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<TITLE>FeatureFinderAlgorithmPickedHelperStructs::TheoreticalIsotopePattern Struct Reference</TITLE>
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<div class="title">FeatureFinderAlgorithmPickedHelperStructs::TheoreticalIsotopePattern Struct Reference</div> </div>
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<p>Helper structure for a theoretical isotope pattern used in <a class="el" href="classOpenMS_1_1FeatureFinderAlgorithmPicked.html" title="FeatureFinderAlgorithm for picked peaks. ">FeatureFinderAlgorithmPicked</a>.
<a href="structOpenMS_1_1FeatureFinderAlgorithmPickedHelperStructs_1_1TheoreticalIsotopePattern.html#details">More...</a></p>
<p><code>#include <<a class="el" href="FeatureFinderAlgorithmPickedHelperStructs_8h_source.html">OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h</a>></code></p>
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<tr class="memitem:a9d78a687cf2a391198bb3cbc08bc06cb"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="structOpenMS_1_1FeatureFinderAlgorithmPickedHelperStructs_1_1TheoreticalIsotopePattern.html#a9d78a687cf2a391198bb3cbc08bc06cb">size</a> () const </td></tr>
<tr class="memdesc:a9d78a687cf2a391198bb3cbc08bc06cb"><td class="mdescLeft"> </td><td class="mdescRight">Returns the size. <a href="#a9d78a687cf2a391198bb3cbc08bc06cb">More...</a><br/></td></tr>
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Public Attributes</h2></td></tr>
<tr class="memitem:ac102a03577b6512164d6e4ff3cf78df0"><td class="memItemLeft" align="right" valign="top">std::vector< <a class="el" href="group__Concept.html#gace75bfb1aba684e874dffee13738bd15">DoubleReal</a> > </td><td class="memItemRight" valign="bottom"><a class="el" href="structOpenMS_1_1FeatureFinderAlgorithmPickedHelperStructs_1_1TheoreticalIsotopePattern.html#ac102a03577b6512164d6e4ff3cf78df0">intensity</a></td></tr>
<tr class="memdesc:ac102a03577b6512164d6e4ff3cf78df0"><td class="mdescLeft"> </td><td class="mdescRight">Vector of intensity contributions. <a href="#ac102a03577b6512164d6e4ff3cf78df0">More...</a><br/></td></tr>
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<tr class="memitem:af2e76e2f5a4b1549e43a4dac9a3c35c2"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="structOpenMS_1_1FeatureFinderAlgorithmPickedHelperStructs_1_1TheoreticalIsotopePattern.html#af2e76e2f5a4b1549e43a4dac9a3c35c2">optional_begin</a></td></tr>
<tr class="memdesc:af2e76e2f5a4b1549e43a4dac9a3c35c2"><td class="mdescLeft"> </td><td class="mdescRight">Number of optional peaks at the beginning of the pattern. <a href="#af2e76e2f5a4b1549e43a4dac9a3c35c2">More...</a><br/></td></tr>
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<tr class="memitem:a511873304a043cc9222285de3a2c2913"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="structOpenMS_1_1FeatureFinderAlgorithmPickedHelperStructs_1_1TheoreticalIsotopePattern.html#a511873304a043cc9222285de3a2c2913">optional_end</a></td></tr>
<tr class="memdesc:a511873304a043cc9222285de3a2c2913"><td class="mdescLeft"> </td><td class="mdescRight">Number of optional peaks at the end of the pattern. <a href="#a511873304a043cc9222285de3a2c2913">More...</a><br/></td></tr>
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<tr class="memitem:a22e8cde44cef1cd6e10cb313348feacb"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__Concept.html#gace75bfb1aba684e874dffee13738bd15">DoubleReal</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="structOpenMS_1_1FeatureFinderAlgorithmPickedHelperStructs_1_1TheoreticalIsotopePattern.html#a22e8cde44cef1cd6e10cb313348feacb">max</a></td></tr>
<tr class="memdesc:a22e8cde44cef1cd6e10cb313348feacb"><td class="mdescLeft"> </td><td class="mdescRight">The maximum intensity contribution before scaling the pattern to 1. <a href="#a22e8cde44cef1cd6e10cb313348feacb">More...</a><br/></td></tr>
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<tr class="memitem:abe90dc4ba735b87228bfe913b490f9f2"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="structOpenMS_1_1FeatureFinderAlgorithmPickedHelperStructs_1_1TheoreticalIsotopePattern.html#abe90dc4ba735b87228bfe913b490f9f2">trimmed_left</a></td></tr>
<tr class="memdesc:abe90dc4ba735b87228bfe913b490f9f2"><td class="mdescLeft"> </td><td class="mdescRight">The number of isotopes trimmed on the left side. This is needed to reconstruct the monoisotopic peak. <a href="#abe90dc4ba735b87228bfe913b490f9f2">More...</a><br/></td></tr>
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<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
<div class="textblock"><p>Helper structure for a theoretical isotope pattern used in <a class="el" href="classOpenMS_1_1FeatureFinderAlgorithmPicked.html" title="FeatureFinderAlgorithm for picked peaks. ">FeatureFinderAlgorithmPicked</a>. </p>
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<p>Returns the size. </p>
<p>Referenced by <a class="el" href="classOpenMS_1_1FeatureFinderAlgorithmPicked.html#ad47e8e2093326bd3a2476713d538dd9e">FeatureFinderAlgorithmPicked< PeakType, FeatureType >::findBestIsotopeFit_()</a>, <a class="el" href="classOpenMS_1_1FeatureFinderAlgorithmPicked.html#a55abad1b592c5e19bfaddfc9f9c4a43e">FeatureFinderAlgorithmPicked< PeakType, FeatureType >::isotopeScore_()</a>, and <a class="el" href="classOpenMS_1_1FeatureFinderAlgorithmPicked.html#a72fcb26a14f6beb1c3fbace9ab3e7dbb">FeatureFinderAlgorithmPicked< PeakType, FeatureType >::run()</a>.</p>
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<td class="memname">std::vector<<a class="el" href="group__Concept.html#gace75bfb1aba684e874dffee13738bd15">DoubleReal</a>> intensity</td>
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<p>Vector of intensity contributions. </p>
<p>Referenced by <a class="el" href="classOpenMS_1_1FeatureFinderAlgorithmPicked.html#a00f443c46b1d9f3485ef02d844b2433d">FeatureFinderAlgorithmPicked< PeakType, FeatureType >::extendMassTraces_()</a>, <a class="el" href="classOpenMS_1_1FeatureFinderAlgorithmPicked.html#a55abad1b592c5e19bfaddfc9f9c4a43e">FeatureFinderAlgorithmPicked< PeakType, FeatureType >::isotopeScore_()</a>, and <a class="el" href="classOpenMS_1_1FeatureFinderAlgorithmPicked.html#a72fcb26a14f6beb1c3fbace9ab3e7dbb">FeatureFinderAlgorithmPicked< PeakType, FeatureType >::run()</a>.</p>
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<p>The maximum intensity contribution before scaling the pattern to 1. </p>
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<td class="memname"><a class="el" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a> optional_begin</td>
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<p>Number of optional peaks at the beginning of the pattern. </p>
<p>Referenced by <a class="el" href="classOpenMS_1_1FeatureFinderAlgorithmPicked.html#a55abad1b592c5e19bfaddfc9f9c4a43e">FeatureFinderAlgorithmPicked< PeakType, FeatureType >::isotopeScore_()</a>.</p>
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<p>Number of optional peaks at the end of the pattern. </p>
<p>Referenced by <a class="el" href="classOpenMS_1_1FeatureFinderAlgorithmPicked.html#a55abad1b592c5e19bfaddfc9f9c4a43e">FeatureFinderAlgorithmPicked< PeakType, FeatureType >::isotopeScore_()</a>.</p>
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<td class="memname"><a class="el" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a> trimmed_left</td>
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<p>The number of isotopes trimmed on the left side. This is needed to reconstruct the monoisotopic peak. </p>
<p>Referenced by <a class="el" href="classOpenMS_1_1FeatureFinderAlgorithmPicked.html#a72fcb26a14f6beb1c3fbace9ab3e7dbb">FeatureFinderAlgorithmPicked< PeakType, FeatureType >::run()</a>.</p>
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