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// -*- mode: C++; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*-
// vi: set et ts=4 sw=4 sts=4:
/*
This file is part of the Open Porous Media project (OPM).
OPM is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 2 of the License, or
(at your option) any later version.
OPM is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License
along with OPM. If not, see <http://www.gnu.org/licenses/>.
Consult the COPYING file in the top-level source directory of this
module for the precise wording of the license and the list of
copyright holders.
*/
#include <dune/common/version.hh>
#include <dune/common/fvector.hh>
#include <dune/common/fmatrix.hh>
#include <algorithm>
#include <fstream>
#include <stdexcept>
#include <sstream>
#include <string>
#include <vector>
namespace Ewoms {
/*!
* \brief Reads in mesh files in the ART format.
*
* This file format is used to specify grids with fractures.
*/
struct Art2DGF
{
/*!
* \brief Create the Grid
*/
static void convert( const std::string& artFileName,
std::ostream& dgfFile,
const unsigned precision = 16 )
{
using Scalar = double;
using GlobalPosition = Dune::FieldVector< Scalar, 2 >;
enum ParseMode { Vertex, Edge, Element, Finished };
std::vector< std::pair<GlobalPosition, unsigned> > vertexPos;
std::vector<std::pair<unsigned, unsigned> > edges;
std::vector<std::pair<unsigned, unsigned> > fractureEdges;
std::vector<std::vector<unsigned> > elements;
std::ifstream inStream(artFileName);
if (!inStream.is_open()) {
throw std::runtime_error("File '"+artFileName
+"' does not exist or is not readable");
}
std::string curLine;
ParseMode curParseMode = Vertex;
while (inStream) {
std::getline(inStream, curLine);
// remove comments
auto commentPos = curLine.find("%");
if (commentPos != curLine.npos) {
curLine.erase(commentPos);
}
// remove leading whitespace
unsigned numLeadingSpaces = 0;
while (curLine.size() > numLeadingSpaces
&& std::isspace(curLine[numLeadingSpaces]))
++numLeadingSpaces;
curLine = curLine.substr(numLeadingSpaces,
curLine.size() - numLeadingSpaces);
// remove trailing whitespace
unsigned numTrailingSpaces = 0;
while (curLine.size() > numTrailingSpaces
&& std::isspace(curLine[curLine.size() - numTrailingSpaces]))
++numTrailingSpaces;
curLine.erase(numTrailingSpaces);
// a section of the file is finished, go to the next one
if (curLine == "$") {
if (curParseMode == Vertex)
curParseMode = Edge;
else if (curParseMode == Edge)
curParseMode = Element;
else if (curParseMode == Element)
curParseMode = Finished;
continue;
}
// skip empty lines
if (curLine.empty())
continue;
if (curParseMode == Vertex) {
GlobalPosition coord;
std::istringstream iss(curLine);
// parse only the first two numbers as the vertex
// coordinate. the last number is the Z coordinate
// which we ignore (so far)
iss >> coord[0] >> coord[1];
vertexPos.push_back( std::make_pair( coord, 0 ) );
}
else if (curParseMode == Edge) {
// read an edge and update the fracture mapper
// read the data attached to the edge
std::istringstream iss(curLine);
int dataVal;
std::string tmp;
iss >> dataVal;
iss >> tmp;
assert(tmp == ":");
// read the vertex indices of an edge
std::vector<unsigned int> vertIndices;
while (iss) {
unsigned int tmp2;
iss >> tmp2;
if (!iss)
break;
vertIndices.push_back(tmp2);
assert(tmp2 < vertexPos.size());
}
// an edge always has two indices!
assert(vertIndices.size() == 2);
std::pair<unsigned, unsigned> edge(vertIndices[0], vertIndices[1]);
edges.push_back(edge);
// add the edge to the fracture mapper if it is a fracture
if (dataVal < 0) {
fractureEdges.push_back(edge);
vertexPos[ edge.first ].second = 1;
vertexPos[ edge.second ].second = 1;
}
}
else if (curParseMode == Element) {
// skip the data attached to an element
std::istringstream iss(curLine);
int dataVal;
std::string tmp;
iss >> dataVal;
iss >> tmp;
assert(tmp == ":");
// read the edge indices of an element
std::vector<unsigned> edgeIndices;
while (iss) {
unsigned tmp2;
iss >> tmp2;
if (!iss)
break;
edgeIndices.push_back(tmp2);
assert(tmp2 < edges.size());
}
// so far, we only support triangles
assert(edgeIndices.size() == 3);
// extract the vertex indices of the element
std::vector<unsigned> vertIndices;
for (unsigned i = 0; i < 3; ++i) {
bool haveFirstVertex = false;
for (unsigned j = 0; j < vertIndices.size(); ++j) {
assert(edgeIndices[i] < edges.size());
if (vertIndices[j] == edges[edgeIndices[i]].first) {
haveFirstVertex = true;
break;
}
}
if (!haveFirstVertex)
vertIndices.push_back(edges[edgeIndices[i]].first);
bool haveSecondVertex = false;
for (unsigned j = 0; j < vertIndices.size(); ++j) {
assert(edgeIndices[i] < edges.size());
if (vertIndices[j] == edges[edgeIndices[i]].second) {
haveSecondVertex = true;
break;
}
}
if (!haveSecondVertex)
vertIndices.push_back(edges[edgeIndices[i]].second);
}
// check whether the element's vertices are given in
// mathematically positive direction. if not, swap the
// first two.
Dune::FieldMatrix<Scalar, 2, 2> mat;
mat[0] = vertexPos[vertIndices[1]].first;
mat[0] -= vertexPos[vertIndices[0]].first;
mat[1] = vertexPos[vertIndices[2]].first;
mat[1] -= vertexPos[vertIndices[0]].first;
assert(std::abs(mat.determinant()) > 1e-50);
if (mat.determinant() < 0)
std::swap(vertIndices[2], vertIndices[1]);
elements.push_back( vertIndices );
}
else if (curParseMode == Finished) {
assert(curLine.size() == 0);
}
}
dgfFile << "DGF" << std::endl << std::endl;
dgfFile << "GridParameter" << std::endl
<< "overlap 1" << std::endl
<< "closure green" << std::endl
<< "#" << std::endl << std::endl;
dgfFile << "Vertex" << std::endl;
const bool hasFractures = fractureEdges.size() > 0;
if( hasFractures )
{
dgfFile << "parameters 1" << std::endl;
}
dgfFile << std::scientific;
dgfFile.precision( precision );
const size_t vxSize = vertexPos.size();
for( size_t i=0; i<vxSize; ++i)
{
dgfFile << vertexPos[ i ].first;
if( hasFractures )
{
dgfFile << " " << vertexPos[ i ].second;
}
dgfFile << std::endl;
}
dgfFile << "#" << std::endl << std::endl;
dgfFile << "Simplex" << std::endl;
const size_t elSize = elements.size();
for( size_t i=0; i<elSize; ++i )
{
const size_t elVx = elements[ i ].size();
for( size_t j=0; j<elVx; ++j )
dgfFile << elements[ i ][ j ] << " ";
dgfFile << std::endl;
}
dgfFile << "#" << std::endl << std::endl;
dgfFile << "BoundaryDomain" << std::endl;
dgfFile << "default 1" << std::endl;
dgfFile << "#" << std::endl << std::endl;
dgfFile << "#" << std::endl;
}
};
} // namespace Ewoms
int main( int argc, char** argv )
{
if (argc != 2) {
std::cout << "Converts a grid file from the ART file format to DGF (Dune grid format)\n"
<< "\n"
<< "Usage: " << argv[0] << " ART_FILENAME\n"
<< "\n"
<< "The result will be written to the file $ART_FILENAME.dgf\n";
return 1;
}
std::string filename( argv[ 1 ] );
std::string dgfname( filename );
dgfname += ".dgf";
std::cout << "Converting ART file \"" << filename << "\" to DGF file \"" << dgfname << "\"\n";
std::ofstream dgfFile( dgfname );
Ewoms::Art2DGF::convert( filename, dgfFile );
return 0;
}
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