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// --------------------------------------------------------------------------
// OpenMS -- Open-Source Mass Spectrometry
// --------------------------------------------------------------------------
// Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
// ETH Zurich, and Freie Universitaet Berlin 2002-2013.
//
// This software is released under a three-clause BSD license:
// * Redistributions of source code must retain the above copyright
// notice, this list of conditions and the following disclaimer.
// * Redistributions in binary form must reproduce the above copyright
// notice, this list of conditions and the following disclaimer in the
// documentation and/or other materials provided with the distribution.
// * Neither the name of any author or any participating institution
// may be used to endorse or promote products derived from this software
// without specific prior written permission.
// For a full list of authors, refer to the file AUTHORS.
// --------------------------------------------------------------------------
// THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
// AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
// ARE DISCLAIMED. IN NO EVENT SHALL ANY OF THE AUTHORS OR THE CONTRIBUTING
// INSTITUTIONS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
// OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
// WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
// OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
// ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
//
// --------------------------------------------------------------------------
// $Maintainer: Mathias Walzer$
// $Authors: $
// --------------------------------------------------------------------------
#include <OpenMS/CONCEPT/ClassTest.h>
///////////////////////////
#include <OpenMS/COMPARISON/SPECTRA/BinnedSharedPeakCount.h>
#include <OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h>
#include <OpenMS/FORMAT/DTAFile.h>
///////////////////////////
using namespace OpenMS;
using namespace std;
START_TEST(BinnedSharedPeakCount, "$Id: BinnedSharedPeakCount_test.C 10915 2013-04-04 20:14:57Z aiche $")
/////////////////////////////////////////////////////////////
/////////////////////////////////////////////////////////////
BinnedSharedPeakCount* ptr = 0;
BinnedSharedPeakCount* nullPointer = 0;
START_SECTION(BinnedSharedPeakCount())
{
ptr = new BinnedSharedPeakCount();
TEST_NOT_EQUAL(ptr, nullPointer)
}
END_SECTION
START_SECTION(~BinnedSharedPeakCount())
{
delete ptr;
}
END_SECTION
ptr = new BinnedSharedPeakCount();
START_SECTION((BinnedSharedPeakCount(const BinnedSharedPeakCount &source)))
{
BinnedSharedPeakCount copy(*ptr);
TEST_EQUAL(copy.getName(), ptr->getName());
TEST_EQUAL(copy.getParameters(), ptr->getParameters());
}
END_SECTION
START_SECTION((BinnedSharedPeakCount& operator=(const BinnedSharedPeakCount &source)))
{
BinnedSharedPeakCount copy;
copy = *ptr;
TEST_EQUAL(copy.getName(), ptr->getName());
TEST_EQUAL(copy.getParameters(), ptr->getParameters());
}
END_SECTION
START_SECTION((double operator()(const BinnedSpectrum &spec1, const BinnedSpectrum &spec2) const))
{
PeakSpectrum s1, s2;
DTAFile().load(OPENMS_GET_TEST_DATA_PATH("PILISSequenceDB_DFPIANGER_1.dta"), s1);
DTAFile().load(OPENMS_GET_TEST_DATA_PATH("PILISSequenceDB_DFPIANGER_1.dta"), s2);
s2.pop_back();
BinnedSpectrum bs1 (1.5,2,s1);
BinnedSpectrum bs2 (1.5,2,s2);
double score = (*ptr)(bs1, bs2);
TEST_REAL_SIMILAR(score,0.997118)
}
END_SECTION
START_SECTION((double operator()(const BinnedSpectrum &spec) const ))
{
PeakSpectrum s1;
DTAFile().load(OPENMS_GET_TEST_DATA_PATH("PILISSequenceDB_DFPIANGER_1.dta"), s1);
BinnedSpectrum bs1 (1.5,2,s1);
double score = (*ptr)(bs1);
TEST_REAL_SIMILAR(score,1);
}
END_SECTION
START_SECTION((static BinnedSpectrumCompareFunctor* create()))
{
BinnedSpectrumCompareFunctor* bsf = BinnedSharedPeakCount::create();
BinnedSharedPeakCount bsp;
TEST_EQUAL(bsf->getParameters(), bsp.getParameters())
TEST_EQUAL(bsf->getName(), bsp.getName())
}
END_SECTION
START_SECTION((static const String getProductName()))
{
TEST_EQUAL(ptr->getProductName(), "BinnedSharedPeakCount")
}
END_SECTION
/////////////////////////////////////////////////////////////
/////////////////////////////////////////////////////////////
END_TEST
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