</a>
</li>
<li>raw_files_
: <a class="el" href="structOpenMS_1_1MSQuantifications_1_1Assay.html#a5e0f51092f05b281188e0051d499b07c">MSQuantifications::Assay</a>
</li>
<li>raw_spec_names
: <a class="el" href="classOpenMS_1_1LCMS.html#aa9a3ceeb8749addce3de62f4b0ca612e">LCMS</a>
</li>
<li>rawIsotopes_
: <a class="el" href="classOpenMS_1_1ConsensusIsotopePattern.html#aa283657eb5ff36663369cf80142d0f2d">ConsensusIsotopePattern</a>
</li>
<li>reachable_
: <a class="el" href="classOpenMS_1_1TOPPASVertex.html#ac4dc8f3cd84dada9ba185025e46079f1">TOPPASVertex</a>
</li>
<li>reagent_name_
: <a class="el" href="classOpenMS_1_1Modification.html#a59b3681515233e08429369def98268da">Modification</a>
</li>
<li>real_2D_
: <a class="el" href="classOpenMS_1_1TwoDOptimization.html#a5ecbb7085dd05993affbe76a8eae8718">TwoDOptimization</a>
</li>
<li>real_RT_votes_cutoff_
: <a class="el" href="classOpenMS_1_1FeatureFinderAlgorithmIsotopeWavelet.html#ab9444d66ec037a0f90523b6ac87c9087">FeatureFinderAlgorithmIsotopeWavelet< PeakType, FeatureType ></a>
</li>
<li>recent_actions_
: <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a28ea0ef456a6aed8205de4628b9e162d">TOPPViewBase</a>
</li>
<li>recent_files_
: <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a2d213378ad7f5fb2aa6e5c7e00c6542f">TOPPViewBase</a>
</li>
<li>record_length_
: <a class="el" href="classOpenMS_1_1InspectOutfile.html#a22406b9e4a43d545c303bdf1b8ff593e">InspectOutfile</a>
</li>
<li>recursion_depth_
: <a class="el" href="classOpenMS_1_1ProgressLogger.html#a94eb3ef5ef94b83eb348dd00a2b53119">ProgressLogger</a>
</li>
<li>reduce_by_factor_
: <a class="el" href="classOpenMS_1_1ParentPeakMower.html#a3174483bf9e8b72dd756ac6ccd837aa9">ParentPeakMower</a>
</li>
<li>reestimate_mt_sd_
: <a class="el" href="classOpenMS_1_1MassTraceDetection.html#ad0503b35c5440d9f490b0a47a176bdcd">MassTraceDetection</a>
</li>
<li>ref
: <a class="el" href="classOpenMS_1_1HierarchicalClustering_1_1TreeNode.html#a0e6ef4580b37ac6b010bef4cbc9b72d3">HierarchicalClustering< PointRef >::TreeNode</a>
</li>
<li>ref_
: <a class="el" href="structOpenMS_1_1PrecisionWrapper.html#a99c5de27ecd7952a2587fe6d069d515c">PrecisionWrapper< FloatingPointType ></a>
</li>
<li>ref_intens
: <a class="el" href="structOpenMS_1_1IsotopeWaveletTransform_1_1BoxElement.html#a62e26b2bd8e4c4038f96c14cae131978">IsotopeWaveletTransform< PeakType >::BoxElement</a>
</li>
<li>ref_map_id_
: <a class="el" href="classOpenMS_1_1IsobaricNormalizer.html#a899ad5d48301da6b0dcc4be09d5cf21e">IsobaricNormalizer</a>
</li>
<li>ref_param_
: <a class="el" href="classOpenMS_1_1Internal_1_1MzMLHandler.html#a5a4f408867d428d90605cbfdf5b4a507">MzMLHandler< MapType ></a>
</li>
<li>reference_
: <a class="el" href="classOpenMS_1_1MapAlignmentAlgorithmIdentification.html#a8c30e6cfc94357ef436d616a87e68ae0">MapAlignmentAlgorithmIdentification</a>
, <a class="el" href="classOpenMS_1_1MapAlignmentAlgorithmPoseClustering.html#a0a180d56906b4980aa2719fc500cd2de">MapAlignmentAlgorithmPoseClustering</a>
, <a class="el" href="classOpenMS_1_1IsotopeWaveletTransform_1_1TransSpectrum.html#af0266aa100043c3b03d6b1fce8f567a3">IsotopeWaveletTransform< PeakType >::TransSpectrum</a>
</li>
<li>reference_channel_
: <a class="el" href="classOpenMS_1_1ItraqEightPlexQuantitationMethod.html#a2f83ab7ec20f11592f41f7baa27f0e0c">ItraqEightPlexQuantitationMethod</a>
, <a class="el" href="classOpenMS_1_1ItraqFourPlexQuantitationMethod.html#a2f83ab7ec20f11592f41f7baa27f0e0c">ItraqFourPlexQuantitationMethod</a>
, <a class="el" href="classOpenMS_1_1TMTSixPlexQuantitationMethod.html#a2f83ab7ec20f11592f41f7baa27f0e0c">TMTSixPlexQuantitationMethod</a>
</li>
<li>reference_channel_name_
: <a class="el" href="classOpenMS_1_1IsobaricNormalizer.html#a9bfdeef5c9747d8394796dc0fdefe618">IsobaricNormalizer</a>
</li>
<li>reference_index_
: <a class="el" href="classOpenMS_1_1MapAlignmentAlgorithmIdentification.html#a6ccd066fbeac50700c0e5312064acec1">MapAlignmentAlgorithmIdentification</a>
</li>
<li>refine_
: <a class="el" href="classOpenMS_1_1XTandemInfile.html#a8a9945a699a378359b462bab6535842b">XTandemInfile</a>
</li>
<li>refine_max_valid_evalue_
: <a class="el" href="classOpenMS_1_1XTandemInfile.html#a48b3fbd29cb3c6c27c34beb3c167611e">XTandemInfile</a>
</li>
<li>reflectron_state_
: <a class="el" href="classOpenMS_1_1MassAnalyzer.html#a177c6d1d70c318e0cd2cafd67ef45cda">MassAnalyzer</a>
, <a class="el" href="classOpenMS_1_1MassAnalyzerVisualizer.html#af7018a57c821d8d92e7e2de186cc1dea">MassAnalyzerVisualizer</a>
</li>
<li>reg_models
: <a class="el" href="structOpenMS_1_1SvmTheoreticalSpectrumGenerator_1_1SvmModelParameterSet.html#a4b96023be9755df936a0c1cf232ab90f">SvmTheoreticalSpectrumGenerator::SvmModelParameterSet</a>
</li>
<li>region_
: <a class="el" href="classOpenMS_1_1SimpleExtender.html#a2a565aa56d3937ea9ceefca1780ace7d">SimpleExtender< PeakType, FeatureType ></a>
</li>
<li>region_rt_span_
: <a class="el" href="classOpenMS_1_1EGHTraceFitter.html#aa4be140bb570cdd9138623c355d5d5f2">EGHTraceFitter< PeakType ></a>
, <a class="el" href="classOpenMS_1_1GaussTraceFitter.html#aa4be140bb570cdd9138623c355d5d5f2">GaussTraceFitter< PeakType ></a>
</li>
<li>registered_at_
: <a class="el" href="classOpenMS_1_1Logger_1_1LogStreamNotifier.html#aa6125fdba88c92f6dfc4f415491130f0">LogStreamNotifier</a>
</li>
<li>registry_
: <a class="el" href="classOpenMS_1_1MetaInfo.html#ac5710c7c15e26d6715e40dac27f28297">MetaInfo</a>
</li>
<li>reindexed_peptides
: <a class="el" href="structOpenMS_1_1ProteinResolver_1_1ResolverResult.html#a8b52860fe9ebf0f4e256f2d8e5a03363">ProteinResolver::ResolverResult</a>
</li>
<li>reindexed_proteins
: <a class="el" href="structOpenMS_1_1ProteinResolver_1_1ResolverResult.html#a7c70a3c528c8ec1e1a1d496569bc4967">ProteinResolver::ResolverResult</a>
</li>
<li>rel_error_
: <a class="el" href="classOpenMS_1_1LevMarqFitter1D.html#ab75e42fa8dcc243c38f9eebbdb760196">LevMarqFitter1D</a>
</li>
<li>rel_prec_error
: <a class="el" href="structRNPxlReportRow.html#a75941fa7994cbf376b85fc38c98baf6f">RNPxlReportRow</a>
</li>
<li>relative_peak_position
: <a class="el" href="structOpenMS_1_1SILACFiltering_1_1BlacklistEntry.html#a677d19787b3d1713412a9da73f159c1a">SILACFiltering::BlacklistEntry</a>
</li>
<li>relevant
: <a class="el" href="structOpenMS_1_1FeatureDistance_1_1DistanceParams__.html#a398fb09ef444497b2e3506b5b229b187">FeatureDistance::DistanceParams_</a>
</li>
<li>reliability
: <a class="el" href="structOpenMS_1_1MzTabProteinSectionRow.html#aad5da1ffa652c5b8b5a9695cca9ee7b4">MzTabProteinSectionRow</a>
, <a class="el" href="structOpenMS_1_1MzTabPeptideSectionRow.html#aad5da1ffa652c5b8b5a9695cca9ee7b4">MzTabPeptideSectionRow</a>
, <a class="el" href="structOpenMS_1_1MzTabSmallMoleculeSectionRow.html#aad5da1ffa652c5b8b5a9695cca9ee7b4">MzTabSmallMoleculeSectionRow</a>
</li>
<li>remove_low_intensity_quantifications_
: <a class="el" href="classOpenMS_1_1IsobaricChannelExtractor.html#a398f928f66bdb09a53a3c8c46f32891b">IsobaricChannelExtractor</a>
</li>
<li>remove_precursor_near_peaks_
: <a class="el" href="classOpenMS_1_1SequestInfile.html#a7abc7a6d8eeb5c868685d40e53575b9b">SequestInfile</a>
</li>
<li>removebutton_
: <a class="el" href="classOpenMS_1_1GradientVisualizer.html#af178fe6f8c52a5c4ad6d71eed08ea5c3">GradientVisualizer</a>
</li>
<li>removeRowButton_
: <a class="el" href="classOpenMS_1_1ListEditor.html#a4e80be0e4ae5504b885566c6f14f2f08">ListEditor</a>
</li>
<li>replacement_
: <a class="el" href="classOpenMS_1_1SVOutStream.html#aa96e11faca88d3ed0acf9921422caa77">SVOutStream</a>
</li>
<li>report_summed_ints_
: <a class="el" href="classOpenMS_1_1FeatureFindingMetabo.html#a558876928760200a0b0b062fd4c345bd">FeatureFindingMetabo</a>
</li>
<li>reported_mz_
: <a class="el" href="classOpenMS_1_1FeatureFinderAlgorithmPicked.html#ae464adecb765a4c2b9c35b374620454e">FeatureFinderAlgorithmPicked< PeakType, FeatureType ></a>
</li>
<li>reporter_mass_shift_
: <a class="el" href="classOpenMS_1_1IsobaricChannelExtractor.html#a2790d6522e56f22cff5ce7e9f15ba622">IsobaricChannelExtractor</a>
</li>
<li>require_args_
: <a class="el" href="classOpenMS_1_1TOPPBase.html#a4455a77e7412b4bf41dbd085484196c8">TOPPBase</a>
</li>
<li>required
: <a class="el" href="structOpenMS_1_1ParameterInformation.html#a89ebe0265f74c9919a622df7dccbfe5c">ParameterInformation</a>
</li>
<li>requirement_level_
: <a class="el" href="classOpenMS_1_1CVMappingRule.html#ae92e11ad68321a8d263a7bf083e31cb0">CVMappingRule</a>
</li>
<li>requires_login_
: <a class="el" href="classOpenMS_1_1MascotRemoteQuery.html#adb87e15808abc5db5f3c13bcb186a255">MascotRemoteQuery</a>
</li>
<li>res_
: <a class="el" href="classOpenMS_1_1IonDetectorVisualizer.html#a81db0a60c80ab311b6c428eeb1b83d88">IonDetectorVisualizer</a>
, <a class="el" href="classOpenMS_1_1MassAnalyzerVisualizer.html#a81db0a60c80ab311b6c428eeb1b83d88">MassAnalyzerVisualizer</a>
</li>
<li>res_base_
: <a class="el" href="classOpenMS_1_1RawMSSignalSimulation.html#adbfbec82b64e1711adf583d967462c6a">RawMSSignalSimulation</a>
</li>
<li>res_method_
: <a class="el" href="classOpenMS_1_1MassAnalyzerVisualizer.html#a71f80f55d2f4d635b7747ce336bd15c0">MassAnalyzerVisualizer</a>
</li>
<li>res_model_
: <a class="el" href="classOpenMS_1_1RawMSSignalSimulation.html#a3f60891f90436d076f7219221ff2b963">RawMSSignalSimulation</a>
</li>
<li>res_type_
: <a class="el" href="classOpenMS_1_1MassAnalyzerVisualizer.html#a567bf3d9a9c8e895d3107df42cd55491">MassAnalyzerVisualizer</a>
</li>
<li>residue
: <a class="el" href="structOpenMS_1_1SvmTheoreticalSpectrumGenerator_1_1IonType.html#afec415b55cb87cb4d8db0e8680d0db11">SvmTheoreticalSpectrumGenerator::IonType</a>
</li>
<li>residue_mod_names_
: <a class="el" href="classOpenMS_1_1ResidueDB.html#ade72860b5ee88a20e586ebbd6ed2c5db">ResidueDB</a>
</li>
<li>residue_names_
: <a class="el" href="classOpenMS_1_1ResidueDB.html#a32ad254684818b6c4d6c4aa606f6900e">ResidueDB</a>
</li>
<li>residue_sets_
: <a class="el" href="classOpenMS_1_1Residue.html#ae6f57e172a3d3a9b17e167d195561179">Residue</a>
, <a class="el" href="classOpenMS_1_1ResidueDB.html#ae6f57e172a3d3a9b17e167d195561179">ResidueDB</a>
</li>
<li>residue_to_name_
: <a class="el" href="classOpenMS_1_1CompNovoIdentificationBase.html#ab935c51dfc71c9f00e6bdd21a1932c6f">CompNovoIdentificationBase</a>
</li>
<li>residues_
: <a class="el" href="classOpenMS_1_1ResidueDB.html#adc7ac110999238f38e16e556b1aede95">ResidueDB</a>
</li>
<li>residues_by_set_
: <a class="el" href="classOpenMS_1_1ResidueDB.html#a6d9114ff91d51933c43c531dc88ccd39">ResidueDB</a>
</li>
<li>residues_in_upper_case_
: <a class="el" href="classOpenMS_1_1SequestInfile.html#a57c2fba9aa61eaba9e713013544d45f7">SequestInfile</a>
</li>
<li>resolution_
: <a class="el" href="classOpenMS_1_1IonDetector.html#a9077082049939e6a94a483c2d3417edb">IonDetector</a>
, <a class="el" href="classOpenMS_1_1MassAnalyzer.html#a9077082049939e6a94a483c2d3417edb">MassAnalyzer</a>
</li>
<li>resolution_method_
: <a class="el" href="classOpenMS_1_1MassAnalyzer.html#a4f1058591a86fa3fa9f457d95b2b9ac6">MassAnalyzer</a>
</li>
<li>resolution_type_
: <a class="el" href="classOpenMS_1_1MassAnalyzer.html#ada201cded70d62bef52a0182ca4b330c">MassAnalyzer</a>
</li>
<li>resolver_result_
: <a class="el" href="classOpenMS_1_1ProteinResolver.html#a4c49b96ec457ee2202e74f5ada1e40ff">ProteinResolver</a>
</li>
<li>restrictions
: <a class="el" href="classOpenMS_1_1Internal_1_1ParamXMLHandler.html#aa78b13fdd78769b027303c137369d5b6">ParamXMLHandler</a>
</li>
<li>restrictions_
: <a class="el" href="classOpenMS_1_1Internal_1_1ListEditorDelegate.html#ac3eaf9b620e3aebad93c6c792059d847">ListEditorDelegate</a>
</li>
<li>restrictions_index
: <a class="el" href="classOpenMS_1_1Internal_1_1ParamXMLHandler.html#a3b1982b56ec29de64c7945de479a8fbd">ParamXMLHandler</a>
</li>
<li>result_
: <a class="el" href="classOpenMS_1_1DBOpenDialog.html#aa3468c588917608f7e6a69870d0bad77">DBOpenDialog</a>
</li>
<li>resume_source_
: <a class="el" href="classOpenMS_1_1TOPPASScene.html#ae53b40f3518e3b805bfc2c591125f17f">TOPPASScene</a>
</li>
<li>retention_
: <a class="el" href="classOpenMS_1_1EGHFitter1D.html#a7845e32064b46a963bc670a909f5c065">EGHFitter1D</a>
, <a class="el" href="classOpenMS_1_1EmgFitter1D.html#a7845e32064b46a963bc670a909f5c065">EmgFitter1D</a>
, <a class="el" href="classOpenMS_1_1EmgModel.html#a7845e32064b46a963bc670a909f5c065">EmgModel</a>
</li>
<li>retention_time
: <a class="el" href="structOpenMS_1_1MzTabPeptideSectionRow.html#a1b83b8bd7c7be9d42303c040baab5077">MzTabPeptideSectionRow</a>
, <a class="el" href="structOpenMS_1_1MzTabSmallMoleculeSectionRow.html#a1b83b8bd7c7be9d42303c040baab5077">MzTabSmallMoleculeSectionRow</a>
</li>
<li>retention_time_
: <a class="el" href="classOpenMS_1_1MascotInfile.html#af4eca834d1d6d03252647c8261d43bfe">MascotInfile</a>
, <a class="el" href="classOpenMS_1_1MSSpectrum.html#af4eca834d1d6d03252647c8261d43bfe">MSSpectrum< PeakT ></a>
</li>
<li>reverse_
: <a class="el" href="classOpenMS_1_1IsInIsolationWindowSizeRange.html#aeae704668ea77ad91c0d84485ef7677e">IsInIsolationWindowSizeRange< SpectrumType ></a>
, <a class="el" href="classOpenMS_1_1IsEmptySpectrum.html#aeae704668ea77ad91c0d84485ef7677e">IsEmptySpectrum< SpectrumType ></a>
, <a class="el" href="classOpenMS_1_1HasMetaValue.html#aeae704668ea77ad91c0d84485ef7677e">HasMetaValue< MetaContainer ></a>
, <a class="el" href="classOpenMS_1_1InRTRange.html#aeae704668ea77ad91c0d84485ef7677e">InRTRange< SpectrumType ></a>
, <a class="el" href="classOpenMS_1_1InMSLevelRange.html#aeae704668ea77ad91c0d84485ef7677e">InMSLevelRange< SpectrumType ></a>
, <a class="el" href="classOpenMS_1_1HasScanMode.html#aeae704668ea77ad91c0d84485ef7677e">HasScanMode< SpectrumType ></a>
, <a class="el" href="classOpenMS_1_1IsZoomSpectrum.html#aeae704668ea77ad91c0d84485ef7677e">IsZoomSpectrum< SpectrumType ></a>
, <a class="el" href="classOpenMS_1_1HasActivationMethod.html#aeae704668ea77ad91c0d84485ef7677e">HasActivationMethod< SpectrumType ></a>
, <a class="el" href="classOpenMS_1_1InPrecursorMZRange.html#aeae704668ea77ad91c0d84485ef7677e">InPrecursorMZRange< SpectrumType ></a>
, <a class="el" href="classOpenMS_1_1HasPrecursorCharge.html#aeae704668ea77ad91c0d84485ef7677e">HasPrecursorCharge< SpectrumType ></a>
, <a class="el" href="classOpenMS_1_1InMzRange.html#aeae704668ea77ad91c0d84485ef7677e">InMzRange< PeakType ></a>
, <a class="el" href="classOpenMS_1_1InIntensityRange.html#aeae704668ea77ad91c0d84485ef7677e">InIntensityRange< PeakType ></a>
, <a class="el" href="classOpenMS_1_1IsInCollisionEnergyRange.html#aeae704668ea77ad91c0d84485ef7677e">IsInCollisionEnergyRange< SpectrumType ></a>
</li>
<li>right
: <a class="el" href="classOpenMS_1_1HierarchicalClustering_1_1TreeNode.html#ac76cecbc21e446a7a39a3a9f69fd8296">HierarchicalClustering< PointRef >::TreeNode</a>
, <a class="el" href="classOpenMS_1_1HierarchicalClustering_1_1TreeDistance.html#ac76cecbc21e446a7a39a3a9f69fd8296">HierarchicalClustering< PointRef >::TreeDistance</a>
, <a class="el" href="structOpenMS_1_1PeakPickerCWT_1_1PeakArea__.html#a4c1fce8761ad1c8a2cec21e1170c9281">PeakPickerCWT::PeakArea_</a>
</li>
<li>right_child
: <a class="el" href="classOpenMS_1_1BinaryTreeNode.html#ad4b004b1a95e77a7f3062df0e1cff1ae">BinaryTreeNode</a>
</li>
<li>right_endpoint_
: <a class="el" href="structOpenMS_1_1PeakShape.html#a8c4f642d031eb6b58645c8664a4a6edc">PeakShape</a>
</li>
<li>right_iterator_set_
: <a class="el" href="structOpenMS_1_1PeakShape.html#ad854a86aa9b4a56b0d270ac1eee81174">PeakShape</a>
</li>
<li>right_splitter_
: <a class="el" href="classOpenMS_1_1HistogramWidget.html#a9fd950a0e0b411a8a88cec15396847df">HistogramWidget</a>
</li>
<li>right_width
: <a class="el" href="structOpenMS_1_1PeakShape.html#aee68061fb00b7a84b354bac91e492039">PeakShape</a>
</li>
<li>RNA
: <a class="el" href="structRNPxlReportRow.html#a8ccbf7da065a5c932c182e8dca0fe6b3">RNPxlReportRow</a>
</li>
<li>RNA_weight
: <a class="el" href="structRNPxlReportRow.html#a77169c55d2e4e0742241c4221a98f542">RNPxlReportRow</a>
</li>
<li>rnd_gen_
: <a class="el" href="classOpenMS_1_1IonizationSimulation.html#a1755a34bd4d88feb6a87a209273177eb">IonizationSimulation</a>
, <a class="el" href="classOpenMS_1_1RawMSSignalSimulation.html#a1755a34bd4d88feb6a87a209273177eb">RawMSSignalSimulation</a>
, <a class="el" href="classOpenMS_1_1RawTandemMSSignalSimulation.html#a1755a34bd4d88feb6a87a209273177eb">RawTandemMSSignalSimulation</a>
, <a class="el" href="classOpenMS_1_1RTSimulation.html#a1755a34bd4d88feb6a87a209273177eb">RTSimulation</a>
</li>
<li>rng_
: <a class="el" href="classOpenMS_1_1BaseLabeler.html#acf6ab009189a770808e644baed4a2c6e">BaseLabeler</a>
</li>
<li>root_
: <a class="el" href="classOpenMS_1_1Param_1_1ParamIterator.html#a516c3ed4910bf9f3d7a7c055dbe6fc52">Param::ParamIterator</a>
, <a class="el" href="classOpenMS_1_1Param.html#a8387abe1918f6a7aa10a915eded3906a">Param</a>
</li>
<li>round_based_mode_
: <a class="el" href="classOpenMS_1_1TOPPASMergerVertex.html#a7b3297315d2b286c6b73541dbd804259">TOPPASMergerVertex</a>
</li>
<li>round_counter_
: <a class="el" href="classOpenMS_1_1TOPPASVertex.html#a5ef4802a55dfe5d9b61e9510b32f79d6">TOPPASVertex</a>
</li>
<li>round_total_
: <a class="el" href="classOpenMS_1_1TOPPASVertex.html#a32977440cc590fd8f6815392ac93ef68">TOPPASVertex</a>
</li>
<li>rounding_errors_
: <a class="el" href="classOpenMS_1_1ims_1_1RealMassDecomposer.html#a073bf185839c7486fc98ba7d0a9a7463">RealMassDecomposer</a>
</li>
<li>row_
: <a class="el" href="classOpenMS_1_1QcMLFile.html#a4afd466c8ba751012ef01fde24b12941">QcMLFile</a>
, <a class="el" href="classOpenMS_1_1BaseVisualizerGUI.html#ab34641090aa3943e886526f911e1782a">BaseVisualizerGUI</a>
</li>
<li>rownames_
: <a class="el" href="structOpenSwath_1_1DataMatrix.html#aec7848281006030f4b73ad0dbb6ae5aa">DataMatrix</a>
</li>
<li>rows_
: <a class="el" href="classOpenMS_1_1Matrix.html#abefd2627230d15d4f7d82cb130c3a394">Matrix< Value ></a>
</li>
<li>rsd_
: <a class="el" href="classOpenMS_1_1Math_1_1LinearRegression.html#ae420fad2f5cf2eba659b3c789d7ae444">LinearRegression</a>
</li>
<li>RT
: <a class="el" href="structOpenSwath_1_1SpectrumMeta.html#aa4f3cdb2683e5ca5c4210c5891eb9603">SpectrumMeta</a>
, <a class="el" href="structOpenMS_1_1FeatureFinderAlgorithmIsotopeWavelet_1_1BoxElement.html#afc4478a0397a76fef003746ff45fc201">FeatureFinderAlgorithmIsotopeWavelet< PeakType, FeatureType >::BoxElement</a>
</li>
<li>rt
: <a class="el" href="classOpenMS_1_1SILACPoint.html#a365131e721e286ddc62d0e6e60f382a1">SILACPoint</a>
, <a class="el" href="structOpenSwath_1_1Peptide.html#ae5ee906bf451a6150d80754f4068dc58">Peptide</a>
</li>
<li>RT
: <a class="el" href="structOpenMS_1_1Interfaces_1_1SpectrumMeta.html#aa4f3cdb2683e5ca5c4210c5891eb9603">SpectrumMeta</a>
, <a class="el" href="structOpenMS_1_1IsotopeWaveletTransform_1_1BoxElement.html#afc4478a0397a76fef003746ff45fc201">IsotopeWaveletTransform< PeakType >::BoxElement</a>
</li>
<li>rt
: <a class="el" href="structRNPxlReportRow.html#a365131e721e286ddc62d0e6e60f382a1">RNPxlReportRow</a>
, <a class="el" href="structOpenSwath_1_1LightPeptide.html#ae5ee906bf451a6150d80754f4068dc58">LightPeptide</a>
</li>
<li>rt_
: <a class="el" href="classOpenMS_1_1PepXMLFile.html#a51db91c41ce0919dd864710eb01a99aa">PepXMLFile</a>
</li>
<li>rt_bridge_
: <a class="el" href="classOpenMS_1_1InclusionExclusionList_1_1WindowDistance__.html#a0ab668bebd95ca6e5effa344be9c4731">InclusionExclusionList::WindowDistance_</a>
</li>
<li>rt_calibrated
: <a class="el" href="structOpenMS_1_1TransitionTSVReader_1_1TSVTransition.html#add0f3be99b097cd34fcf432c63a66481">TransitionTSVReader::TSVTransition</a>
</li>
<li>rt_coef
: <a class="el" href="classOpenMS_1_1ConfidenceScoring.html#a888c258d17bb022450eb4fa36d51b680">ConfidenceScoring</a>
</li>
<li>rt_end
: <a class="el" href="structOpenMS_1_1RawMSSignalSimulation_1_1ContaminantInfo.html#a03c3071ca40e4f3dcd6aa74c2b08f092">RawMSSignalSimulation::ContaminantInfo</a>
</li>
<li>rt_extraction_window_
: <a class="el" href="classOpenMS_1_1MRMFeatureFinderScoring.html#a22f959483c21d84714446ca1dda67305">MRMFeatureFinderScoring</a>
</li>
<li>RT_index
: <a class="el" href="structOpenMS_1_1IsotopeWaveletTransform_1_1BoxElement.html#aba2639fbb6538864cefddd4d6c8ef417">IsotopeWaveletTransform< PeakType >::BoxElement</a>
</li>
<li>rt_input_data_
: <a class="el" href="classOpenMS_1_1ModelFitter.html#a100b9653d9495c862bc57cee3dcdbb3f">ModelFitter< PeakType, FeatureType ></a>
</li>
<li>RT_interleave_
: <a class="el" href="classOpenMS_1_1FeatureFinderAlgorithmIsotopeWavelet.html#a0864e2810fe75ef5519f320c957efb1b">FeatureFinderAlgorithmIsotopeWavelet< PeakType, FeatureType ></a>
</li>
<li>rt_label_
: <a class="el" href="classOpenMS_1_1TOPPViewBase.html#ae56fd00bb242dcd41b6c096d2ab87a4b">TOPPViewBase</a>
</li>
<li>rt_mapping_
: <a class="el" href="classOpenMS_1_1Internal_1_1MascotXMLHandler.html#a877885217d09009e01a320114fba4961">MascotXMLHandler</a>
</li>
<li>rt_max_
: <a class="el" href="classOpenMS_1_1SpectraMerger_1_1SpectraDistance__.html#addd12cc59f1a0dcd6b23ecd7fb291dfd">SpectraMerger::SpectraDistance_</a>
</li>
<li>rt_max_spacing
: <a class="el" href="classOpenMS_1_1SILACClustering.html#a274c7a9a60aa78250b1475700c0e7ec9">SILACClustering</a>
</li>
<li>rt_min
: <a class="el" href="classOpenMS_1_1SILACAnalyzer.html#a4d532bb9efa7c2aeaedbcf5ff0c13826">SILACAnalyzer</a>
, <a class="el" href="classOpenMS_1_1SILACClustering.html#a283c8b2d66dc9ee37e4feb0d82537808">SILACClustering</a>
</li>
<li>rt_model_file_
: <a class="el" href="classOpenMS_1_1RTSimulation.html#a2ca80ee9bf721feebb4f9db372633a08">RTSimulation</a>
</li>
<li>rt_norm_
: <a class="el" href="classOpenMS_1_1ConfidenceScoring.html#ae06e91f2d119f10cd2a1696dd068348a">ConfidenceScoring</a>
</li>
<li>rt_normalization_factor_
: <a class="el" href="classOpenMS_1_1MRMFeatureFinderScoring.html#a18149f9f24aaea0ec584e290620fbd20">MRMFeatureFinderScoring</a>
</li>
<li>rt_probability
: <a class="el" href="structOpenMS_1_1PSLPFormulation_1_1IndexTriple.html#ad00b56bf94e188184c11c6fd0af6f914">PSLPFormulation::IndexTriple</a>
</li>
<li>rt_prot_map_
: <a class="el" href="classOpenMS_1_1PrecursorIonSelectionPreprocessing.html#ab87e5794342bc6916c2eff56227f1492">PrecursorIonSelectionPreprocessing</a>
</li>
<li>rt_range_
: <a class="el" href="classOpenMS_1_1FeatureFileOptions.html#a995a89bb02a0ffb41ee5b7d69d4dda9b">FeatureFileOptions</a>
, <a class="el" href="classOpenMS_1_1PeakFileOptions.html#a995a89bb02a0ffb41ee5b7d69d4dda9b">PeakFileOptions</a>
</li>
<li>rt_sampling_rate_
: <a class="el" href="classOpenMS_1_1RTSimulation.html#a5070ae6e05eee20e2092127475da3951">RTSimulation</a>
</li>
<li>rt_shift_
: <a class="el" href="classOpenMS_1_1Adduct.html#a1df0bce61094fa69cb0d0864792856c5">Adduct</a>
, <a class="el" href="classOpenMS_1_1Compomer.html#a1df0bce61094fa69cb0d0864792856c5">Compomer</a>
</li>
<li>rt_start
: <a class="el" href="structOpenMS_1_1RawMSSignalSimulation_1_1ContaminantInfo.html#a2810664da1ca109eecd2c9cd2fcaa733">RawMSSignalSimulation::ContaminantInfo</a>
</li>
<li>rt_stat_
: <a class="el" href="classOpenMS_1_1ModelFitter.html#a3c4dee13554dda34293916d83f811aaa">ModelFitter< PeakType, FeatureType ></a>
</li>
<li>rt_threshold
: <a class="el" href="classOpenMS_1_1SILACAnalyzer.html#a920f0e916452ca37d0b646e8e7ed7318">SILACAnalyzer</a>
</li>
<li>rt_tol_
: <a class="el" href="classOpenMS_1_1PepXMLFile.html#a4b56759c1db4a79eb15d182c26752227">PepXMLFile</a>
</li>
<li>rt_tolerance_
: <a class="el" href="classOpenMS_1_1IDMapper.html#a73f60e6ff36e6b7fd8f631003521843c">IDMapper</a>
</li>
<li>rt_trafo_
: <a class="el" href="classOpenMS_1_1ConfidenceScoring.html#a893246275c8a2c59ed7a23d062b70412">ConfidenceScoring</a>
</li>
<li>RT_votes_cutoff_
: <a class="el" href="classOpenMS_1_1FeatureFinderAlgorithmIsotopeWavelet.html#a3fd609fd7b023618f7f2c5c64e8ed803">FeatureFinderAlgorithmIsotopeWavelet< PeakType, FeatureType ></a>
</li>
<li>RTmax_
: <a class="el" href="structOpenMS_1_1InclusionExclusionList_1_1IEWindow.html#ae6203af4dfe6b3dc034e1133da89756f">InclusionExclusionList::IEWindow</a>
</li>
<li>RTmin_
: <a class="el" href="structOpenMS_1_1InclusionExclusionList_1_1IEWindow.html#afd5b56017f716c165df35480f7042bd8">InclusionExclusionList::IEWindow</a>
</li>
<li>rts
: <a class="el" href="classOpenMS_1_1TargetedExperimentHelper_1_1Compound.html#a04646756cfb9003cfa0fdbe7bafef165">Compound</a>
, <a class="el" href="classOpenMS_1_1TargetedExperimentHelper_1_1Peptide.html#a04646756cfb9003cfa0fdbe7bafef165">Peptide</a>
, <a class="el" href="classOpenMS_1_1ReactionMonitoringTransition.html#af35967b3faeadee6a97b446911a79757">ReactionMonitoringTransition</a>
</li>
<li>rts_
: <a class="el" href="classOpenMS_1_1IncludeExcludeTarget.html#a5f4e68f3e2ffd6473e11a44c69e0f1af">IncludeExcludeTarget</a>
</li>
<li>rubber_band_
: <a class="el" href="classOpenMS_1_1SpectrumCanvas.html#ada746321d9ce7e662479d12317b2898b">SpectrumCanvas</a>
</li>
<li>rules_
: <a class="el" href="classOpenMS_1_1Internal_1_1SemanticValidator.html#ad5846355df29e515d6215425a3ca81d1">SemanticValidator</a>
, <a class="el" href="classOpenMS_1_1CVMappingFile.html#aa69465880d51cbf62dc832ce75e4ef59">CVMappingFile</a>
</li>
<li>run_id_
: <a class="el" href="classOpenMS_1_1QcMLFile.html#af80ea356a343775b2e45ae43f3ce2fc0">QcMLFile</a>
</li>
<li>run_Name_ID_map_
: <a class="el" href="classOpenMS_1_1QcMLFile.html#ac4ede9b7aa0e08ae3e7685a2fc6c9e16">QcMLFile</a>
</li>
<li>running_
: <a class="el" href="classOpenMS_1_1TOPPASScene.html#aa440b02cc99bc6923375b0c9db2f2dca">TOPPASScene</a>
</li>
<li>running_avg_
: <a class="el" href="classOpenMS_1_1SimpleExtender.html#a5e88ec4351e6e6835be11ef6fd88a800">SimpleExtender< PeakType, FeatureType ></a>
</li>
<li>runQualityAts_
: <a class="el" href="classOpenMS_1_1QcMLFile.html#a9a64911a7c3f6a46140f5709193f9c1a">QcMLFile</a>
</li>
<li>runQualityQPs_
: <a class="el" href="classOpenMS_1_1QcMLFile.html#a00e21999b0b05556b2eea5cff8cab5a1">QcMLFile</a>
</li>
<li>rWidth
: <a class="el" href="structOpenMS_1_1OptimizationFunctions_1_1PenaltyFactors.html#a478a632c0b5a363e215061428eee1a1c">PenaltyFactors</a>
</li>
</ul>
</div><!-- contents -->
<HR style="height:1px; border:none; border-top:1px solid #c0c0c0;">
<TABLE width="100%" border="0">
<TR>
<TD><font color="#c0c0c0">OpenMS / TOPP release 1.11.1</font></TD>
<TD align="right"><font color="#c0c0c0">Documentation generated on Thu Nov 14 2013 11:20:59 using doxygen 1.8.5</font></TD>
</TR>
</TABLE>
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