File: Tutorial_FeatureMap.cpp

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// --------------------------------------------------------------------------
//                   OpenMS -- Open-Source Mass Spectrometry
// --------------------------------------------------------------------------
// Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
// ETH Zurich, and Freie Universitaet Berlin 2002-2018.
//
// This software is released under a three-clause BSD license:
//  * Redistributions of source code must retain the above copyright
//    notice, this list of conditions and the following disclaimer.
//  * Redistributions in binary form must reproduce the above copyright
//    notice, this list of conditions and the following disclaimer in the
//    documentation and/or other materials provided with the distribution.
//  * Neither the name of any author or any participating institution
//    may be used to endorse or promote products derived from this software
//    without specific prior written permission.
// For a full list of authors, refer to the file AUTHORS.
// --------------------------------------------------------------------------
// THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
// AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
// ARE DISCLAIMED. IN NO EVENT SHALL ANY OF THE AUTHORS OR THE CONTRIBUTING
// INSTITUTIONS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
// OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
// WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
// OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
// ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
//

//! [FeatureMap]

#include <OpenMS/KERNEL/FeatureMap.h>
#include <iostream>

using namespace OpenMS;
using namespace std;

int main()
{
  // Insert of two features into a map and iterate over the features.
  FeatureMap map;

  Feature feature;
  feature.setRT(15.0);
  feature.setMZ(571.3);
  map.push_back(feature); //append feature 1
  feature.setRT(23.3);
  feature.setMZ(1311.3);
  map.push_back(feature); //append feature 2

  // Iteration over FeatureMap
  for (auto it = map.begin(); it != map.end(); ++it)
  {
    cout << it->getRT() << " - " << it->getMZ() << endl;
  }

  // Calculate and output the ranges
  map.updateRanges();
  cout << "Int: " << map.getMinInt() << " - " << map.getMaxInt() << endl;
  cout << "RT:  " << map.getMin()[0] << " - " << map.getMax()[0] << endl;
  cout << "m/z: " << map.getMin()[1] << " - " << map.getMax()[1] << endl;

  // ... and many more
  return 0;
} //end of main

//! [FeatureMap]