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<div class="title">Modules</div> </div>
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<div class="textblock">Here is a list of all modules:</div><div class="directory">
<div class="levels">[detail level <span onclick="javascript:toggleLevel(1);">1</span><span onclick="javascript:toggleLevel(2);">2</span>]</div><table class="directory">
<tr id="row_0_" class="even"><td class="entry"><img id="arr_0_" src="ftv2mnode.png" alt="o" width="16" height="22" onclick="toggleFolder('0_')"/><a class="el" href="group__Concept.html" target="_self">Concept</a></td><td class="desc"><a class="el" href="namespaceOpenMS.html" title="Main OpenMS namespace. ">OpenMS</a> concepts (types, macros, ...) </td></tr>
<tr id="row_0_0_"><td class="entry"><img src="ftv2vertline.png" alt="|" width="16" height="22" /><img src="ftv2node.png" alt="o" width="16" height="22" /><a class="el" href="group__ClassTest.html" target="_self">Class test macros</a></td><td class="desc">These macros are used by the test programs in the subdirectory <code>OpenMS/source/TEST</code> </td></tr>
<tr id="row_0_1_" class="even"><td class="entry"><img src="ftv2vertline.png" alt="|" width="16" height="22" /><img src="ftv2node.png" alt="o" width="16" height="22" /><a class="el" href="group__Exceptions.html" target="_self">Exceptions</a></td><td class="desc">Exceptions </td></tr>
<tr id="row_0_2_"><td class="entry"><img src="ftv2vertline.png" alt="|" width="16" height="22" /><img src="ftv2lastnode.png" alt="\" width="16" height="22" /><a class="el" href="group__Conditions.html" target="_self">Condition macros</a></td><td class="desc">Macros used for to enforce preconditions and postconditions </td></tr>
<tr id="row_1_" class="even"><td class="entry"><img src="ftv2node.png" alt="o" width="16" height="22" /><a class="el" href="group__System.html" target="_self">System</a></td><td class="desc">Very vasic functionality like file system or stopwatch </td></tr>
<tr id="row_2_"><td class="entry"><img src="ftv2node.png" alt="o" width="16" height="22" /><a class="el" href="group__Datastructures.html" target="_self">Datastructures</a></td><td class="desc">Auxilary datastructures </td></tr>
<tr id="row_3_" class="even"><td class="entry"><img id="arr_3_" src="ftv2mnode.png" alt="o" width="16" height="22" onclick="toggleFolder('3_')"/><a class="el" href="group__Math.html" target="_self">Math</a></td><td class="desc">Math functions and classes </td></tr>
<tr id="row_3_0_"><td class="entry"><img src="ftv2vertline.png" alt="|" width="16" height="22" /><img src="ftv2node.png" alt="o" width="16" height="22" /><a class="el" href="group__MathFunctionsStatistics.html" target="_self">Statistics functions</a></td><td class="desc">Various statistical functions </td></tr>
<tr id="row_3_1_" class="even"><td class="entry"><img src="ftv2vertline.png" alt="|" width="16" height="22" /><img src="ftv2lastnode.png" alt="\" width="16" height="22" /><a class="el" href="group__MathFunctionsMisc.html" target="_self">Misc functions</a></td><td class="desc">Math functions </td></tr>
<tr id="row_4_"><td class="entry"><img id="arr_4_" src="ftv2mnode.png" alt="o" width="16" height="22" onclick="toggleFolder('4_')"/><a class="el" href="group__Kernel.html" target="_self">Kernel</a></td><td class="desc">Kernel datastructures </td></tr>
<tr id="row_4_0_" class="even"><td class="entry"><img src="ftv2vertline.png" alt="|" width="16" height="22" /><img src="ftv2node.png" alt="o" width="16" height="22" /><a class="el" href="group__ComparatorUtils.html" target="_self">ComparatorUtils</a></td><td class="desc">A collection of utilities for comparators </td></tr>
<tr id="row_4_1_"><td class="entry"><img src="ftv2vertline.png" alt="|" width="16" height="22" /><img src="ftv2lastnode.png" alt="\" width="16" height="22" /><a class="el" href="group__RangeUtils.html" target="_self">RangeUtils</a></td><td class="desc">Predicates for range operations </td></tr>
<tr id="row_5_" class="even"><td class="entry"><img id="arr_5_" src="ftv2mnode.png" alt="o" width="16" height="22" onclick="toggleFolder('5_')"/><a class="el" href="group__Format.html" target="_self">Format</a></td><td class="desc">IO classes </td></tr>
<tr id="row_5_0_"><td class="entry"><img src="ftv2vertline.png" alt="|" width="16" height="22" /><img src="ftv2node.png" alt="o" width="16" height="22" /><a class="el" href="group__FileIO.html" target="_self">File IO</a></td><td class="desc">File IO classes </td></tr>
<tr id="row_5_1_" class="even"><td class="entry"><img src="ftv2vertline.png" alt="|" width="16" height="22" /><img src="ftv2lastnode.png" alt="\" width="16" height="22" /><a class="el" href="group__DatabaseIO.html" target="_self">Database IO</a></td><td class="desc">Database IO classes </td></tr>
<tr id="row_6_"><td class="entry"><img src="ftv2node.png" alt="o" width="16" height="22" /><a class="el" href="group__Metadata.html" target="_self">Metadata</a></td><td class="desc">Classes that capture meta data about a MS or HPLC-MS experiment </td></tr>
<tr id="row_7_" class="even"><td class="entry"><img src="ftv2node.png" alt="o" width="16" height="22" /><a class="el" href="group__Chemistry.html" target="_self">Chemistry</a></td><td class="desc"></td></tr>
<tr id="row_8_"><td class="entry"><img src="ftv2node.png" alt="o" width="16" height="22" /><a class="el" href="group__SpectraComparison.html" target="_self">Spectrum Comparison</a></td><td class="desc">The classes within this group are used to compare single spectra, by reporting a similarity value </td></tr>
<tr id="row_9_" class="even"><td class="entry"><img id="arr_9_" src="ftv2mnode.png" alt="o" width="16" height="22" onclick="toggleFolder('9_')"/><a class="el" href="group__Filtering.html" target="_self">Spectrum filters</a></td><td class="desc">This group contains filtering classes for spectra </td></tr>
<tr id="row_9_0_"><td class="entry"><img src="ftv2vertline.png" alt="|" width="16" height="22" /><img src="ftv2node.png" alt="o" width="16" height="22" /><a class="el" href="group__SpectraPreprocessers.html" target="_self">Spectra Preprocessors</a></td><td class="desc">The spectra preprocessors filter the spectra with different criterions </td></tr>
<tr id="row_9_1_" class="even"><td class="entry"><img src="ftv2vertline.png" alt="|" width="16" height="22" /><img src="ftv2node.png" alt="o" width="16" height="22" /><a class="el" href="group__SpectraFilter.html" target="_self">Spectra Filters</a></td><td class="desc">Spectra filters report single values of spectra e.g. the TIC </td></tr>
<tr id="row_9_2_"><td class="entry"><img src="ftv2vertline.png" alt="|" width="16" height="22" /><img src="ftv2lastnode.png" alt="\" width="16" height="22" /><a class="el" href="group__PeakMarker.html" target="_self">Peak Marker</a></td><td class="desc">These classes mark peaks according to different criterions </td></tr>
<tr id="row_10_" class="even"><td class="entry"><img id="arr_10_" src="ftv2mnode.png" alt="o" width="16" height="22" onclick="toggleFolder('10_')"/><a class="el" href="group__Analysis.html" target="_self">Analysis</a></td><td class="desc">High-level analysis like PeakPicking, Quantitation, Identification, MapAlginment </td></tr>
<tr id="row_10_0_"><td class="entry"><img src="ftv2vertline.png" alt="|" width="16" height="22" /><img src="ftv2node.png" alt="o" width="16" height="22" /><a class="el" href="group__SignalProcessing.html" target="_self">SignalProcessing</a></td><td class="desc">Signal processing classes (noise estimation, noise filters, basline filters) </td></tr>
<tr id="row_10_1_" class="even"><td class="entry"><img src="ftv2vertline.png" alt="|" width="16" height="22" /><img src="ftv2node.png" alt="o" width="16" height="22" /><a class="el" href="group__PeakPicking.html" target="_self">PeakPicking</a></td><td class="desc">Classes for the transformation of raw ms data into peak data </td></tr>
<tr id="row_10_2_"><td class="entry"><img src="ftv2vertline.png" alt="|" width="16" height="22" /><img src="ftv2node.png" alt="o" width="16" height="22" /><a class="el" href="group__FeatureFinder.html" target="_self">FeatureFinder</a></td><td class="desc">The feature detection algorithms </td></tr>
<tr id="row_10_3_" class="even"><td class="entry"><img src="ftv2vertline.png" alt="|" width="16" height="22" /><img src="ftv2node.png" alt="o" width="16" height="22" /><a class="el" href="group__MapAlignment.html" target="_self">MapAlignment</a></td><td class="desc">The map alignment algorithms </td></tr>
<tr id="row_10_4_"><td class="entry"><img src="ftv2vertline.png" alt="|" width="16" height="22" /><img src="ftv2node.png" alt="o" width="16" height="22" /><a class="el" href="group__FeatureGrouping.html" target="_self">FeatureGrouping</a></td><td class="desc">The feature grouping </td></tr>
<tr id="row_10_5_" class="even"><td class="entry"><img src="ftv2vertline.png" alt="|" width="16" height="22" /><img src="ftv2node.png" alt="o" width="16" height="22" /><a class="el" href="group__Analysis__ID.html" target="_self">Identification</a></td><td class="desc">Protein and peptide identitfication classes </td></tr>
<tr id="row_10_6_"><td class="entry"><img src="ftv2vertline.png" alt="|" width="16" height="22" /><img src="ftv2lastnode.png" alt="\" width="16" height="22" /><a class="el" href="group__SpectraClustering.html" target="_self">Clustering</a></td><td class="desc">This class contains SpectraClustering classes These classes are components for clustering all kinds of data for which a distance relation, normalizable in the range of [0,1], is available. Mainly this will be data for which there is a corresponding CompareFunctor given (e.g. PeakSpectrum) that is yielding the similarity normalized in the range of [0,1] of such two elements, so it can easily converted to the needed distances </td></tr>
<tr id="row_11_" class="even"><td class="entry"><img id="arr_11_" src="ftv2mnode.png" alt="o" width="16" height="22" onclick="toggleFolder('11_')"/><a class="el" href="group__Visual.html" target="_self">Visual</a></td><td class="desc">Visualization classes </td></tr>
<tr id="row_11_0_"><td class="entry"><img src="ftv2vertline.png" alt="|" width="16" height="22" /><img src="ftv2node.png" alt="o" width="16" height="22" /><a class="el" href="group__SpectrumWidgets.html" target="_self">Spectrum visualizaion widgets</a></td><td class="desc">Spectrum visualization widgets </td></tr>
<tr id="row_11_1_" class="even"><td class="entry"><img src="ftv2vertline.png" alt="|" width="16" height="22" /><img src="ftv2node.png" alt="o" width="16" height="22" /><a class="el" href="group__TOPPView__elements.html" target="_self">TOPPView</a></td><td class="desc">GUI elements for TOPPView </td></tr>
<tr id="row_11_2_"><td class="entry"><img src="ftv2vertline.png" alt="|" width="16" height="22" /><img src="ftv2node.png" alt="o" width="16" height="22" /><a class="el" href="group__TOPPAS__elements.html" target="_self">TOPPAS</a></td><td class="desc">GUI elements for TOPPAS </td></tr>
<tr id="row_11_3_" class="even"><td class="entry"><img src="ftv2vertline.png" alt="|" width="16" height="22" /><img src="ftv2lastnode.png" alt="\" width="16" height="22" /><a class="el" href="group__Dialogs.html" target="_self">Dialogs</a></td><td class="desc">Dialogs for user interaction </td></tr>
<tr id="row_12_"><td class="entry"><img src="ftv2lastnode.png" alt="\" width="16" height="22" /><a class="el" href="group__Simulation.html" target="_self">Simulation</a></td><td class="desc">Simulation classes </td></tr>
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<TD><font color="#c0c0c0">OpenMS / TOPP release 1.11.1</font></TD>
<TD align="right"><font color="#c0c0c0">Documentation generated on Thu Nov 14 2013 11:20:58 using doxygen 1.8.5</font></TD>
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