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<TITLE>Spectrum Comparison</TITLE>
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<div class="title">Spectrum Comparison</div>  </div>
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<p>The classes within this group are used to compare single spectra, by reporting a similarity value.  
<a href="#details">More...</a></p>
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Classes</h2></td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1BinnedSharedPeakCount.html">BinnedSharedPeakCount</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Compare functor scoring the shared peaks for similarity measurement.  <a href="classOpenMS_1_1BinnedSharedPeakCount.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1BinnedSpectralContrastAngle.html">BinnedSpectralContrastAngle</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Compare functor scoring the spectral contrast angle for similarity measurement.  <a href="classOpenMS_1_1BinnedSpectralContrastAngle.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1BinnedSpectrum.html">BinnedSpectrum</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">This is a binned representation of a PeakSpectrum.  <a href="classOpenMS_1_1BinnedSpectrum.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1BinnedSpectrumCompareFunctor.html">BinnedSpectrumCompareFunctor</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Base class for compare functors of BinnedSpectra.  <a href="classOpenMS_1_1BinnedSpectrumCompareFunctor.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1BinnedSumAgreeingIntensities.html">BinnedSumAgreeingIntensities</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Compare functor scoring the sum of agreeing intensities for similarity measurement.  <a href="classOpenMS_1_1BinnedSumAgreeingIntensities.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1CompareFouriertransform.html">CompareFouriertransform</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Compare Discrete Cosines value from a Fourier transformation, also known as Discrete Cosines Transformation.  <a href="classOpenMS_1_1CompareFouriertransform.html#details">More...</a><br/></td></tr>
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<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1PeakAlignment.html">PeakAlignment</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">make a <a class="el" href="classOpenMS_1_1PeakAlignment.html" title="make a PeakAlignment of two PeakSpectra ">PeakAlignment</a> of two PeakSpectra  <a href="classOpenMS_1_1PeakAlignment.html#details">More...</a><br/></td></tr>
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<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1PeakSpectrumCompareFunctor.html">PeakSpectrumCompareFunctor</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Base class for compare functors of spectra, that return a similiarity value for two spectra.  <a href="classOpenMS_1_1PeakSpectrumCompareFunctor.html#details">More...</a><br/></td></tr>
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<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1SpectraSTSimilarityScore.html">SpectraSTSimilarityScore</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Similarity score of SpectraST.  <a href="classOpenMS_1_1SpectraSTSimilarityScore.html#details">More...</a><br/></td></tr>
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<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1SpectrumAlignment.html">SpectrumAlignment</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Aligns the peaks of two spectra.  <a href="classOpenMS_1_1SpectrumAlignment.html#details">More...</a><br/></td></tr>
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<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1SpectrumAlignmentScore.html">SpectrumAlignmentScore</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Similarity score via spectra alignment.  <a href="classOpenMS_1_1SpectrumAlignmentScore.html#details">More...</a><br/></td></tr>
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<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1SpectrumCheapDPCorr.html">SpectrumCheapDPCorr</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight"><a class="el" href="classOpenMS_1_1SpectrumCheapDPCorr.html" title="SpectrumCheapDPCorr calculates an optimal alignment on stick spectra. ">SpectrumCheapDPCorr</a> calculates an optimal alignment on stick spectra.  <a href="classOpenMS_1_1SpectrumCheapDPCorr.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1SpectrumPrecursorComparator.html">SpectrumPrecursorComparator</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight"><a class="el" href="classOpenMS_1_1SpectrumPrecursorComparator.html" title="SpectrumPrecursorComparator compares just the parent mass of two spectra. ">SpectrumPrecursorComparator</a> compares just the parent mass of two spectra.  <a href="classOpenMS_1_1SpectrumPrecursorComparator.html#details">More...</a><br/></td></tr>
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<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1SteinScottImproveScore.html">SteinScottImproveScore</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Similarity score based of Stein &amp; Scott.  <a href="classOpenMS_1_1SteinScottImproveScore.html#details">More...</a><br/></td></tr>
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<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1ZhangSimilarityScore.html">ZhangSimilarityScore</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Similarity score of Zhang.  <a href="classOpenMS_1_1ZhangSimilarityScore.html#details">More...</a><br/></td></tr>
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<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
<p>The classes within this group are used to compare single spectra, by reporting a similarity value. </p>
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