File: structOpenMS_1_1SimpleExtender_1_1IndexWithPriority.html

package info (click to toggle)
openms 1.11.1-5
  • links: PTS, VCS
  • area: main
  • in suites: jessie, jessie-kfreebsd
  • size: 436,688 kB
  • ctags: 150,907
  • sloc: cpp: 387,126; xml: 71,547; python: 7,764; ansic: 2,626; php: 2,499; sql: 737; ruby: 342; sh: 325; makefile: 128
file content (133 lines) | stat: -rw-r--r-- 7,984 bytes parent folder | download
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
<HTML>
<HEAD>
<TITLE>SimpleExtender&lt; PeakType, FeatureType &gt;::IndexWithPriority Struct Reference</TITLE>
<LINK HREF="doxygen.css" REL="stylesheet" TYPE="text/css">
<LINK HREF="style_ini.css" REL="stylesheet" TYPE="text/css">
</HEAD>
<BODY BGCOLOR="#FFFFFF">
<A href="index.html">Home</A> &nbsp;&middot;
<A href="classes.html">Classes</A> &nbsp;&middot;
<A href="annotated.html">Annotated Classes</A> &nbsp;&middot;
<A href="modules.html">Modules</A> &nbsp;&middot;
<A href="functions_func.html">Members</A> &nbsp;&middot;
<A href="namespaces.html">Namespaces</A> &nbsp;&middot;
<A href="pages.html">Related Pages</A>
<HR style="height:1px; border:none; border-top:1px solid #c0c0c0;">
<!-- Generated by Doxygen 1.8.5 -->
<div id="nav-path" class="navpath">
  <ul>
<li class="navelem"><a class="el" href="namespaceOpenMS.html">OpenMS</a></li><li class="navelem"><a class="el" href="classOpenMS_1_1SimpleExtender.html">SimpleExtender</a></li><li class="navelem"><a class="el" href="structOpenMS_1_1SimpleExtender_1_1IndexWithPriority.html">IndexWithPriority</a></li>  </ul>
</div>
</div><!-- top -->
<div class="header">
  <div class="summary">
<a href="#nested-classes">Classes</a> &#124;
<a href="#pub-methods">Public Member Functions</a> &#124;
<a href="#pub-attribs">Public Attributes</a> &#124;
<a href="structOpenMS_1_1SimpleExtender_1_1IndexWithPriority-members.html">List of all members</a>  </div>
  <div class="headertitle">
<div class="title">SimpleExtender&lt; PeakType, FeatureType &gt;::IndexWithPriority Struct Reference</div>  </div>
</div><!--header-->
<div class="contents">

<p>A helper structure to sort indizes by their priority.  
 <a href="structOpenMS_1_1SimpleExtender_1_1IndexWithPriority.html#details">More...</a></p>

<p><code>#include &lt;<a class="el" href="SimpleExtender_8h_source.html">OpenMS/TRANSFORMATIONS/FEATUREFINDER/SimpleExtender.h</a>&gt;</code></p>
<table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="nested-classes"></a>
Classes</h2></td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structOpenMS_1_1SimpleExtender_1_1IndexWithPriority_1_1PriorityLess.html">PriorityLess</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Compares two indizes by priority.  <a href="structOpenMS_1_1SimpleExtender_1_1IndexWithPriority_1_1PriorityLess.html#details">More...</a><br/></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
</table><table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pub-methods"></a>
Public Member Functions</h2></td></tr>
<tr class="memitem:afd86213ee8bc3472479345914cffd9de"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structOpenMS_1_1SimpleExtender_1_1IndexWithPriority.html#afd86213ee8bc3472479345914cffd9de">IndexWithPriority</a> (const <a class="el" href="structOpenMS_1_1FeatureFinderDefs.html#aaee0bfd850887fdc58115cead9e9b8b9">FeatureFinderDefs::IndexPair</a> &amp;i, <a class="el" href="group__Concept.html#gace75bfb1aba684e874dffee13738bd15">DoubleReal</a> p)</td></tr>
<tr class="separator:afd86213ee8bc3472479345914cffd9de"><td class="memSeparator" colspan="2">&#160;</td></tr>
</table><table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pub-attribs"></a>
Public Attributes</h2></td></tr>
<tr class="memitem:ab357bcae242be91471c4c45149871dc9"><td class="memItemLeft" align="right" valign="top"><a class="el" href="structOpenMS_1_1FeatureFinderDefs.html#aaee0bfd850887fdc58115cead9e9b8b9">IndexPair</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structOpenMS_1_1SimpleExtender_1_1IndexWithPriority.html#ab357bcae242be91471c4c45149871dc9">index</a></td></tr>
<tr class="separator:ab357bcae242be91471c4c45149871dc9"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:ae138c9d8b5236dce0ba0250360815ee4"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1SimpleExtender.html#a148f3853784fb91146ee0a2c97fbe152">ProbabilityType</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structOpenMS_1_1SimpleExtender_1_1IndexWithPriority.html#ae138c9d8b5236dce0ba0250360815ee4">priority</a></td></tr>
<tr class="separator:ae138c9d8b5236dce0ba0250360815ee4"><td class="memSeparator" colspan="2">&#160;</td></tr>
</table>
<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
<div class="textblock"><h3>template&lt;class PeakType, class FeatureType&gt;<br/>
struct OpenMS::SimpleExtender&lt; PeakType, FeatureType &gt;::IndexWithPriority</h3>

<p>A helper structure to sort indizes by their priority. </p>
<p>This structure is used to keep track of the boundary of a feature. After a peak is found during the extension phase, we compute its priority (which is dependant on its distance from the point that was the last to be extracted from the boundary and its intensity). If this priority is large enough, we include the point into the boundary. The boundary (which is implemented as mutable priority queue) sorts the peaks by this priority. </p>
</div><h2 class="groupheader">Constructor &amp; Destructor Documentation</h2>
<a class="anchor" id="afd86213ee8bc3472479345914cffd9de"></a>
<div class="memitem">
<div class="memproto">
<table class="mlabels">
  <tr>
  <td class="mlabels-left">
      <table class="memname">
        <tr>
          <td class="memname"><a class="el" href="structOpenMS_1_1SimpleExtender_1_1IndexWithPriority.html">IndexWithPriority</a> </td>
          <td>(</td>
          <td class="paramtype">const <a class="el" href="structOpenMS_1_1FeatureFinderDefs.html#aaee0bfd850887fdc58115cead9e9b8b9">FeatureFinderDefs::IndexPair</a> &amp;&#160;</td>
          <td class="paramname"><em>i</em>, </td>
        </tr>
        <tr>
          <td class="paramkey"></td>
          <td></td>
          <td class="paramtype"><a class="el" href="group__Concept.html#gace75bfb1aba684e874dffee13738bd15">DoubleReal</a>&#160;</td>
          <td class="paramname"><em>p</em>&#160;</td>
        </tr>
        <tr>
          <td></td>
          <td>)</td>
          <td></td><td></td>
        </tr>
      </table>
  </td>
  <td class="mlabels-right">
<span class="mlabels"><span class="mlabel">inline</span></span>  </td>
  </tr>
</table>
</div><div class="memdoc">

</div>
</div>
<h2 class="groupheader">Member Data Documentation</h2>
<a class="anchor" id="ab357bcae242be91471c4c45149871dc9"></a>
<div class="memitem">
<div class="memproto">
      <table class="memname">
        <tr>
          <td class="memname"><a class="el" href="structOpenMS_1_1FeatureFinderDefs.html#aaee0bfd850887fdc58115cead9e9b8b9">IndexPair</a> index</td>
        </tr>
      </table>
</div><div class="memdoc">

</div>
</div>
<a class="anchor" id="ae138c9d8b5236dce0ba0250360815ee4"></a>
<div class="memitem">
<div class="memproto">
      <table class="memname">
        <tr>
          <td class="memname"><a class="el" href="classOpenMS_1_1SimpleExtender.html#a148f3853784fb91146ee0a2c97fbe152">ProbabilityType</a> priority</td>
        </tr>
      </table>
</div><div class="memdoc">

<p>Referenced by <a class="el" href="structOpenMS_1_1SimpleExtender_1_1IndexWithPriority_1_1PriorityLess.html#a1a8a07ce1c989507ef080f86788434bb">SimpleExtender&lt; PeakType, FeatureType &gt;::IndexWithPriority::PriorityLess::operator()()</a>.</p>

</div>
</div>
</div><!-- contents -->
<HR style="height:1px; border:none; border-top:1px solid #c0c0c0;">
<TABLE width="100%" border="0">
<TR>
<TD><font color="#c0c0c0">OpenMS / TOPP release 1.11.1</font></TD>
<TD align="right"><font color="#c0c0c0">Documentation generated on Thu Nov 14 2013 11:19:34 using doxygen 1.8.5</font></TD>
</TR>
</TABLE>
</BODY>
</HTML>