1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336
|
***********************************************************
***********************************************************
This calculation was performed by OpenMX Ver. 3.7.33
using 1 MPI processes and 1 OpenMP threads.
Sun Mar 27 18:27:48 2016
***********************************************************
***********************************************************
#
# File Name
#
System.CurrrentDirectory ./ # default=./
System.Name HMn
level.of.stdout 1 # default=1 (1-3)
level.of.fileout 1 # default=1 (0-2)
#
# Definition of Atomic Species
#
Species.Number 2
<Definition.of.Atomic.Species
Mn Mn8.0-s2p1d1f1 Mn_PBE13
H H5.0-s1 H_PBE13
Definition.of.Atomic.Species>
#
# Atoms
#
Atoms.Number 2
Atoms.SpeciesAndCoordinates.Unit Ang # Ang|AU
<Atoms.SpeciesAndCoordinates
1 Mn 0.000 0.000 0.000 8.0 7.0
2 H 1.500 0.100 -0.200 0.5 0.5
Atoms.SpeciesAndCoordinates>
Atoms.UnitVectors.Unit Ang # Ang|AU
#<Atoms.UnitVectors
# 10.0 0.0 0.0
# 0.0 10.0 0.0
# 0.0 0.0 10.0
#Atoms.UnitVectors>
#
# SCF or Electronic System
#
scf.XcType GGA-PBE # LDA|LSDA-CA|LSDA-PW|GGA-PBE
scf.SpinPolarization on # On|Off|NC
scf.SpinOrbit.Coupling off # On|Off, default=off
scf.ElectronicTemperature 1000.0 # default=300 (K)
scf.energycutoff 230.0 # default=150 (Ry)
scf.maxIter 150 # default=40
scf.EigenvalueSolver cluster # Recursion|Cluster|Band
scf.Kgrid 1 1 1 # means n1 x n2 x n3
scf.Mixing.Type rmm-diisk # Simple|Rmm-Diis|Gr-Pulay|Kerker|Rmm-Diisk
scf.Init.Mixing.Weight 0.030 # default=0.30
scf.Min.Mixing.Weight 0.030 # default=0.001
scf.Max.Mixing.Weight 0.600 # default=0.40
scf.Mixing.History 30 # default=5
scf.Mixing.StartPulay 8 # default=6
scf.criterion 1.0e-10 # default=1.0e-6 (Hartree)
#
# MD or Geometry Optimization
#
MD.Type nomd # Nomd|Constant_Energy_MD|Opt
MD.maxIter 1 # default=1
MD.TimeStep 1.0 # default=0.5 (fs)
MD.Opt.criterion 1.0e-4 # default=1.0e-4 (Hartree/bohr)
***********************************************************
***********************************************************
Required cutoff energy (Ryd) for 3D-grids = 230.0000
Used cutoff energy (Ryd) for 3D-grids = 230.0010, 230.0010, 230.0010
Num. of grids of a-, b-, and c-axes = 90, 90, 90
Num.Grid1. 90
Num.Grid2. 90
Num.Grid3. 90
Cell_Volume = 6480.112714637663 (Bohr^3)
GridVol = 0.008889043504 (Bohr^3)
Cell vectors (bohr) of the grid cell (gtv)
gtv_a = 0.207150034788, 0.000000000000, 0.000000000000
gtv_b = 0.000000000000, 0.207150034788, 0.000000000000
gtv_c = 0.000000000000, 0.000000000000, 0.207150034788
|gtv_a| = 0.207150034788
|gtv_b| = 0.207150034788
|gtv_c| = 0.207150034788
***********************************************************
***********************************************************
***********************************************************
***********************************************************
SCF history at MD= 1
***********************************************************
***********************************************************
SCF= 1 NormRD= 1.000000000000 Uele= -20.569563373567
SCF= 2 NormRD= 5.996124409978 Uele= -20.322132688163
SCF= 3 NormRD= 6.080677713901 Uele= -20.137247887765
SCF= 4 NormRD= 5.973779742553 Uele= -19.969818754166
SCF= 5 NormRD= 4.549231037582 Uele= -16.982007024826
SCF= 6 NormRD= 2.886710223221 Uele= -20.091650289769
SCF= 7 NormRD= 1.956507193411 Uele= -17.710689234040
SCF= 8 NormRD= 1.153312756190 Uele= -19.631034218740
SCF= 9 NormRD= 0.387505553144 Uele= -18.837101839307
SCF= 10 NormRD= 0.115534489289 Uele= -18.795005024061
SCF= 11 NormRD= 0.032683295976 Uele= -18.859609829184
SCF= 12 NormRD= 0.008765502281 Uele= -18.865807794182
SCF= 13 NormRD= 0.002154831274 Uele= -18.862952492908
SCF= 14 NormRD= 0.000730394073 Uele= -18.863237780082
SCF= 15 NormRD= 0.000300290780 Uele= -18.863273605474
SCF= 16 NormRD= 0.000146128614 Uele= -18.863316632369
SCF= 17 NormRD= 0.000052578150 Uele= -18.863285401024
SCF= 18 NormRD= 0.000006063147 Uele= -18.863274716784
SCF= 19 NormRD= 0.000001481589 Uele= -18.863272833551
SCF= 20 NormRD= 0.000000502782 Uele= -18.863273000778
SCF= 21 NormRD= 0.000000127029 Uele= -18.863273087877
SCF= 22 NormRD= 0.000000025232 Uele= -18.863273117573
SCF= 23 NormRD= 0.000000003841 Uele= -18.863273124396
SCF= 24 NormRD= 0.000000000019 Uele= -18.863273125360
SCF= 25 NormRD= 0.000000000186 Uele= -18.863273125316
*******************************************************
Total energy (Hartree) at MD = 1
*******************************************************
Uele. -18.863273125316
Ukin. 56.962796847850
UH0. -92.616830894566
UH1. 0.035947335156
Una. -55.934932230323
Unl. -5.920011155045
Uxc0. -8.191279150747
Uxc1. -4.952484374236
Ucore. 5.233937174339
Uhub. 0.000000000000
Ucs. 0.000000000000
Uzs. 0.000000000000
Uzo. 0.000000000000
Uef. 0.000000000000
UvdW 0.000000000000
Utot. -105.382856447571
Note:
Utot = Ukin+UH0+UH1+Una+Unl+Uxc0+Uxc1+Ucore+Uhub+Ucs+Uzs+Uzo+Uef+UvdW
Uene: band energy
Ukin: kinetic energy
UH0: electric part of screened Coulomb energy
UH1: difference electron-electron Coulomb energy
Una: neutral atom potential energy
Unl: non-local potential energy
Uxc0: exchange-correlation energy for alpha spin
Uxc1: exchange-correlation energy for beta spin
Ucore: core-core Coulomb energy
Uhub: LDA+U energy
Ucs: constraint energy for spin orientation
Uzs: Zeeman term for spin magnetic moment
Uzo: Zeeman term for orbital magnetic moment
Uef: electric energy by electric field
UvdW: semi-empirical vdW energy
(see also PRB 72, 045121(2005) for the energy contributions)
Chemical potential (Hartree) -0.085880856490
***********************************************************
***********************************************************
Eigenvalues (Hartree) for SCF KS-eq.
***********************************************************
***********************************************************
Chemical Potential (Hartree) = -0.08588085649047
Number of States = 16.00000000000000
HOMO for up-spin = 10
HOMO for down-spin = 6
Eigenvalues
Up-spin Down-spin
1 -3.09001540762280 -2.92308663705386
2 -1.95477655606339 -1.78642720519509
3 -1.95464699642584 -1.78140997534254
4 -1.93012539948894 -1.78114827013801
5 -0.28134179672954 -0.26806794174811
6 -0.20791158469805 -0.11146901271757
7 -0.20750097980661 -0.05866077704787
8 -0.20583345276858 -0.05687751350485
9 -0.20561064984042 -0.04941993189300
10 -0.17391797283478 -0.04920060583151
11 -0.02394646839987 0.01697318040983
12 0.31420246645855 0.31474468552088
13 0.31423586389351 0.31474778353714
14 0.31726825571781 0.32015962606619
15 0.32518489346465 0.32838706972205
16 0.32524258621300 0.32846160789479
17 0.32886556321765 0.33045269125701
18 0.32886562185227 0.33045291945097
***********************************************************
***********************************************************
Mulliken populations
***********************************************************
***********************************************************
Total spin moment (muB) 4.000000006
Up spin Down spin Sum Diff
1 Mn 9.491008616 5.302498738 14.793507354 4.188509879
2 H 0.508991387 0.697501259 1.206492646 -0.188509872
Sum of MulP: up = 10.00000 down = 6.00000
total= 16.00000 ideal(neutral)= 16.00000
Decomposed Mulliken populations
1 Mn Up spin Down spin Sum Diff
multiple
s 0 0.999690423 1.000361254 2.000051677 -0.000670831
sum over m 0.999690423 1.000361254 2.000051677 -0.000670831
s 1 0.684583110 0.783156042 1.467739151 -0.098572932
sum over m 0.684583110 0.783156042 1.467739151 -0.098572932
sum over m+mul 1.684273533 1.783517296 3.467790829 -0.099243763
px 0 0.999125261 0.998828778 1.997954039 0.000296484
py 0 0.999996012 0.999993380 1.999989392 0.000002632
pz 0 0.999983717 0.999977822 1.999961539 0.000005895
sum over m 2.999104990 2.998799979 5.997904970 0.000305011
sum over m+mul 2.999104990 2.998799979 5.997904970 0.000305011
d3z^2-r^2 0 0.958051079 0.118577428 1.076628507 0.839473651
dx^2-y^2 0 0.864746895 0.371609589 1.236356484 0.493137306
dxy 0 0.997565114 0.006978804 1.004543918 0.990586311
dxz 0 0.990205445 0.028221769 1.018427214 0.961983677
dyz 0 0.999948855 0.000304959 1.000253814 0.999643895
sum over m 4.810517388 0.525692549 5.336209936 4.284824839
sum over m+mul 4.810517388 0.525692549 5.336209936 4.284824839
f5z^2-3r^2 0 -0.000106097 -0.000203936 -0.000310033 0.000097839
f5xz^2-xr^2 0 -0.000885104 -0.001684249 -0.002569353 0.000799145
f5yz^2-yr^2 0 -0.000003306 -0.000007497 -0.000010803 0.000004191
fzx^2-zy^2 0 -0.000178065 -0.000341736 -0.000519801 0.000163672
fxyz 0 0.000004245 -0.000006129 -0.000001884 0.000010373
fx^3-3*xy^2 0 -0.001655912 -0.003138586 -0.004794498 0.001482675
f3yx^2-y^3 0 -0.000063056 -0.000128953 -0.000192008 0.000065897
sum over m -0.002887294 -0.005511086 -0.008398380 0.002623792
sum over m+mul -0.002887294 -0.005511086 -0.008398380 0.002623792
2 H Up spin Down spin Sum Diff
multiple
s 0 0.508991387 0.697501259 1.206492646 -0.188509872
sum over m 0.508991387 0.697501259 1.206492646 -0.188509872
sum over m+mul 0.508991387 0.697501259 1.206492646 -0.188509872
***********************************************************
***********************************************************
Dipole moment (Debye)
***********************************************************
***********************************************************
Absolute D 2.30243206
Dx Dy Dz
Total -2.27693208 -0.15251331 0.30579959
Core 7.20481020 0.48032068 -0.96064136
Electron -9.48174228 -0.63283399 1.26644095
Back ground -0.00000000 -0.00000000 0.00000000
***********************************************************
***********************************************************
xyz-coordinates (Ang) and forces (Hartree/Bohr)
***********************************************************
***********************************************************
<coordinates.forces
2
1 Mn 0.00000 0.00000 0.00000 -0.024406948311 0.000276834819 0.006432832071
2 H 1.50000 0.10000 -0.20000 0.018850337254 0.001372280445 -0.002835879098
coordinates.forces>
***********************************************************
***********************************************************
Fractional coordinates of the final structure
***********************************************************
***********************************************************
1 Mn 0.00000000000000 0.00000000000000 0.00000000000000
2 H 0.15204165027128 0.01013611001809 0.97972777996383
***********************************************************
***********************************************************
Computational Time (second)
***********************************************************
***********************************************************
Elapsed.Time. 48.386
Min_ID Min_Time Max_ID Max_Time
Total Computational Time = 0 48.386 0 48.386
readfile = 0 7.436 0 7.436
truncation = 0 0.000 0 0.000
MD_pac = 0 0.000 0 0.000
OutData = 0 3.834 0 3.834
DFT = 0 36.594 0 36.594
*** In DFT ***
Set_OLP_Kin = 0 0.088 0 0.088
Set_Nonlocal = 0 0.065 0 0.065
Set_ProExpn_VNA = 0 0.181 0 0.181
Set_Hamiltonian = 0 12.245 0 12.245
Poisson = 0 1.159 0 1.159
Diagonalization = 0 0.022 0 0.022
Mixing_DM = 0 16.397 0 16.397
Force = 0 0.843 0 0.843
Total_Energy = 0 0.347 0 0.347
Set_Aden_Grid = 0 0.072 0 0.072
Set_Orbitals_Grid = 0 0.095 0 0.095
Set_Density_Grid = 0 2.126 0 2.126
RestartFileDFT = 0 0.014 0 0.014
Mulliken_Charge = 0 0.001 0 0.001
FFT(2D)_Density = 0 2.475 0 2.475
Others = 0 0.464 0 0.464
|