File: dng.in

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#!/bin/bash
#------------------------------------------------------------------------------
# This file is part of the OpenStructure project <www.openstructure.org>
#
# Copyright (C) 2008-2020 by the OpenStructure authors
#
# This library is free software; you can redistribute it and/or modify it under
# the terms of the GNU Lesser General Public License as published by the Free
# Software Foundation; either version 3.0 of the License, or (at your option)
# any later version.
# This library is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
# FOR A PARTICULAR PURPOSE.  See the GNU Lesser General Public License for more
# details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this library; if not, write to the Free Software Foundation, Inc.,
# 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301  USA
#------------------------------------------------------------------------------
# Startup script for a protein-centric user interface
# Author: Marco Biasini

if [ -h "$0" ]; then
  TARGET="$0"
  while [ -h "$TARGET" ]; do
    DIR="$(cd -P "$(dirname "$TARGET")" && pwd)"
    TARGET="$(readlink "$TARGET")"
    [[ $TARGET != /* ]] && TARGET="$DIR/$TARGET"
  done
  SCRIPT_PATH="$DIR/$(basename "$TARGET")"
else
  SCRIPT_PATH="$0"
fi

# Get the absolute path of the script
if command -v realpath >/dev/null 2>&1; then
  SCRIPT_PATH="$(realpath "$SCRIPT_PATH")"
elif command -v readlink >/dev/null 2>&1; then
  SCRIPT_PATH="$(readlink -f "$SCRIPT_PATH")"
else
  # Fallback for systems without realpath or readlink
  SCRIPT_PATH="$(cd "$(dirname "$SCRIPT_PATH")" && pwd -P)/$(basename "$SCRIPT_PATH")"
fi

BIN_DIR=$(dirname "$SCRIPT_PATH")
source "/usr/share/openstructure/ost_config"

opts=""

for argument in "$@";do
    if [ -n "$opts" ]; then
      opts=$opts"#""$argument"
    else
      opts="$argument"
    fi
done
IFS="#"

/usr/bin/gosty $DNG_INITDIR/dng_startup.py dng $opts