File: PILISModelGenerator_test.C

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// --------------------------------------------------------------------------
//                   OpenMS -- Open-Source Mass Spectrometry               
// --------------------------------------------------------------------------
// Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
// ETH Zurich, and Freie Universitaet Berlin 2002-2013.
// 
// This software is released under a three-clause BSD license:
//  * Redistributions of source code must retain the above copyright
//    notice, this list of conditions and the following disclaimer.
//  * Redistributions in binary form must reproduce the above copyright
//    notice, this list of conditions and the following disclaimer in the
//    documentation and/or other materials provided with the distribution.
//  * Neither the name of any author or any participating institution 
//    may be used to endorse or promote products derived from this software 
//    without specific prior written permission.
// For a full list of authors, refer to the file AUTHORS. 
// --------------------------------------------------------------------------
// THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
// AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
// ARE DISCLAIMED. IN NO EVENT SHALL ANY OF THE AUTHORS OR THE CONTRIBUTING 
// INSTITUTIONS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, 
// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, 
// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; 
// OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, 
// WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR 
// OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF 
// ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
// 
// --------------------------------------------------------------------------
// $Maintainer: Andreas Bertsch $
// $Authors: Andreas Bertsch $
// --------------------------------------------------------------------------

#include <OpenMS/CONCEPT/ClassTest.h>

///////////////////////////

#include <OpenMS/ANALYSIS/ID/PILISModelGenerator.h>
#include <OpenMS/ANALYSIS/ID/HiddenMarkovModel.h>

///////////////////////////

START_TEST(PILISModelGenerator_test.C, "$Id: PILISModelGenerator_test.C 10915 2013-04-04 20:14:57Z aiche $")

/////////////////////////////////////////////////////////////
/////////////////////////////////////////////////////////////

using namespace OpenMS;
using namespace std;

PILISModelGenerator* ptr = 0;
PILISModelGenerator* nullPointer = 0;
START_SECTION(PILISModelGenerator())
	ptr = new PILISModelGenerator();
	TEST_NOT_EQUAL(ptr, nullPointer)
END_SECTION

START_SECTION(~PILISModelGenerator())
	delete ptr;
END_SECTION

ptr = new PILISModelGenerator();

START_SECTION(PILISModelGenerator(const PILISModelGenerator& model))
	PILISModelGenerator p1;
	Param p(p1.getParameters());
	p.setValue("visible_model_depth", 10);
	p1.setParameters(p);

	PILISModelGenerator p2(p1);
	TEST_EQUAL(p1.getParameters() == p2.getParameters(), true)
END_SECTION

START_SECTION(PILISModelGenerator& operator = (const PILISModelGenerator& mode))
  PILISModelGenerator p1;
  Param p(p1.getParameters());
  p.setValue("visible_model_depth", 10);
  p1.setParameters(p);

  PILISModelGenerator p2;
	p2 = p1;
  TEST_EQUAL(p1.getParameters() == p2.getParameters(), true)
END_SECTION

START_SECTION((void getModel(HiddenMarkovModel& model)))
	HiddenMarkovModel hmm;
	TEST_EQUAL(hmm.getNumberOfStates(), 0)
	PILISModelGenerator p;
	p.getModel(hmm);
	TEST_EQUAL(hmm.getNumberOfStates(), 68379)
END_SECTION

/////////////////////////////////////////////////////////////
/////////////////////////////////////////////////////////////

END_TEST