File: README

package info (click to toggle)
openms 1.11.1-5
  • links: PTS, VCS
  • area: main
  • in suites: jessie, jessie-kfreebsd
  • size: 436,688 kB
  • ctags: 150,907
  • sloc: cpp: 387,126; xml: 71,547; python: 7,764; ansic: 2,626; php: 2,499; sql: 737; ruby: 342; sh: 325; makefile: 128
file content (29 lines) | stat: -rw-r--r-- 948 bytes parent folder | download
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
This is the text file based OpenMS DocumentID pool.

*** General Information ***

By default the file IDPool.txt in this directory is used as ID pool by the TOPP tools capable of
assigning DocumentID's.
The file format is very simple: one line equals one unique ID.
e.g.
>>> IDPool.txt:
ABC123
ABC124
ABC125
<<< END IDPool.txt

However the default ID pool file is *empty*.

OpenMS will issue a warning once the ID pool file reaches a critical low level of five(5) remaining IDs.


*** Using other ID Pool files ***

If you wish to use another file as IDPool set the
environment variable OPENMS_IDPOOL_FILE to the appropriate file path before calling the TOPP tool.


*** Anticipated problems ***

On Linux, some older kernels do not support file locking on remote network drives. If you happen to have OpenMS installed
on a network drive and experience problems, try using a local file as ID pool (just set OPENMS_IDPOOL_FILE environment variable).