File: export_sequence_viewer.cc

package info (click to toggle)
openstructure 2.9.3-2
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid, trixie
  • size: 205,228 kB
  • sloc: cpp: 188,129; python: 35,361; ansic: 34,298; fortran: 3,275; sh: 286; xml: 146; makefile: 29
file content (122 lines) | stat: -rw-r--r-- 4,271 bytes parent folder | download | duplicates (4)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
//------------------------------------------------------------------------------
// This file is part of the OpenStructure project <www.openstructure.org>
//
// Copyright (C) 2008-2020 by the OpenStructure authors
//
// This library is free software; you can redistribute it and/or modify it under
// the terms of the GNU Lesser General Public License as published by the Free
// Software Foundation; either version 3.0 of the License, or (at your option)
// any later version.
// This library is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
// FOR A PARTICULAR PURPOSE.  See the GNU Lesser General Public License for more
// details.
//
// You should have received a copy of the GNU Lesser General Public License
// along with this library; if not, write to the Free Software Foundation, Inc.,
// 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301  USA
//------------------------------------------------------------------------------

#include <boost/python.hpp>
#include <vector>
#include <boost/python/suite/indexing/vector_indexing_suite.hpp>

#include <ost/gui/sequence_viewer/sequence_viewer.hh>

#include "sip_handler.hh"

using namespace boost::python;
using namespace ost;
using namespace ost::gui;

namespace {

void change_display_mode_a(SequenceViewer* seq_viewer, const QString& mode)
{
  seq_viewer->ChangeDisplayMode(mode);
}

void change_display_mode_b(SequenceViewer* seq_viewer, const gfx::EntityP& entity, const QString& mode)
{
  seq_viewer->ChangeDisplayMode(entity, mode);
}

void change_display_mode_c(SequenceViewer* seq_viewer, const seq::AlignmentHandle& alignment, const QString& mode)
{
  seq_viewer->ChangeDisplayMode(alignment, mode);
}

String get_current_display_mode_a(SequenceViewer* seq_viewer)
{
  return seq_viewer->GetCurrentDisplayMode().toStdString();
}

String get_current_display_mode_b(SequenceViewer* seq_viewer, const gfx::EntityP& entity)
{
  return seq_viewer->GetCurrentDisplayMode(entity).toStdString();
}

String get_current_display_mode_c(SequenceViewer* seq_viewer, const seq::AlignmentHandle& alignment)
{
  return seq_viewer->GetCurrentDisplayMode(alignment).toStdString();
}

std::vector<String> get_display_modes_a(SequenceViewer* seq_viewer)
{
  std::vector<String> modes;
  const QStringList& list = seq_viewer->GetDisplayModes();
  for (int i=0; i<list.size(); i++){
    modes.push_back(list.at(i).toStdString());
  }
  return modes;
}

std::vector<String> get_display_modes_b(SequenceViewer* seq_viewer, const gfx::EntityP& entity)
{
  std::vector<String> modes;
  const QStringList& list = seq_viewer->GetDisplayModes(entity);
  for (int i=0; i<list.size(); i++){
    modes.push_back(list.at(i).toStdString());
  }
  return modes;
}

std::vector<String> get_display_modes_c(SequenceViewer* seq_viewer, const seq::AlignmentHandle& alignment)
{
  std::vector<String> modes;
  const QStringList& list = seq_viewer->GetDisplayModes(alignment);
  for (int i=0; i<list.size(); i++){
    modes.push_back(list.at(i).toStdString());
  }
  return modes;
}

}


void export_SequenceViewer()
{
  class_<SequenceViewer, boost::noncopyable >("SequenceViewer")
    .def(init<optional<bool, bool, const QString&, 
              QWidget*> >())
    .def("Show", &SequenceViewer::show)
    .def("Hide", &SequenceViewer::hide)
    .def("AddEntity", &SequenceViewer::AddEntity)
    .def("RemoveEntity", &SequenceViewer::RemoveEntity)
    .def("SetAlignment", &SequenceViewer::SetAlignment)
    .def("AddAlignment", &SequenceViewer::AddAlignment)
    .def("RemoveAlignment", &SequenceViewer::RemoveAlignment)
    .def("GetDisplayModes", &get_display_modes_a)
    .def("GetDisplayModes", &get_display_modes_b)
    .def("GetDisplayModes", &get_display_modes_c)
    .def("GetCurrentDisplayMode", &get_current_display_mode_a)
    .def("GetCurrentDisplayMode", &get_current_display_mode_b)
    .def("GetCurrentDisplayMode", &get_current_display_mode_c)
    .def("ChangeDisplayMode",&change_display_mode_a)
    .def("ChangeDisplayMode",&change_display_mode_b)
    .def("ChangeDisplayMode",&change_display_mode_c)
    .def("GetQObject",&get_py_qobject<SequenceViewer>)
    .add_property("qobject", &get_py_qobject<SequenceViewer>)
  ;
}