1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133
|
<HTML>
<HEAD>
<TITLE>SimpleExtender< PeakType, FeatureType >::IndexWithPriority Struct Reference</TITLE>
<LINK HREF="doxygen.css" REL="stylesheet" TYPE="text/css">
<LINK HREF="style_ini.css" REL="stylesheet" TYPE="text/css">
</HEAD>
<BODY BGCOLOR="#FFFFFF">
<A href="index.html">Home</A> ·
<A href="classes.html">Classes</A> ·
<A href="annotated.html">Annotated Classes</A> ·
<A href="modules.html">Modules</A> ·
<A href="functions_func.html">Members</A> ·
<A href="namespaces.html">Namespaces</A> ·
<A href="pages.html">Related Pages</A>
<HR style="height:1px; border:none; border-top:1px solid #c0c0c0;">
<!-- Generated by Doxygen 1.8.5 -->
<div id="nav-path" class="navpath">
<ul>
<li class="navelem"><a class="el" href="namespaceOpenMS.html">OpenMS</a></li><li class="navelem"><a class="el" href="classOpenMS_1_1SimpleExtender.html">SimpleExtender</a></li><li class="navelem"><a class="el" href="structOpenMS_1_1SimpleExtender_1_1IndexWithPriority.html">IndexWithPriority</a></li> </ul>
</div>
</div><!-- top -->
<div class="header">
<div class="summary">
<a href="#nested-classes">Classes</a> |
<a href="#pub-methods">Public Member Functions</a> |
<a href="#pub-attribs">Public Attributes</a> |
<a href="structOpenMS_1_1SimpleExtender_1_1IndexWithPriority-members.html">List of all members</a> </div>
<div class="headertitle">
<div class="title">SimpleExtender< PeakType, FeatureType >::IndexWithPriority Struct Reference</div> </div>
</div><!--header-->
<div class="contents">
<p>A helper structure to sort indizes by their priority.
<a href="structOpenMS_1_1SimpleExtender_1_1IndexWithPriority.html#details">More...</a></p>
<p><code>#include <<a class="el" href="SimpleExtender_8h_source.html">OpenMS/TRANSFORMATIONS/FEATUREFINDER/SimpleExtender.h</a>></code></p>
<table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="nested-classes"></a>
Classes</h2></td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct  </td><td class="memItemRight" valign="bottom"><a class="el" href="structOpenMS_1_1SimpleExtender_1_1IndexWithPriority_1_1PriorityLess.html">PriorityLess</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">Compares two indizes by priority. <a href="structOpenMS_1_1SimpleExtender_1_1IndexWithPriority_1_1PriorityLess.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2"> </td></tr>
</table><table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pub-methods"></a>
Public Member Functions</h2></td></tr>
<tr class="memitem:afd86213ee8bc3472479345914cffd9de"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="structOpenMS_1_1SimpleExtender_1_1IndexWithPriority.html#afd86213ee8bc3472479345914cffd9de">IndexWithPriority</a> (const <a class="el" href="structOpenMS_1_1FeatureFinderDefs.html#aaee0bfd850887fdc58115cead9e9b8b9">FeatureFinderDefs::IndexPair</a> &i, <a class="el" href="group__Concept.html#gace75bfb1aba684e874dffee13738bd15">DoubleReal</a> p)</td></tr>
<tr class="separator:afd86213ee8bc3472479345914cffd9de"><td class="memSeparator" colspan="2"> </td></tr>
</table><table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pub-attribs"></a>
Public Attributes</h2></td></tr>
<tr class="memitem:ab357bcae242be91471c4c45149871dc9"><td class="memItemLeft" align="right" valign="top"><a class="el" href="structOpenMS_1_1FeatureFinderDefs.html#aaee0bfd850887fdc58115cead9e9b8b9">IndexPair</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="structOpenMS_1_1SimpleExtender_1_1IndexWithPriority.html#ab357bcae242be91471c4c45149871dc9">index</a></td></tr>
<tr class="separator:ab357bcae242be91471c4c45149871dc9"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:ae138c9d8b5236dce0ba0250360815ee4"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1SimpleExtender.html#a148f3853784fb91146ee0a2c97fbe152">ProbabilityType</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="structOpenMS_1_1SimpleExtender_1_1IndexWithPriority.html#ae138c9d8b5236dce0ba0250360815ee4">priority</a></td></tr>
<tr class="separator:ae138c9d8b5236dce0ba0250360815ee4"><td class="memSeparator" colspan="2"> </td></tr>
</table>
<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
<div class="textblock"><h3>template<class PeakType, class FeatureType><br/>
struct OpenMS::SimpleExtender< PeakType, FeatureType >::IndexWithPriority</h3>
<p>A helper structure to sort indizes by their priority. </p>
<p>This structure is used to keep track of the boundary of a feature. After a peak is found during the extension phase, we compute its priority (which is dependant on its distance from the point that was the last to be extracted from the boundary and its intensity). If this priority is large enough, we include the point into the boundary. The boundary (which is implemented as mutable priority queue) sorts the peaks by this priority. </p>
</div><h2 class="groupheader">Constructor & Destructor Documentation</h2>
<a class="anchor" id="afd86213ee8bc3472479345914cffd9de"></a>
<div class="memitem">
<div class="memproto">
<table class="mlabels">
<tr>
<td class="mlabels-left">
<table class="memname">
<tr>
<td class="memname"><a class="el" href="structOpenMS_1_1SimpleExtender_1_1IndexWithPriority.html">IndexWithPriority</a> </td>
<td>(</td>
<td class="paramtype">const <a class="el" href="structOpenMS_1_1FeatureFinderDefs.html#aaee0bfd850887fdc58115cead9e9b8b9">FeatureFinderDefs::IndexPair</a> & </td>
<td class="paramname"><em>i</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype"><a class="el" href="group__Concept.html#gace75bfb1aba684e874dffee13738bd15">DoubleReal</a> </td>
<td class="paramname"><em>p</em> </td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</td>
<td class="mlabels-right">
<span class="mlabels"><span class="mlabel">inline</span></span> </td>
</tr>
</table>
</div><div class="memdoc">
</div>
</div>
<h2 class="groupheader">Member Data Documentation</h2>
<a class="anchor" id="ab357bcae242be91471c4c45149871dc9"></a>
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname"><a class="el" href="structOpenMS_1_1FeatureFinderDefs.html#aaee0bfd850887fdc58115cead9e9b8b9">IndexPair</a> index</td>
</tr>
</table>
</div><div class="memdoc">
</div>
</div>
<a class="anchor" id="ae138c9d8b5236dce0ba0250360815ee4"></a>
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname"><a class="el" href="classOpenMS_1_1SimpleExtender.html#a148f3853784fb91146ee0a2c97fbe152">ProbabilityType</a> priority</td>
</tr>
</table>
</div><div class="memdoc">
<p>Referenced by <a class="el" href="structOpenMS_1_1SimpleExtender_1_1IndexWithPriority_1_1PriorityLess.html#a1a8a07ce1c989507ef080f86788434bb">SimpleExtender< PeakType, FeatureType >::IndexWithPriority::PriorityLess::operator()()</a>.</p>
</div>
</div>
</div><!-- contents -->
<HR style="height:1px; border:none; border-top:1px solid #c0c0c0;">
<TABLE width="100%" border="0">
<TR>
<TD><font color="#c0c0c0">OpenMS / TOPP release 1.11.1</font></TD>
<TD align="right"><font color="#c0c0c0">Documentation generated on Thu Nov 14 2013 11:19:34 using doxygen 1.8.5</font></TD>
</TR>
</TABLE>
</BODY>
</HTML>
|