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// --------------------------------------------------------------------------
// OpenMS -- Open-Source Mass Spectrometry
// --------------------------------------------------------------------------
// Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
// ETH Zurich, and Freie Universitaet Berlin 2002-2013.
//
// This software is released under a three-clause BSD license:
// * Redistributions of source code must retain the above copyright
// notice, this list of conditions and the following disclaimer.
// * Redistributions in binary form must reproduce the above copyright
// notice, this list of conditions and the following disclaimer in the
// documentation and/or other materials provided with the distribution.
// * Neither the name of any author or any participating institution
// may be used to endorse or promote products derived from this software
// without specific prior written permission.
// For a full list of authors, refer to the file AUTHORS.
// --------------------------------------------------------------------------
// THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
// AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
// ARE DISCLAIMED. IN NO EVENT SHALL ANY OF THE AUTHORS OR THE CONTRIBUTING
// INSTITUTIONS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
// OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
// WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
// OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
// ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
//
// --------------------------------------------------------------------------
// $Maintainer: Andreas Bertsch $
// $Authors: $
// --------------------------------------------------------------------------
//
#include <OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h>
#include <OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h>
#include <OpenMS/COMPARISON/SPECTRA/SpectrumPrecursorComparator.h>
#include <OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h>
#include <OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h>
#include <OpenMS/COMPARISON/SPECTRA/SteinScottImproveScore.h>
#include <OpenMS/COMPARISON/SPECTRA/CompareFouriertransform.h>
#include <OpenMS/COMPARISON/SPECTRA/PeakAlignment.h>
#include <OpenMS/CONCEPT/Factory.h>
#include <cmath>
#include <sstream>
using namespace std;
namespace OpenMS
{
PeakSpectrumCompareFunctor::PeakSpectrumCompareFunctor() :
DefaultParamHandler(PeakSpectrumCompareFunctor::getProductName())
{
}
PeakSpectrumCompareFunctor::PeakSpectrumCompareFunctor(const PeakSpectrumCompareFunctor & source) :
DefaultParamHandler(source)
{
}
PeakSpectrumCompareFunctor::~PeakSpectrumCompareFunctor()
{
}
PeakSpectrumCompareFunctor & PeakSpectrumCompareFunctor::operator=(const PeakSpectrumCompareFunctor & source)
{
if (this != &source)
{
DefaultParamHandler::operator=(source);
}
return *this;
}
void PeakSpectrumCompareFunctor::registerChildren()
{
Factory<PeakSpectrumCompareFunctor>::registerProduct(SpectrumCheapDPCorr::getProductName(), &SpectrumCheapDPCorr::create);
Factory<PeakSpectrumCompareFunctor>::registerProduct(SpectrumPrecursorComparator::getProductName(), &SpectrumPrecursorComparator::create);
Factory<PeakSpectrumCompareFunctor>::registerProduct(ZhangSimilarityScore::getProductName(), &ZhangSimilarityScore::create);
Factory<PeakSpectrumCompareFunctor>::registerProduct(SpectrumAlignmentScore::getProductName(), &SpectrumAlignmentScore::create);
Factory<PeakSpectrumCompareFunctor>::registerProduct(SteinScottImproveScore::getProductName(), &SteinScottImproveScore::create);
Factory<PeakSpectrumCompareFunctor>::registerProduct(CompareFouriertransform::getProductName(), &CompareFouriertransform::create);
Factory<PeakSpectrumCompareFunctor>::registerProduct(PeakAlignment::getProductName(), &PeakAlignment::create);
}
}
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