1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
|
# --------------------------------------------------------------------------
# OpenMS -- Open-Source Mass Spectrometry
# --------------------------------------------------------------------------
# Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
# ETH Zurich, and Freie Universitaet Berlin 2002-2012.
#
# This software is released under a three-clause BSD license:
# * Redistributions of source code must retain the above copyright
# notice, this list of conditions and the following disclaimer.
# * Redistributions in binary form must reproduce the above copyright
# notice, this list of conditions and the following disclaimer in the
# documentation and/or other materials provided with the distribution.
# * Neither the name of any author or any participating institution
# may be used to endorse or promote products derived from this software
# without specific prior written permission.
# For a full list of authors, refer to the file AUTHORS.
# --------------------------------------------------------------------------
# THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
# AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
# IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
# ARE DISCLAIMED. IN NO EVENT SHALL ANY OF THE AUTHORS OR THE CONTRIBUTING
# INSTITUTIONS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
# EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
# PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
# OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
# WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
#
# --------------------------------------------------------------------------
# $Maintainer: $
# $Authors: Marc Sturm $
# --------------------------------------------------------------------------
#Make sure a SVN path is given as first argument
#Make sure the path to the documentation is given as second argument
if test ! $1 || test ! $2 || test ! $3; then
echo "Use: make_dist.sh <branch> <documentation> <version>";
echo "";
echo "Pass the SVN path inside the OpenMS repository as first argument.";
echo "For the 1.2 release branch that would be 'branches/Release1.2'.";
echo "";
echo "Pass the path to an OpenMS/doc directory containing the current";
echo "documentation as the second argument.";
echo "";
echo "Pass the release version as third argument.";
echo "";
exit;
fi
# create a dummy directory and extract the branch of OpenMS
echo "####################################################"
echo "extracting OpenMS"
cd /tmp
rm -rf OpenMS-dist
mkdir OpenMS-dist
cd /tmp/OpenMS-dist
svn export https://open-ms.svn.sourceforge.net/svnroot/open-ms/$1 || ( echo "could not extract OpenMS" >&0 && exit )
mv `basename $1` OpenMS
echo ""
# copy documentation
echo "####################################################"
echo "copying documentation to release"
mv $2/OpenMS_tutorial.pdf OpenMS/doc/
mv $2/TOPP_tutorial.pdf OpenMS/doc/
mv $2/html OpenMS/doc/
# extract the current SVN version of contrib
echo "####################################################"
echo "extracting contrib"
cd OpenMS
svn export https://open-ms.svn.sourceforge.net/svnroot/open-ms/contrib || ( echo "cannot extract contrib" >&0 && exit )
# create archive
echo "####################################################"
echo "creating archive"
DIR="OpenMS-$3"
FILE="${DIR}.tar.gz"
cd /tmp/OpenMS-dist/
mv OpenMS ${DIR}
echo "creating archive /tmp/OpenMS-dist/${FILE}"
tar zcf ${FILE} ${DIR}
|
