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<HTML>
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<TITLE>OpenMS::Internal Namespace Reference</TITLE>
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<li class="navelem"><a class="el" href="namespaceOpenMS.html">OpenMS</a></li><li class="navelem"><a class="el" href="namespaceOpenMS_1_1Internal.html">Internal</a></li> </ul>
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<div class="title">OpenMS::Internal Namespace Reference</div> </div>
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<p>Namespace used to hide implementation details from users.
<a href="#details">More...</a></p>
<table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="namespaces"></a>
Namespaces</h2></td></tr>
<tr class="memitem:namespaceOpenMS_1_1Internal_1_1ClassTest"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="namespaceOpenMS_1_1Internal_1_1ClassTest.html">ClassTest</a></td></tr>
<tr class="memdesc:namespaceOpenMS_1_1Internal_1_1ClassTest"><td class="mdescLeft"> </td><td class="mdescRight">Namespace for class tests. <br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
</table><table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="nested-classes"></a>
Classes</h2></td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1DIntervalBase.html">DIntervalBase</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">A base class for D-dimensional interval. <a href="classOpenMS_1_1Internal_1_1DIntervalBase.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct  </td><td class="memItemRight" valign="bottom"><a class="el" href="structOpenMS_1_1Internal_1_1FileMapping.html">FileMapping</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">Maps input/output files to filenames for the external program. <a href="structOpenMS_1_1Internal_1_1FileMapping.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct  </td><td class="memItemRight" valign="bottom"><a class="el" href="structOpenMS_1_1Internal_1_1MappingParam.html">MappingParam</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">Filename mappings for all input/output files. <a href="structOpenMS_1_1Internal_1_1MappingParam.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct  </td><td class="memItemRight" valign="bottom"><a class="el" href="structOpenMS_1_1Internal_1_1ToolDescriptionInternal.html">ToolDescriptionInternal</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="structOpenMS_1_1Internal_1_1ToolDescription.html">ToolDescription</a> Class. <a href="structOpenMS_1_1Internal_1_1ToolDescriptionInternal.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct  </td><td class="memItemRight" valign="bottom"><a class="el" href="structOpenMS_1_1Internal_1_1ToolExternalDetails.html">ToolExternalDetails</a></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct  </td><td class="memItemRight" valign="bottom"><a class="el" href="structOpenMS_1_1Internal_1_1ToolDescription.html">ToolDescription</a></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1IntensityIteratorWrapper.html">IntensityIteratorWrapper</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">An iterator wrapper to access peak intensities instead of the peak itself. <a href="classOpenMS_1_1Internal_1_1IntensityIteratorWrapper.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1AcqusHandler.html">AcqusHandler</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">Read-only acqus <a class="el" href="classOpenMS_1_1File.html" title="Basic file handling operations. ">File</a> handler for XMass Analysis. <a href="classOpenMS_1_1Internal_1_1AcqusHandler.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1FidHandler.html">FidHandler</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">Read-only fid <a class="el" href="classOpenMS_1_1File.html" title="Basic file handling operations. ">File</a> handler for XMass Analysis. <a href="classOpenMS_1_1Internal_1_1FidHandler.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1MascotXMLHandler.html">MascotXMLHandler</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">Handler that is used for parsing MascotXML data. <a href="classOpenMS_1_1Internal_1_1MascotXMLHandler.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1MzDataHandler.html">MzDataHandler</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">XML handler for <a class="el" href="classOpenMS_1_1MzDataFile.html" title="File adapter for MzData files. ">MzDataFile</a>. <a href="classOpenMS_1_1Internal_1_1MzDataHandler.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1MzIdentMLHandler.html">MzIdentMLHandler</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">XML handler for <a class="el" href="classOpenMS_1_1MzIdentMLFile.html" title="File adapter for MzIdentML files. ">MzIdentMLFile</a>. <a href="classOpenMS_1_1Internal_1_1MzIdentMLHandler.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1MzMLHandler.html">MzMLHandler</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">XML handler for <a class="el" href="classOpenMS_1_1MzMLFile.html" title="File adapter for MzML files. ">MzMLFile</a>. <a href="classOpenMS_1_1Internal_1_1MzMLHandler.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1MzQuantMLHandler.html">MzQuantMLHandler</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">XML handler for <a class="el" href="classOpenMS_1_1MzQuantMLFile.html" title="File adapter for MzQuantML files. ">MzQuantMLFile</a>. <a href="classOpenMS_1_1Internal_1_1MzQuantMLHandler.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1MzXMLHandler.html">MzXMLHandler</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">XML handlers for <a class="el" href="classOpenMS_1_1MzXMLFile.html" title="File adapter for MzXML 2.1 files. ">MzXMLFile</a>. <a href="classOpenMS_1_1Internal_1_1MzXMLHandler.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1ParamXMLHandler.html">ParamXMLHandler</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">XML Handler for <a class="el" href="classOpenMS_1_1Param.html" title="Management and storage of parameters / INI files. ">Param</a> files. <a href="classOpenMS_1_1Internal_1_1ParamXMLHandler.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1PTMXMLHandler.html">PTMXMLHandler</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">Handler that is used for parsing PTMXML data. <a href="classOpenMS_1_1Internal_1_1PTMXMLHandler.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1ToolDescriptionHandler.html">ToolDescriptionHandler</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">XML handler for <a class="el" href="classOpenMS_1_1ToolDescriptionFile.html" title="File adapter for ToolDescriptor files. ">ToolDescriptionFile</a>. <a href="classOpenMS_1_1Internal_1_1ToolDescriptionHandler.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1TraMLHandler.html">TraMLHandler</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">XML handler for <a class="el" href="classOpenMS_1_1TraMLFile.html" title="File adapter for HUPO PSI TraML files. ">TraMLFile</a>. <a href="classOpenMS_1_1Internal_1_1TraMLHandler.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1UnimodXMLHandler.html">UnimodXMLHandler</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">Handler that is used for parsing XTandemXML data. <a href="classOpenMS_1_1Internal_1_1UnimodXMLHandler.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1StringManager.html">StringManager</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">Helper class for XML parsing that handles the memory management for conversions of Xerces strings. <a href="classOpenMS_1_1Internal_1_1StringManager.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html">XMLHandler</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">Base class for XML handlers. <a href="classOpenMS_1_1Internal_1_1XMLHandler.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct  </td><td class="memItemRight" valign="bottom"><a class="el" href="structOpenMS_1_1Internal_1_1XTandemInfileNote.html">XTandemInfileNote</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">Note representation of bioml structure used by XTandem. <a href="structOpenMS_1_1Internal_1_1XTandemInfileNote.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XTandemInfileXMLHandler.html">XTandemInfileXMLHandler</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">Handler that is used for parsing XTandemXML data. <a href="classOpenMS_1_1Internal_1_1XTandemInfileXMLHandler.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1MzDataValidator.html">MzDataValidator</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">Semantically validates MzXML files. <a href="classOpenMS_1_1Internal_1_1MzDataValidator.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1MzIdentMLValidator.html">MzIdentMLValidator</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">Semantically validates MzXML files. <a href="classOpenMS_1_1Internal_1_1MzIdentMLValidator.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1MzMLValidator.html">MzMLValidator</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">Semantically validates MzXML files. <a href="classOpenMS_1_1Internal_1_1MzMLValidator.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1MzQuantMLValidator.html">MzQuantMLValidator</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">Semantically validates MzQuantML files. <a href="classOpenMS_1_1Internal_1_1MzQuantMLValidator.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1SemanticValidator.html">SemanticValidator</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">Semantically validates XML files using <a class="el" href="classOpenMS_1_1CVMappings.html" title="Representation of controlled vocabulary mapping rules (for PSI formats) ">CVMappings</a> and a <a class="el" href="classOpenMS_1_1ControlledVocabulary.html" title="Representation of a controlled vocabulary. ">ControlledVocabulary</a>. <a href="classOpenMS_1_1Internal_1_1SemanticValidator.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1TraMLValidator.html">TraMLValidator</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">Semantically validates MzXML files. <a href="classOpenMS_1_1Internal_1_1TraMLValidator.html#details">More...</a><br/></td></tr>
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<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1XMLFile.html">XMLFile</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">Base class for loading/storing XML files that have a handler derived from <a class="el" href="classOpenMS_1_1Internal_1_1XMLHandler.html" title="Base class for XML handlers. ">XMLHandler</a>. <a href="classOpenMS_1_1Internal_1_1XMLFile.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1OpenMSXMLFormatTarget.html">OpenMSXMLFormatTarget</a></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1AreaIterator.html">AreaIterator</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">Forward iterator for an area of peaks in an experiment. <a href="classOpenMS_1_1Internal_1_1AreaIterator.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct  </td><td class="memItemRight" valign="bottom"><a class="el" href="structOpenMS_1_1Internal_1_1IntensityLess.html">IntensityLess</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">Comparator that allows to compare the indices of two peaks by their intensity. <a href="structOpenMS_1_1Internal_1_1IntensityLess.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct  </td><td class="memItemRight" valign="bottom"><a class="el" href="structOpenMS_1_1Internal_1_1IntensityIterator.html">IntensityIterator</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">Intensity iterator for a <a class="el" href="structOpenMS_1_1FeatureFinderDefs.html#af7439235b89a75354a2e87350e36834f" title="A set of peak indices. ">FeatureFinderDefs::IndexSet</a>. <a href="structOpenMS_1_1Internal_1_1IntensityIterator.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct  </td><td class="memItemRight" valign="bottom"><a class="el" href="structOpenMS_1_1Internal_1_1MzIterator.html">MzIterator</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">m/z iterator for a <a class="el" href="structOpenMS_1_1FeatureFinderDefs.html#af7439235b89a75354a2e87350e36834f" title="A set of peak indices. ">FeatureFinderDefs::IndexSet</a> <a href="structOpenMS_1_1Internal_1_1MzIterator.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct  </td><td class="memItemRight" valign="bottom"><a class="el" href="structOpenMS_1_1Internal_1_1RtIterator.html">RtIterator</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">Retention time iterator for a <a class="el" href="structOpenMS_1_1FeatureFinderDefs.html#af7439235b89a75354a2e87350e36834f" title="A set of peak indices. ">FeatureFinderDefs::IndexSet</a>. <a href="structOpenMS_1_1Internal_1_1RtIterator.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1Spectrum1DPrefDialog.html">Spectrum1DPrefDialog</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">Preferences dialog for <a class="el" href="classOpenMS_1_1Spectrum1DWidget.html" title="Widget for visualization of several spectra. ">Spectrum1DWidget</a>. <a href="classOpenMS_1_1Internal_1_1Spectrum1DPrefDialog.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1Spectrum2DPrefDialog.html">Spectrum2DPrefDialog</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">Preferences dialog for <a class="el" href="classOpenMS_1_1Spectrum2DWidget.html" title="Widget for 2D-visualization of peak map and feature map data. ">Spectrum2DWidget</a>. <a href="classOpenMS_1_1Internal_1_1Spectrum2DPrefDialog.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1Spectrum3DPrefDialog.html">Spectrum3DPrefDialog</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">Preferences dialog for <a class="el" href="classOpenMS_1_1Spectrum3DWidget.html" title="Widget for 3D-visualization of map data. ">Spectrum3DWidget</a>. <a href="classOpenMS_1_1Internal_1_1Spectrum3DPrefDialog.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1TOPPViewPrefDialog.html">TOPPViewPrefDialog</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">Preferences dialog for TOPPView. <a href="classOpenMS_1_1Internal_1_1TOPPViewPrefDialog.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1ListTable.html">ListTable</a></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1ListEditorDelegate.html">ListEditorDelegate</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="namespaceOpenMS_1_1Internal.html" title="Namespace used to hide implementation details from users. ">Internal</a> delegate class. <a href="classOpenMS_1_1Internal_1_1ListEditorDelegate.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1OpenMSLineEdit.html">OpenMSLineEdit</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">Custom <a class="el" href="classQLineEdit.html">QLineEdit</a> which emits a signal when losing focus (such that we can commit its data) <a href="classOpenMS_1_1Internal_1_1OpenMSLineEdit.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1ParamEditorDelegate.html">ParamEditorDelegate</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="namespaceOpenMS_1_1Internal.html" title="Namespace used to hide implementation details from users. ">Internal</a> delegate class for <a class="el" href="classQTreeWidget.html">QTreeWidget</a>. <a href="classOpenMS_1_1Internal_1_1ParamEditorDelegate.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1ParamTree.html">ParamTree</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="classQTreeWidget.html">QTreeWidget</a> that emits a signal whenever a new row is selected. <a href="classOpenMS_1_1Internal_1_1ParamTree.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct  </td><td class="memItemRight" valign="bottom"><a class="el" href="structOpenMS_1_1Internal_1_1OpenMSOSInfo.html">OpenMSOSInfo</a></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
</table><table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="enum-members"></a>
Enumerations</h2></td></tr>
<tr class="memitem:aca0dc77c7ce47168800290bae73e3196"><td class="memItemLeft" align="right" valign="top">enum  </td><td class="memItemRight" valign="bottom"><a class="el" href="namespaceOpenMS_1_1Internal.html#aca0dc77c7ce47168800290bae73e3196">OpenMS_OS</a> { <a class="el" href="namespaceOpenMS_1_1Internal.html#aca0dc77c7ce47168800290bae73e3196a4373651fe30f908a136602495f63f9d0">OS_UNKNOWN</a>,
<a class="el" href="namespaceOpenMS_1_1Internal.html#aca0dc77c7ce47168800290bae73e3196af1b08c91685e3bc4d30e56dfd468e735">OS_MACOS</a>,
<a class="el" href="namespaceOpenMS_1_1Internal.html#aca0dc77c7ce47168800290bae73e3196a8780f81c6157f670aaa1d4a0f7c15467">OS_WINDOWS</a>,
<a class="el" href="namespaceOpenMS_1_1Internal.html#aca0dc77c7ce47168800290bae73e3196ac3724e0358f391346c785d3450532797">OS_LINUX</a>
}</td></tr>
<tr class="separator:aca0dc77c7ce47168800290bae73e3196"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a6b7b901027432042c65497df60baa6cd"><td class="memItemLeft" align="right" valign="top">enum  </td><td class="memItemRight" valign="bottom"><a class="el" href="namespaceOpenMS_1_1Internal.html#a6b7b901027432042c65497df60baa6cd">OpenMS_Architecture</a> { <a class="el" href="namespaceOpenMS_1_1Internal.html#a6b7b901027432042c65497df60baa6cda075b5c0f90e881932f7b10edaef2046d">ARCH_UNKOWN</a>,
<a class="el" href="namespaceOpenMS_1_1Internal.html#a6b7b901027432042c65497df60baa6cdafe2686bbc657ac8741199af24b27897d">ARCH_32BIT</a>,
<a class="el" href="namespaceOpenMS_1_1Internal.html#a6b7b901027432042c65497df60baa6cdaa944f0a89cfdb71ec899930b9eab0a3a">ARCH_64BIT</a>
}</td></tr>
<tr class="separator:a6b7b901027432042c65497df60baa6cd"><td class="memSeparator" colspan="2"> </td></tr>
</table><table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="func-members"></a>
Functions</h2></td></tr>
<tr class="memitem:a6193961c4f72625df769be5d1cfd24fd"><td class="memItemLeft" align="right" valign="top">bool </td><td class="memItemRight" valign="bottom"><a class="el" href="namespaceOpenMS_1_1Internal.html#a6193961c4f72625df769be5d1cfd24fd">PermutScoreComparator</a> (const <a class="el" href="classOpenMS_1_1CompNovoIdentificationBase_1_1Permut.html">CompNovoIdentificationBase::Permut</a> &p1, const <a class="el" href="classOpenMS_1_1CompNovoIdentificationBase_1_1Permut.html">CompNovoIdentificationBase::Permut</a> &p2)</td></tr>
<tr class="separator:a6193961c4f72625df769be5d1cfd24fd"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a5c803e9b63a16a5ba6cbd7c8b2ac1d60"><td class="memTemplParams" colspan="2">template<UInt D> </td></tr>
<tr class="memitem:a5c803e9b63a16a5ba6cbd7c8b2ac1d60"><td class="memTemplItemLeft" align="right" valign="top">std::ostream & </td><td class="memTemplItemRight" valign="bottom"><a class="el" href="namespaceOpenMS_1_1Internal.html#a5c803e9b63a16a5ba6cbd7c8b2ac1d60">operator<<</a> (std::ostream &os, const <a class="el" href="classOpenMS_1_1Internal_1_1DIntervalBase.html">DIntervalBase</a>< D > &rhs)</td></tr>
<tr class="memdesc:a5c803e9b63a16a5ba6cbd7c8b2ac1d60"><td class="mdescLeft"> </td><td class="mdescRight">Print the contents to a stream. <a href="#a5c803e9b63a16a5ba6cbd7c8b2ac1d60">More...</a><br/></td></tr>
<tr class="separator:a5c803e9b63a16a5ba6cbd7c8b2ac1d60"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:ad96ef0a342e1fe2b0234d3c777fdc423"><td class="memTemplParams" colspan="2">template<typename IteratorT > </td></tr>
<tr class="memitem:ad96ef0a342e1fe2b0234d3c777fdc423"><td class="memTemplItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1Internal_1_1IntensityIteratorWrapper.html">IntensityIteratorWrapper</a><br class="typebreak"/>
< IteratorT > </td><td class="memTemplItemRight" valign="bottom"><a class="el" href="namespaceOpenMS_1_1Internal.html#ad96ef0a342e1fe2b0234d3c777fdc423">intensityIteratorWrapper</a> (const IteratorT &rhs)</td></tr>
<tr class="memdesc:ad96ef0a342e1fe2b0234d3c777fdc423"><td class="mdescLeft"> </td><td class="mdescRight">make-function so that we need no write out all those type names to get the wrapped iterator. <a href="#ad96ef0a342e1fe2b0234d3c777fdc423">More...</a><br/></td></tr>
<tr class="separator:ad96ef0a342e1fe2b0234d3c777fdc423"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:aea9b06324f4cd8fa4405226beecd811c"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="namespaceOpenMS_1_1Internal.html#aea9b06324f4cd8fa4405226beecd811c">writeXMLEscape</a> (const <a class="el" href="classOpenMS_1_1String.html">String</a> &to_escape, std::ostream &os)</td></tr>
<tr class="memdesc:aea9b06324f4cd8fa4405226beecd811c"><td class="mdescLeft"> </td><td class="mdescRight">Escapes a string to be storable into an XML <a class="el" href="classOpenMS_1_1File.html" title="Basic file handling operations. ">File</a>. <a href="#aea9b06324f4cd8fa4405226beecd811c">More...</a><br/></td></tr>
<tr class="separator:aea9b06324f4cd8fa4405226beecd811c"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a60d063fb2a7cce735ab6e17eb574d4b6"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1String.html">String</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="namespaceOpenMS_1_1Internal.html#a60d063fb2a7cce735ab6e17eb574d4b6">writeXMLEscape</a> (const <a class="el" href="classOpenMS_1_1String.html">String</a> &to_escape)</td></tr>
<tr class="memdesc:a60d063fb2a7cce735ab6e17eb574d4b6"><td class="mdescLeft"> </td><td class="mdescRight">Escapes a string and returns the escaped string. <a href="#a60d063fb2a7cce735ab6e17eb574d4b6">More...</a><br/></td></tr>
<tr class="separator:a60d063fb2a7cce735ab6e17eb574d4b6"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a6b546cad2e0ac048e9a289b1f55e65cf"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1String.html">String</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="namespaceOpenMS_1_1Internal.html#a6b546cad2e0ac048e9a289b1f55e65cf">encodeTab</a> (const <a class="el" href="classOpenMS_1_1String.html">String</a> &to_encode)</td></tr>
<tr class="memdesc:a6b546cad2e0ac048e9a289b1f55e65cf"><td class="mdescLeft"> </td><td class="mdescRight">Encodes tabs '' in the string as &#x9; and returns the encoded string. <a href="#a6b546cad2e0ac048e9a289b1f55e65cf">More...</a><br/></td></tr>
<tr class="separator:a6b546cad2e0ac048e9a289b1f55e65cf"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a67dbb022f331a04ccabc19e483868e45"><td class="memItemLeft" align="right" valign="top">static <a class="el" href="structOpenMS_1_1Internal_1_1OpenMSOSInfo.html">OpenMSOSInfo</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="namespaceOpenMS_1_1Internal.html#a67dbb022f331a04ccabc19e483868e45">getOSInfo</a> ()</td></tr>
<tr class="separator:a67dbb022f331a04ccabc19e483868e45"><td class="memSeparator" colspan="2"> </td></tr>
</table><table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="var-members"></a>
Variables</h2></td></tr>
<tr class="memitem:a029fc5228ffc36952af3488b8da9994e"><td class="memItemLeft" align="right" valign="top">const char * </td><td class="memItemRight" valign="bottom"><a class="el" href="namespaceOpenMS_1_1Internal.html#a029fc5228ffc36952af3488b8da9994e">OpenMS_locale</a></td></tr>
<tr class="separator:a029fc5228ffc36952af3488b8da9994e"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a3ae1afc71ffd8d4b091615c4ff72e496"><td class="memItemLeft" align="right" valign="top">std::string </td><td class="memItemRight" valign="bottom"><a class="el" href="namespaceOpenMS_1_1Internal.html#a3ae1afc71ffd8d4b091615c4ff72e496">OpenMS_OSNames</a> [] = {"unkown", "MacOS", "Windows", "Linux"}</td></tr>
<tr class="separator:a3ae1afc71ffd8d4b091615c4ff72e496"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a949d405b132a4732a053652bdebde4f1"><td class="memItemLeft" align="right" valign="top">std::string </td><td class="memItemRight" valign="bottom"><a class="el" href="namespaceOpenMS_1_1Internal.html#a949d405b132a4732a053652bdebde4f1">OpenMS_ArchNames</a> [] = {"unkown", "32bit", "64bit"}</td></tr>
<tr class="separator:a949d405b132a4732a053652bdebde4f1"><td class="memSeparator" colspan="2"> </td></tr>
</table>
<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
<div class="textblock"><p>Namespace used to hide implementation details from users. </p>
</div><h2 class="groupheader">Enumeration Type Documentation</h2>
<a class="anchor" id="a6b7b901027432042c65497df60baa6cd"></a>
<div class="memitem">
<div class="memproto">
<table class="memname">
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<td class="memname">enum <a class="el" href="namespaceOpenMS_1_1Internal.html#a6b7b901027432042c65497df60baa6cd">OpenMS_Architecture</a></td>
</tr>
</table>
</div><div class="memdoc">
<table class="fieldtable">
<tr><th colspan="2">Enumerator</th></tr><tr><td class="fieldname"><em><a class="anchor" id="a6b7b901027432042c65497df60baa6cda075b5c0f90e881932f7b10edaef2046d"></a>ARCH_UNKOWN</em> </td><td class="fielddoc">
</td></tr>
<tr><td class="fieldname"><em><a class="anchor" id="a6b7b901027432042c65497df60baa6cdafe2686bbc657ac8741199af24b27897d"></a>ARCH_32BIT</em> </td><td class="fielddoc">
</td></tr>
<tr><td class="fieldname"><em><a class="anchor" id="a6b7b901027432042c65497df60baa6cdaa944f0a89cfdb71ec899930b9eab0a3a"></a>ARCH_64BIT</em> </td><td class="fielddoc">
</td></tr>
</table>
</div>
</div>
<a class="anchor" id="aca0dc77c7ce47168800290bae73e3196"></a>
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">enum <a class="el" href="namespaceOpenMS_1_1Internal.html#aca0dc77c7ce47168800290bae73e3196">OpenMS_OS</a></td>
</tr>
</table>
</div><div class="memdoc">
<table class="fieldtable">
<tr><th colspan="2">Enumerator</th></tr><tr><td class="fieldname"><em><a class="anchor" id="aca0dc77c7ce47168800290bae73e3196a4373651fe30f908a136602495f63f9d0"></a>OS_UNKNOWN</em> </td><td class="fielddoc">
</td></tr>
<tr><td class="fieldname"><em><a class="anchor" id="aca0dc77c7ce47168800290bae73e3196af1b08c91685e3bc4d30e56dfd468e735"></a>OS_MACOS</em> </td><td class="fielddoc">
</td></tr>
<tr><td class="fieldname"><em><a class="anchor" id="aca0dc77c7ce47168800290bae73e3196a8780f81c6157f670aaa1d4a0f7c15467"></a>OS_WINDOWS</em> </td><td class="fielddoc">
</td></tr>
<tr><td class="fieldname"><em><a class="anchor" id="aca0dc77c7ce47168800290bae73e3196ac3724e0358f391346c785d3450532797"></a>OS_LINUX</em> </td><td class="fielddoc">
</td></tr>
</table>
</div>
</div>
<h2 class="groupheader">Function Documentation</h2>
<a class="anchor" id="a6b546cad2e0ac048e9a289b1f55e65cf"></a>
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<div class="memproto">
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<td class="memname"><a class="el" href="classOpenMS_1_1String.html">String</a> OpenMS::Internal::encodeTab </td>
<td>(</td>
<td class="paramtype">const String & </td>
<td class="paramname"><em>to_encode</em></td><td>)</td>
<td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Encodes tabs '' in the string as &#x9; and returns the encoded string. </p>
<dl class="params"><dt>Parameters</dt><dd>
<table class="params">
<tr><td class="paramname">to_encode</td><td>The <a class="el" href="classOpenMS_1_1String.html" title="A more convenient string class. ">String</a> to encode. </td></tr>
</table>
</dd>
</dl>
<dl class="section return"><dt>Returns</dt><dd>The encoded string. </dd></dl>
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<td class="memname">static <a class="el" href="structOpenMS_1_1Internal_1_1OpenMSOSInfo.html">OpenMSOSInfo</a> OpenMS::Internal::getOSInfo </td>
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<p>References <a class="el" href="structOpenMS_1_1Internal_1_1OpenMSOSInfo.html#a4521f885797e10482e45dc30d6b576f7">OpenMSOSInfo::arch</a>, <a class="el" href="namespaceOpenMS_1_1Internal.html#a6b7b901027432042c65497df60baa6cdafe2686bbc657ac8741199af24b27897d">ARCH_32BIT</a>, <a class="el" href="namespaceOpenMS_1_1Internal.html#a6b7b901027432042c65497df60baa6cdaa944f0a89cfdb71ec899930b9eab0a3a">ARCH_64BIT</a>, <a class="el" href="structOpenMS_1_1Internal_1_1OpenMSOSInfo.html#a06a3cf0e65abd37ccbd9ddd7c49d883e">OpenMSOSInfo::os</a>, <a class="el" href="namespaceOpenMS_1_1Internal.html#aca0dc77c7ce47168800290bae73e3196ac3724e0358f391346c785d3450532797">OS_LINUX</a>, <a class="el" href="namespaceOpenMS_1_1Internal.html#aca0dc77c7ce47168800290bae73e3196af1b08c91685e3bc4d30e56dfd468e735">OS_MACOS</a>, <a class="el" href="structOpenMS_1_1Internal_1_1OpenMSOSInfo.html#af2b84d47e89c7f391db5f1ca353a49f2">OpenMSOSInfo::os_version</a>, and <a class="el" href="namespaceOpenMS_1_1Internal.html#aca0dc77c7ce47168800290bae73e3196a8780f81c6157f670aaa1d4a0f7c15467">OS_WINDOWS</a>.</p>
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<td class="memname"><a class="el" href="classOpenMS_1_1Internal_1_1IntensityIteratorWrapper.html">IntensityIteratorWrapper</a><IteratorT> OpenMS::Internal::intensityIteratorWrapper </td>
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<p>make-function so that we need no write out all those type names to get the wrapped iterator. </p>
<p>Referenced by <a class="el" href="classOpenMS_1_1MorphologicalFilter.html#ab978eb8c2316573b1753199c8af2b041">MorphologicalFilter::filter()</a>.</p>
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<p>Print the contents to a stream. </p>
<p>References <a class="el" href="classOpenMS_1_1Internal_1_1DIntervalBase.html#a84873a73e9e222a574dccff3bc2d860e">DIntervalBase< D >::minPosition()</a>.</p>
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<td class="memname">void OpenMS::Internal::writeXMLEscape </td>
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<p>Escapes a string to be storable into an XML <a class="el" href="classOpenMS_1_1File.html" title="Basic file handling operations. ">File</a>. </p>
<p>Some characters must be escaped which are allowed in user params. E.g. > and & are not in XML and need to be escaped. Parsing those escaped strings is automatically done by xerces </p>
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<td class="memname"><a class="el" href="classOpenMS_1_1String.html">String</a> OpenMS::Internal::writeXMLEscape </td>
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<p>Escapes a string and returns the escaped string. </p>
<p>Some characters must be escaped which are allowed in user params. E.g. > and & are not in XML and need to be escaped. Parsing those escaped strings is automatically done by xerces </p>
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<h2 class="groupheader">Variable Documentation</h2>
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<td class="memname">std::string OpenMS_ArchNames[] = {"unkown", "32bit", "64bit"}</td>
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<p>Referenced by <a class="el" href="structOpenMS_1_1Internal_1_1OpenMSOSInfo.html#a31f09bd3747377bec7ae17cf215c87f2">OpenMSOSInfo::getArchAsString()</a>.</p>
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<p>Used to set the locale to "C", to avoid problems on machines with incompatible locale settings (this overwrites the locale setting of the environment!) </p>
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<td class="memname">std::string OpenMS_OSNames[] = {"unkown", "MacOS", "Windows", "Linux"}</td>
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<p>Referenced by <a class="el" href="structOpenMS_1_1Internal_1_1OpenMSOSInfo.html#a5f461492f42b29df8e9a76eadc2541ea">OpenMSOSInfo::getOSAsString()</a>.</p>
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<TD><font color="#c0c0c0">OpenMS / TOPP release 1.11.1</font></TD>
<TD align="right"><font color="#c0c0c0">Documentation generated on Thu Nov 14 2013 11:19:37 using doxygen 1.8.5</font></TD>
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