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<HTML>
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<TITLE>seqan Namespace Reference</TITLE>
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<div class="title">seqan Namespace Reference</div>  </div>
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<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="nested-classes"></a>
Classes</h2></td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structseqan_1_1FoundProteinFunctor.html">FoundProteinFunctor</a></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structseqan_1_1SAValue_3_01Index_3_01StringSet_3_01Peptide_01_4_00_01IndexWotd_3_4_01_4_01_4.html">SAValue&lt; Index&lt; StringSet&lt; Peptide &gt;, IndexWotd&lt;&gt; &gt; &gt;</a></td></tr>
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<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structseqan_1_1EquivalenceClassAA__.html">EquivalenceClassAA_</a></td></tr>
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Functions</h2></td></tr>
<tr class="memitem:a3edf155785de4517433ad049398fa418"><td class="memTemplParams" colspan="2">template&lt;bool enumerateA, bool enumerateB, typename TOnFoundFunctor , typename TTreeIteratorA , typename TIterPosA , typename TTreeIteratorB , typename TIterPosB , typename TErrors &gt; </td></tr>
<tr class="memitem:a3edf155785de4517433ad049398fa418"><td class="memTemplItemLeft" align="right" valign="top">void&#160;</td><td class="memTemplItemRight" valign="bottom"><a class="el" href="namespaceseqan.html#a3edf155785de4517433ad049398fa418">_approximateAminoAcidTreeSearch</a> (TOnFoundFunctor &amp;onFoundFunctor, TTreeIteratorA iterA, TIterPosA iterPosA, TTreeIteratorB iterB_, TIterPosB iterPosB, TErrors errorsLeft, TErrors classErrorsLeft)</td></tr>
<tr class="separator:a3edf155785de4517433ad049398fa418"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a02b69f3c44d2505ee79ff1f3d491bbbb"><td class="memTemplParams" colspan="2">template&lt;typename TEquivalenceTable &gt; </td></tr>
<tr class="memitem:a02b69f3c44d2505ee79ff1f3d491bbbb"><td class="memTemplItemLeft" align="right" valign="top">bool&#160;</td><td class="memTemplItemRight" valign="bottom"><a class="el" href="namespaceseqan.html#a02b69f3c44d2505ee79ff1f3d491bbbb">_charComparator</a> (AminoAcid charA, AminoAcid charB, TEquivalenceTable equivalence)</td></tr>
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<h2 class="groupheader">Function Documentation</h2>
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          <td class="memname">void seqan::_approximateAminoAcidTreeSearch </td>
          <td>(</td>
          <td class="paramtype">TOnFoundFunctor &amp;&#160;</td>
          <td class="paramname"><em>onFoundFunctor</em>, </td>
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          <td class="paramkey"></td>
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          <td class="paramtype">TTreeIteratorA&#160;</td>
          <td class="paramname"><em>iterA</em>, </td>
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          <td class="paramkey"></td>
          <td></td>
          <td class="paramtype">TIterPosA&#160;</td>
          <td class="paramname"><em>iterPosA</em>, </td>
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          <td class="paramkey"></td>
          <td></td>
          <td class="paramtype">TTreeIteratorB&#160;</td>
          <td class="paramname"><em>iterB_</em>, </td>
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          <td class="paramkey"></td>
          <td></td>
          <td class="paramtype">TIterPosB&#160;</td>
          <td class="paramname"><em>iterPosB</em>, </td>
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          <td class="paramkey"></td>
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          <td class="paramtype">TErrors&#160;</td>
          <td class="paramname"><em>errorsLeft</em>, </td>
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          <td class="paramkey"></td>
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          <td class="paramtype">TErrors&#160;</td>
          <td class="paramname"><em>classErrorsLeft</em>&#160;</td>
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          <td>)</td>
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<p>References <a class="el" href="namespaceseqan.html#a02b69f3c44d2505ee79ff1f3d491bbbb">_charComparator()</a>.</p>

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          <td class="memname">bool seqan::_charComparator </td>
          <td>(</td>
          <td class="paramtype">AminoAcid&#160;</td>
          <td class="paramname"><em>charA</em>, </td>
        </tr>
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          <td class="paramkey"></td>
          <td></td>
          <td class="paramtype">AminoAcid&#160;</td>
          <td class="paramname"><em>charB</em>, </td>
        </tr>
        <tr>
          <td class="paramkey"></td>
          <td></td>
          <td class="paramtype">TEquivalenceTable&#160;</td>
          <td class="paramname"><em>equivalence</em>&#160;</td>
        </tr>
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          <td></td>
          <td>)</td>
          <td></td><td></td>
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<p>Referenced by <a class="el" href="namespaceseqan.html#a3edf155785de4517433ad049398fa418">_approximateAminoAcidTreeSearch()</a>.</p>

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<TD><font color="#c0c0c0">OpenMS / TOPP release 1.11.1</font></TD>
<TD align="right"><font color="#c0c0c0">Documentation generated on Thu Nov 14 2013 11:19:38 using doxygen 1.8.5</font></TD>
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