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#! /usr/bin/env python3
import os
import sys
import subprocess
from setuptools import setup, find_packages, Command
from setuptools.command.install import install
from distutils.command import install_data, sdist
from distutils.command.build_ext import build_ext
from distutils.command import config, build
from distutils.core import Extension
from trubar import translate
try:
import numpy
have_numpy = True
except ImportError:
have_numpy = False
try:
# need sphinx and recommonmark for build_htmlhelp command
# pylint: disable=unused-import
import sphinx
import recommonmark
have_sphinx = True
except ImportError:
have_sphinx = False
try:
from Cython.Build import cythonize
have_cython = True
except ImportError:
have_cython = False
NAME = 'Orange3'
VERSION = '3.38.1'
ISRELEASED = True
# full version identifier including a git revision identifier for development
# build/releases (this is filled/updated in `write_version_py`)
FULLVERSION = VERSION
DESCRIPTION = 'Orange, a component-based data mining framework.'
README_FILE = os.path.join(os.path.dirname(__file__), 'README.pypi')
LONG_DESCRIPTION = open(README_FILE).read()
LONG_DESCRIPTION_CONTENT_TYPE = 'text/markdown'
AUTHOR = 'Bioinformatics Laboratory, FRI UL'
AUTHOR_EMAIL = 'info@biolab.si'
URL = 'https://orangedatamining.com/'
PROJECT_URLS = {
'Documentation': 'https://orangedatamining.com/docs',
'Source Code': 'https://github.com/biolab/orange3',
'Issue Tracker': 'https://github.com/biolab/orange3/issues',
'Donate': 'https://github.com/sponsors/biolab'
}
LICENSE = 'GPLv3+'
KEYWORDS = [
'data mining',
'machine learning',
'artificial intelligence',
]
CLASSIFIERS = [
'Development Status :: 4 - Beta',
'Environment :: X11 Applications :: Qt',
'Environment :: Console',
'Environment :: Plugins',
'Programming Language :: Python',
'License :: OSI Approved :: '
'GNU General Public License v3 or later (GPLv3+)',
'Operating System :: POSIX',
'Operating System :: Microsoft :: Windows',
'Topic :: Scientific/Engineering :: Artificial Intelligence',
'Topic :: Scientific/Engineering :: Visualization',
'Topic :: Software Development :: Libraries :: Python Modules',
'Intended Audience :: Education',
'Intended Audience :: Science/Research',
'Intended Audience :: Developers',
]
PYTHON_REQUIRES = ">=3.9"
requirements = ['requirements-core.txt', 'requirements-gui.txt']
INSTALL_REQUIRES = sorted(set(
line.partition('#')[0].strip()
for file in (os.path.join(os.path.dirname(__file__), file)
for file in requirements)
for line in open(file)
) - {''})
EXTRAS_REQUIRE = {}
ENTRY_POINTS = {
"orange.widgets": (
"Orange Widgets = Orange.widgets",
),
"orange.canvas.help": (
"html-index = Orange.widgets:WIDGET_HELP_PATH",
),
"orange.canvas.drophandler": (
"File = Orange.widgets.data.owfile:OWFileDropHandler",
"Load Model = Orange.widgets.model.owloadmodel:OWLoadModelDropHandler",
"Distance File = Orange.widgets.unsupervised.owdistancefile:OWDistanceFileDropHandler",
"Python Script = Orange.widgets.data.owpythonscript:OWPythonScriptDropHandler",
),
"gui_scripts": (
"orange-canvas = Orange.canvas.__main__:main",
),
}
DATA_FILES = []
# Return the git revision as a string
def git_version():
"""Return the git revision as a string.
Copied from numpy setup.py
"""
def _minimal_ext_cmd(cmd):
# construct minimal environment
env = {}
for k in ['SYSTEMROOT', 'PATH']:
v = os.environ.get(k)
if v is not None:
env[k] = v
# LANGUAGE is used on win32
env['LANGUAGE'] = 'C'
env['LANG'] = 'C'
env['LC_ALL'] = 'C'
out = subprocess.Popen(cmd, stdout=subprocess.PIPE, env=env).communicate()[0]
return out
try:
out = _minimal_ext_cmd(['git', 'rev-parse', 'HEAD'])
GIT_REVISION = out.strip().decode('ascii')
except OSError:
GIT_REVISION = "Unknown"
return GIT_REVISION
def write_version_py(filename='Orange/version.py'):
# Copied from numpy setup.py
cnt = """
# THIS FILE IS GENERATED FROM ORANGE SETUP.PY
short_version = '%(version)s'
version = '%(version)s'
full_version = '%(full_version)s'
git_revision = '%(git_revision)s'
release = %(isrelease)s
if not release:
version = full_version
short_version += ".dev"
"""
global FULLVERSION
FULLVERSION = VERSION
if os.path.exists('.git'):
GIT_REVISION = git_version()
elif os.path.exists('Orange/version.py'):
# must be a source distribution, use existing version file
import importlib.util
spec = importlib.util.spec_from_file_location(
"Orange.version", filename
)
version = importlib.util.module_from_spec(spec)
spec.loader.exec_module(version)
GIT_REVISION = version.git_revision
else:
GIT_REVISION = "Unknown"
if not ISRELEASED:
FULLVERSION += '.dev0+' + GIT_REVISION[:7]
a = open(filename, 'w')
try:
a.write(cnt % {'version': VERSION,
'full_version': FULLVERSION,
'git_revision': GIT_REVISION,
'isrelease': str(ISRELEASED)})
finally:
a.close()
PACKAGES = find_packages(include=("Orange*",))
# Extra non .py, .{so,pyd} files that are installed within the package dir
# hierarchy
PACKAGE_DATA = {
"Orange": ["datasets/*.{}".format(ext)
for ext in ["tab", "csv", "basket", "info", "dst", "metadata"]],
"Orange.canvas": ["icons/*.png", "icons/*.svg"],
"Orange.canvas.workflows": ["*.ows"],
"Orange.widgets": ["icons/*.png",
"icons/*.svg"],
"Orange.widgets.report": ["icons/*.svg", "*.html"],
"Orange.widgets.tests": ["datasets/*.tab",
"workflows/*.ows"],
"Orange.widgets.data": ["icons/*.svg",
"icons/paintdata/*.png",
"icons/paintdata/*.svg"],
"Orange.widgets.data.tests": ["origin1/*.tab",
"origin2/*.tab",
"*.txt", "*.tab"],
"Orange.widgets.evaluate": ["icons/*.svg"],
"Orange.widgets.model": ["icons/*.svg"],
"Orange.widgets.visualize": ["icons/*.svg"],
"Orange.widgets.unsupervised": ["icons/*.svg"],
"Orange.widgets.utils": ["_webview/*.js"],
"Orange.tests": ["xlsx_files/*.xlsx", "datasets/*.tab",
"xlsx_files/*.xls",
"datasets/*.basket", "datasets/*.csv",
"datasets/*.pkl", "datasets/*.pkl.gz"]
}
class LintCommand(Command):
"""A setup.py lint subcommand developers can run locally."""
description = "run code linter(s)"
user_options = []
initialize_options = finalize_options = lambda self: None
def run(self):
"""Lint current branch compared to a reasonable master branch"""
sys.exit(subprocess.call(r'''
set -eu
upstream="$(git remote -v |
awk '/[@\/]github.com[:\/]biolab\/orange3[\. ]/{ print $1; exit }')"
git fetch -q $upstream master
best_ancestor=$(git merge-base HEAD refs/remotes/$upstream/master)
.github/workflows/check_pylint_diff.sh $best_ancestor
''', shell=True, cwd=os.path.dirname(os.path.abspath(__file__))))
class CoverageCommand(Command):
"""A setup.py coverage subcommand developers can run locally."""
description = "run code coverage"
user_options = []
initialize_options = finalize_options = lambda self: None
def run(self):
"""Check coverage on current workdir"""
sys.exit(subprocess.call(r'''
coverage run --source=Orange -m unittest -v Orange.tests
echo; echo
coverage combine
coverage report
coverage html &&
{ echo; echo "See also: file://$(pwd)/htmlcov/index.html"; echo; }
''', shell=True, cwd=os.path.dirname(os.path.abspath(__file__))))
class build_ext_error(build_ext):
def initialize_options(self):
raise SystemExit(
"Cannot compile extensions. numpy and cython are required to "
"build Orange."
)
# ${prefix} relative install path for html help files
DATAROOTDIR = "share/help/en/orange3/htmlhelp"
def findall(startdir, followlinks=False, ):
files = (
os.path.join(base, file)
for base, dirs, files in os.walk(startdir, followlinks=followlinks)
for file in files
)
return filter(os.path.isfile, files)
def find_htmlhelp_files(subdir):
data_files = []
thisdir = os.path.dirname(__file__)
sourcedir = os.path.join(thisdir, subdir)
files = filter(
# filter out meta files
lambda path: not path.endswith((".hhc", ".hhk", ".hhp", ".stp")),
findall(sourcedir)
)
for file in files:
relpath = os.path.relpath(file, start=subdir)
relsubdir = os.path.dirname(relpath)
# path.join("a", "") results in "a/"; distutils install_data does not
# accept paths that end with "/" on windows.
if relsubdir:
targetdir = os.path.join(DATAROOTDIR, relsubdir)
else:
targetdir = DATAROOTDIR
assert not targetdir.endswith("/")
data_files.append((targetdir, [file]))
return data_files
def add_with_option(option, help="", default=None, ):
"""
A class decorator that adds a boolean --with(out)-option cmd line switch
to a distutils.cmd.Command class
Parameters
----------
option : str
Name of the option without the 'with-' part i.e. passing foo will
create a `--with-foo` and `--without-foo` options
help : str
Help for `cmd --help`. This should document the positive option (i.e.
--with-foo)
default : Optional[bool]
The default state.
Returns
-------
command : Command
Examples
--------
>>> @add_with_option("foo", "Build with foo enabled", default=False)
>>> class foobuild(build):
>>> def run(self):
>>> if self.with_foo:
>>> ...
"""
def decorator(cmdclass):
# type: (Type[Command]) -> Type[Command]
cmdclass.user_options = getattr(cmdclass, "user_options", []) + [
("with-" + option, None, help),
("without-" + option, None, ""),
]
cmdclass.boolean_options = getattr(cmdclass, "boolean_options", []) + [
("with-" + option,),
]
cmdclass.negative_opt = dict(
getattr(cmdclass, "negative_opt", {}), **{
"without-" + option: "with-" + option
}
)
setattr(cmdclass, "with_" + option, default)
return cmdclass
return decorator
_HELP = "Build and include html help files in the distribution"
@add_with_option("htmlhelp", _HELP)
class config(config.config):
# just record the with-htmlhelp option for sdist and build's default
pass
@add_with_option("htmlhelp", _HELP)
class sdist(sdist.sdist):
# build_htmlhelp to fill in distribution.data_files which are then included
# in the source dist.
sub_commands = sdist.sdist.sub_commands + [
("build_htmlhelp", lambda self: self.with_htmlhelp)
]
def finalize_options(self):
super().finalize_options()
self.set_undefined_options(
"config", ("with_htmlhelp", "with_htmlhelp")
)
@add_with_option("htmlhelp", _HELP)
class build(build.build):
sub_commands = build.build.sub_commands + [
("build_htmlhelp", lambda self: self.with_htmlhelp)
]
def finalize_options(self):
super().finalize_options()
self.set_undefined_options(
"config", ("with_htmlhelp", 'with_htmlhelp')
)
# Does the sphinx source for widget help exist the sources are in the checkout
# but not in the source distribution (sdist). The sdist already contains
# build html files.
HAVE_SPHINX_SOURCE = os.path.isdir("doc/visual-programming/source")
# Doest the build htmlhelp documentation exist
HAVE_BUILD_HTML = os.path.exists("doc/visual-programming/build/htmlhelp/index.html")
if have_sphinx and HAVE_SPHINX_SOURCE:
class build_htmlhelp(Command):
user_options = []
def finalize_options(self):
pass
def initialize_options(self):
self.build_dir = "doc/visual-programming/build"
def run(self):
subprocess.check_call([
"sphinx-build", "-b", "htmlhelp", "-d", "build/doctrees",
"-D", f"version={VERSION}",
"source", "build"
],
cwd="doc/visual-programming"
)
helpdir = os.path.join(self.build_dir, "htmlhelp")
files = find_htmlhelp_files(helpdir)
# add the build files to distribution
self.distribution.data_files.extend(files)
else:
# without sphinx we need the docs to be already build. i.e. from a
# source dist build --with-htmlhelp
class build_htmlhelp(Command):
user_options = [('build-dir=', None, 'Build directory')]
build_dir = None
def initialize_options(self):
self.build_dir = "doc/visual-programming/build"
def finalize_options(self):
pass
def run(self):
helpdir = os.path.join(self.build_dir, "htmlhelp")
if not (os.path.isdir(helpdir)
and os.path.isfile(os.path.join(helpdir, "index.html"))):
self.warn("Sphinx is needed to build help files. Skipping.")
return
files = find_htmlhelp_files(os.path.join(helpdir))
# add the build files to distribution
self.distribution.data_files.extend(files)
def ext_modules():
includes = []
libraries = []
if have_numpy:
includes.append(numpy.get_include())
if os.name == 'posix':
libraries.append("m")
modules = [
Extension(
"Orange.classification._simple_tree",
sources=[
"Orange/classification/_simple_tree.c",
],
include_dirs=includes,
libraries=libraries,
export_symbols=[
"build_tree", "destroy_tree", "new_node",
"predict_classification", "predict_regression"
]
),
Extension(
"Orange.widgets.utils._grid_density",
sources=["Orange/widgets/utils/_grid_density.cpp"],
language="c++",
include_dirs=includes,
libraries=libraries,
export_symbols=["compute_density"],
),
]
if have_cython:
modules += cythonize(Extension(
"*",
["Orange/*/*.pyx"],
include_dirs=includes,
libraries=libraries,
))
return modules
class InstallMultilingualCommand(install):
def run(self):
super().run()
self.compile_to_multilingual()
def compile_to_multilingual(self):
package_dir = os.path.dirname(os.path.abspath(__file__))
translate(
"msgs.jaml",
source_dir=os.path.join(self.install_lib, "Orange"),
config_file=os.path.join(package_dir, "i18n", "trubar-config.yaml"))
def setup_package():
write_version_py()
cmdclass = {
'install': InstallMultilingualCommand,
'lint': LintCommand,
'coverage': CoverageCommand,
'config': config,
'sdist': sdist,
'build': build,
'build_htmlhelp': build_htmlhelp,
# Use install_data from distutils, not numpy.distutils.
# numpy.distutils insist all data files are installed in site-packages
'install_data': install_data.install_data
}
if not (have_numpy and have_cython):
# substitute a build_ext command with one that raises an error when
# building. In order to fully support `pip install` we need to
# survive a `./setup egg_info` without numpy so pip can properly
# query our install dependencies
cmdclass["build_ext"] = build_ext_error
extra_args = {}
setup(
name=NAME,
version=FULLVERSION,
description=DESCRIPTION,
long_description=LONG_DESCRIPTION,
long_description_content_type=LONG_DESCRIPTION_CONTENT_TYPE,
author=AUTHOR,
author_email=AUTHOR_EMAIL,
url=URL,
project_urls=PROJECT_URLS,
license=LICENSE,
keywords=KEYWORDS,
classifiers=CLASSIFIERS,
packages=PACKAGES,
ext_modules=ext_modules(),
package_data=PACKAGE_DATA,
data_files=DATA_FILES,
install_requires=INSTALL_REQUIRES,
extras_require=EXTRAS_REQUIRE,
python_requires=PYTHON_REQUIRES,
entry_points=ENTRY_POINTS,
zip_safe=False,
test_suite='Orange.tests.suite',
cmdclass=cmdclass,
**extra_args
)
if __name__ == '__main__':
setup_package()
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