File: CMakeLists.txt

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### example CMakeLists.txt to develop programs using OpenMS
project("Main")
cmake_minimum_required(VERSION 2.6)

## list all your executables here (a corresponding .C file should exist, e.g. Main.C)
set(my_executables
	Main
)

## list all classes here, which are required by your executables
## (all these classes will be linked into a library)
set(my_sources
	ExampleLibraryFile.C
)

## find OpenMS configuration and register target "OpenMS" (our library)
find_package(OpenMS)
## if the above fails you can try:
#find_package(OpenMS PATHS "</c/path/to/OpenMS>/cmake")

# check whether the OpenMS package was found
if (OpenMS_FOUND)

  ## include directories for OpenMS headers (and contrib)
  include_directories(${OPENMS_INCLUDE_DIRS})

  
  ## append precompiler macros and compiler flags specific to OpenMS
  ## Warning: this could be harmful to your project. Check this if problems occur.
  ## Also, use this to add your own compiler flags, e.g. for OpenMP support.
  ## e.g. for Visual Studio use /openmp
  ## set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ${OPENMS_ADDCXX_FLAGS} /openmp")
  set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ${OPENMS_ADDCXX_FLAGS}")
  add_definitions(${OPENMS_DEFINITIONS})
  
  ## library with additional classes from above
  add_library(my_custom_lib STATIC ${my_sources})
  
  ## add targets for the executables
  foreach(i ${my_executables})
    add_executable(${i} ${i}.C)
    ## link executables against OpenMS
	target_link_libraries(${i} OpenMS my_custom_lib)
  endforeach(i)

  
else(OpenMS_FOUND)
  message(FATAL_ERROR "OpenMSConfig.cmake file not found!")
endif(OpenMS_FOUND)