1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433 434 435 436 437 438 439 440 441 442 443 444 445 446 447 448 449 450 451 452 453 454 455 456 457 458 459 460 461 462 463 464 465 466 467 468 469 470 471 472 473 474 475 476 477 478 479 480 481 482 483 484 485 486 487 488 489 490 491 492 493 494 495 496 497 498 499 500 501 502 503 504 505 506 507 508 509 510 511 512 513 514 515 516 517 518 519 520 521 522 523 524 525 526 527 528 529 530 531 532 533 534 535 536 537 538 539 540 541 542 543 544 545 546 547 548 549 550 551 552 553 554 555 556 557 558 559 560 561 562 563 564 565 566 567 568 569 570 571 572 573 574 575 576 577 578 579 580 581 582 583 584 585 586 587 588 589 590 591 592 593 594 595 596 597 598 599 600 601 602 603 604 605 606 607 608 609 610 611 612 613 614 615 616 617 618 619 620 621 622 623 624 625 626 627 628 629 630 631 632 633 634 635 636 637 638 639 640 641 642 643 644 645 646 647 648 649 650 651 652 653 654 655 656 657 658 659 660 661 662 663 664 665 666 667 668 669 670 671 672 673 674 675 676 677 678 679 680 681 682 683 684 685 686 687 688 689 690 691 692 693 694 695 696 697 698 699 700 701 702 703 704 705 706 707 708 709 710 711 712 713 714 715 716 717 718 719 720 721 722 723 724 725 726 727 728 729 730 731 732 733 734 735 736 737 738 739 740 741 742 743 744 745 746 747 748 749 750 751 752 753 754 755 756 757 758 759 760 761 762 763 764 765 766 767 768 769 770 771 772 773 774 775 776 777 778 779 780 781 782 783 784 785 786 787 788 789 790 791 792 793 794 795 796 797 798 799 800 801 802 803 804 805 806 807 808 809 810 811 812 813 814 815 816 817 818 819 820 821 822 823 824 825 826 827 828 829 830 831 832 833 834 835 836 837 838 839 840 841 842 843 844 845 846 847 848 849 850 851 852 853 854 855 856 857 858 859 860 861 862 863 864 865 866 867 868 869 870 871 872 873 874 875 876 877 878 879 880 881 882 883 884 885 886 887 888 889 890 891 892 893 894 895 896 897 898 899 900 901 902 903 904 905 906 907 908 909 910 911 912 913 914 915 916 917 918 919 920 921 922 923 924 925 926 927 928 929 930 931 932 933 934 935 936 937 938 939 940 941 942 943 944 945 946 947 948 949 950 951 952 953 954 955 956
|
# Test methods with long descriptive names can omit docstrings
# pylint: disable=missing-docstring
# pylint: disable=protected-access
import csv
import os
import sys
import math
import unittest
import pickle
import pkgutil
import warnings
from datetime import datetime, timezone
from tempfile import NamedTemporaryFile, TemporaryDirectory
import numpy as np
import pandas as pd
import scipy.sparse as sp
from Orange.data import Variable, ContinuousVariable, DiscreteVariable, \
StringVariable, TimeVariable, Unknown, Value, Table
from Orange.data.io import CSVReader
from Orange.preprocess.transformation import Identity
from Orange.tests.base import create_pickling_tests
from Orange.util import OrangeDeprecationWarning
def is_on_path(name):
"""
Is a top level package/module found on sys.path
Parameters
----------
name : str
Top level module/package name
Returns
-------
found : bool
"""
for _, name_, _ in pkgutil.iter_modules(sys.path):
if name == name_:
return True
return False
# noinspection PyPep8Naming,PyUnresolvedReferences
class VariableTest:
def test_dont_pickle_anonymous_variables(self):
with self.assertWarns(OrangeDeprecationWarning):
self.assertRaises(pickle.PickleError, pickle.dumps, self.varcls())
def test_dont_make_anonymous_variables(self):
self.assertWarns(OrangeDeprecationWarning, self.varcls.make, "")
def test_copy_copies_attributes(self):
var = self.varcls("x")
var.attributes["a"] = "b"
var2 = var.copy(compute_value=None)
self.assertIn("a", var2.attributes)
self.assertIsInstance(var2, type(var))
var2.attributes["a"] = "c"
# Attributes of original value should not change
self.assertEqual(var.attributes["a"], "b")
def test_rename(self):
var = self.varcls_modified("x")
var2 = var.copy(name="x2")
self.assertIsInstance(var2, type(var))
self.assertIsNot(var, var2)
self.assertEqual(var2.name, "x2")
var.__dict__.pop("_name")
var2.__dict__.pop("_name")
self.assertDictEqual(var.__dict__, var2.__dict__)
def varcls_modified(self, name):
var = self.varcls(name)
var._compute_value = lambda x: x
var.sparse = True
var.attributes = {"a": 1}
return var
class TestVariable(unittest.TestCase):
@classmethod
def setUpClass(cls):
cls.var = Variable("x")
def test_name(self):
self.assertEqual(repr(self.var), "Variable(name='x')")
def test_to_val(self):
string_var = StringVariable("x")
self.assertEqual(string_var.to_val("foo"), "foo")
self.assertEqual(string_var.to_val(42), "42")
cont_var = ContinuousVariable("x")
self.assertTrue(math.isnan(cont_var.to_val("?")))
self.assertTrue(math.isnan(Unknown))
var = Variable("x")
self.assertEqual(var.to_val("x"), "x")
def test_repr_is_abstract(self):
self.assertRaises(RuntimeError, self.var.repr_val, None)
def test_properties(self):
a = ContinuousVariable("y")
self.assertTrue(a.is_continuous)
self.assertFalse(a.is_discrete)
self.assertFalse(a.is_string)
self.assertTrue(a.is_primitive())
a = DiscreteVariable("d")
self.assertFalse(a.is_continuous)
self.assertTrue(a.is_discrete)
self.assertFalse(a.is_string)
self.assertTrue(a.is_primitive())
a = StringVariable("s")
self.assertFalse(a.is_continuous)
self.assertFalse(a.is_discrete)
self.assertTrue(a.is_string)
self.assertFalse(a.is_primitive())
def test_properties_as_predicates(self):
a = ContinuousVariable("y")
self.assertTrue(Variable.is_continuous(a))
self.assertFalse(Variable.is_discrete(a))
self.assertFalse(Variable.is_string(a))
self.assertTrue(Variable.is_primitive(a))
a = StringVariable("s")
self.assertFalse(Variable.is_continuous(a))
self.assertFalse(Variable.is_discrete(a))
self.assertTrue(Variable.is_string(a))
self.assertFalse(Variable.is_primitive(a))
def test_strange_eq(self):
a = ContinuousVariable("a")
b = ContinuousVariable("a")
self.assertEqual(a, a)
self.assertEqual(a, b)
self.assertIsNot(a, b)
self.assertNotEqual(a, "somestring")
self.assertEqual(hash(a), hash(b))
def test_eq_with_compute_value(self):
a = ContinuousVariable("a")
b = ContinuousVariable("a")
self.assertEqual(a, a)
self.assertEqual(a, b)
self.assertIsNot(a, b)
a._compute_value = lambda x: x
self.assertEqual(a, a)
self.assertNotEqual(a, b)
a1 = ContinuousVariable("a")
a2 = ContinuousVariable("a")
c = ContinuousVariable("c")
a._compute_value = Identity(a1)
self.assertEqual(a, a)
self.assertEqual(a, b)
self.assertEqual(hash(a), hash(b))
b._compute_value = a.compute_value
self.assertEqual(a, b)
b._compute_value = Identity(a1)
self.assertEqual(a, b)
b._compute_value = Identity(a2)
self.assertEqual(a, b)
b._compute_value = Identity(c)
self.assertNotEqual(a, b)
b._compute_value = Identity(a2)
a1._compute_value = lambda x: x
self.assertNotEqual(a, b)
a1._compute_value = Identity(c)
self.assertNotEqual(a, b)
a2._compute_value = Identity(c)
self.assertEqual(a, b)
def test_hash(self):
a = ContinuousVariable("a")
b = ContinuousVariable("a")
self.assertEqual(hash(a), hash(b))
a._compute_value = lambda x: x
self.assertNotEqual(hash(a), hash(b))
b._compute_value = lambda x: x
self.assertNotEqual(hash(a), hash(b))
a1 = ContinuousVariable("a")
a2 = ContinuousVariable("a")
a._compute_value = Identity(a1)
self.assertNotEqual(hash(a), hash(b))
b._compute_value = Identity(a2)
self.assertEqual(hash(a), hash(b))
at = TimeVariable("a")
b = ContinuousVariable("b")
self.assertEqual(hash(a1), hash(a2))
self.assertNotEqual(hash(a1), hash(b))
self.assertNotEqual(hash(a1), hash(at))
def test_hash_eq(self):
a = ContinuousVariable("a")
a1 = ContinuousVariable("a")
b1 = ContinuousVariable("b", compute_value=Identity(a))
b2 = ContinuousVariable("b2", compute_value=Identity(b1))
b3 = ContinuousVariable("b")
c1 = ContinuousVariable("c", compute_value=Identity(a))
c2 = ContinuousVariable("c", compute_value=Identity(a))
self.assertNotEqual(a, b2)
self.assertNotEqual(b1, b2)
self.assertNotEqual(a, b1)
self.assertNotEqual(b1, b3)
self.assertEqual(a, a1)
self.assertEqual(c1, c2)
self.assertNotEqual(hash(a), hash(b2))
self.assertNotEqual(hash(b1), hash(b2))
self.assertNotEqual(hash(a), hash(b1))
self.assertNotEqual(hash(b1), hash(b3))
self.assertEqual(hash(a), hash(a1))
self.assertEqual(hash(c1), hash(c2))
def test_compute_value_eq_warning(self):
with warnings.catch_warnings(record=True) as warns:
ContinuousVariable("x")
self.assertEqual(warns, [])
ContinuousVariable("x", compute_value=lambda *_: 42)
self.assertEqual(warns, [])
class Valid:
def __eq__(self, other):
return self is other
def __hash__(self):
return super().__hash__(self)
ContinuousVariable("x", compute_value=Valid())
self.assertEqual(warns, [])
class AlsoValid:
InheritEq = True
ContinuousVariable("x", compute_value=AlsoValid())
self.assertEqual(warns, [])
class Invalid:
pass
ContinuousVariable("x", compute_value=Invalid())
self.assertNotEqual(warns, [])
with warnings.catch_warnings(record=True) as warns:
class InheritEqInherited(AlsoValid):
pass
ContinuousVariable("x", compute_value=InheritEqInherited())
self.assertNotEqual(warns, [])
with warnings.catch_warnings(record=True) as warns:
class MissingHash:
def __eq__(self, other):
return self is other
ContinuousVariable("x", compute_value=MissingHash())
self.assertNotEqual(warns, [])
with warnings.catch_warnings(record=True) as warns:
class MissingEq:
def __hash__(self):
return super().__hash__(self)
ContinuousVariable("x", compute_value=MissingEq())
self.assertNotEqual(warns, [])
def variabletest(varcls):
def decorate(cls):
return type(cls.__name__, (cls, unittest.TestCase), {'varcls': varcls})
return decorate
@variabletest(DiscreteVariable)
class TestDiscreteVariable(VariableTest):
def test_to_val(self):
values = ["F", "M"]
var = DiscreteVariable(name="Feature 0", values=values)
self.assertEqual(var.to_val(0), 0)
self.assertEqual(var.to_val("F"), 0)
self.assertEqual(var.to_val(0.), 0)
self.assertTrue(math.isnan(var.to_val("?")))
# TODO: with self.assertRaises(ValueError): var.to_val(2)
with self.assertRaises(ValueError):
var.to_val("G")
def test_make(self):
var = DiscreteVariable.make("a", values=("F", "M"))
self.assertIsInstance(var, DiscreteVariable)
self.assertEqual(var.name, "a")
self.assertEqual(var.values, ("F", "M"))
def test_val_from_str(self):
var = DiscreteVariable.make("a", values=("F", "M"))
self.assertTrue(math.isnan(var.to_val(None)))
self.assertEqual(var.to_val(1), 1)
def test_val_from_str_add(self):
var = DiscreteVariable.make("a", values=("F", "M"))
self.assertTrue(math.isnan(var.val_from_str_add(None)))
self.assertEqual(var.val_from_str_add("M"), 1)
self.assertEqual(var.val_from_str_add("F"), 0)
self.assertEqual(var.values, ("F", "M"))
self.assertEqual(var.val_from_str_add("N"), 2)
self.assertEqual(var.values, ("F", "M", "N"))
self.assertEqual(var._value_index, {"F": 0, "M": 1, "N": 2})
self.assertEqual(var.val_from_str_add("M"), 1)
self.assertEqual(var.val_from_str_add("F"), 0)
self.assertEqual(var.val_from_str_add("N"), 2)
def test_repr(self):
var = DiscreteVariable.make("a", values=("F", "M"))
self.assertEqual(
repr(var),
"DiscreteVariable(name='a', values=('F', 'M'))")
var = DiscreteVariable.make("a", values="1234567")
self.assertEqual(
repr(var),
"DiscreteVariable(name='a', values=('1', '2', '3', '4', '5', '6', '7'))"
)
def test_no_nonstringvalues(self):
self.assertRaises(TypeError, DiscreteVariable, "foo", values=("a", 42))
a = DiscreteVariable("foo", values=("a", "b", "c"))
self.assertRaises(TypeError, a.add_value, 42)
def test_no_duplicated_values(self):
a = DiscreteVariable("foo", values=["a", "b", "c"])
a.add_value("b")
self.assertEqual(list(a.values), ["a", "b", "c"])
self.assertEqual(list(a._value_index), ["a", "b", "c"])
def test_no_duplicates_in_constructor(self):
self.assertRaises(ValueError, DiscreteVariable,
"foo", values=("a", "b", "a"))
def test_unpickle(self):
d1 = DiscreteVariable("A", values=("two", "one"))
s = pickle.dumps(d1)
d2 = DiscreteVariable.make("A", values=("one", "two", "three"))
d2_values = tuple(d2.values)
d1c = pickle.loads(s)
# See: gh-3238
# The unpickle reconstruction picks an existing variable (d2), on which
# __setstate__ or __dict__.update is called
self.assertSequenceEqual(d2.values, d2_values)
self.assertSequenceEqual(d1c.values, d1.values)
s = pickle.dumps(d2)
d1 = DiscreteVariable("A", values=("one", "two"))
d2 = pickle.loads(s)
self.assertSequenceEqual(d2.values, ("one", "two", "three"))
self.assertSequenceEqual(d1.values, ("one", "two"))
def test_mapper_dense(self):
abc = DiscreteVariable("a", values=tuple("abc"))
dca = DiscreteVariable("a", values=tuple("dca"))
mapper = dca.get_mapper_from(abc)
self.assertEqual(mapper(0), 2)
self.assertTrue(np.isnan(mapper(1)))
self.assertEqual(mapper(2), 1)
self.assertEqual(mapper(0.), 2)
self.assertTrue(np.isnan(mapper(1.)))
self.assertEqual(mapper(2.), 1)
self.assertTrue(np.isnan(mapper(np.nan)))
self.assertEqual(mapper("a"), 2)
self.assertTrue(np.isnan(mapper("b")))
self.assertEqual(mapper("c"), 1)
arr = np.array([0, 0, 2, 1, 0, 1, np.nan])
self.assertIsNot(mapper(arr), arr)
np.testing.assert_array_equal(
mapper(arr), np.array([2, 2, 1, np.nan, 2, np.nan, np.nan]))
# dtype=int can have no nans; isnan shouldn't crash the mapper
arr_int = arr[:-1].astype(int)
self.assertIsNot(mapper(arr_int), arr_int)
np.testing.assert_array_equal(
mapper(arr_int), np.array([2, 2, 1, np.nan, 2, np.nan]))
arr_obj = arr.astype(object)
self.assertIsNot(mapper(arr_obj), arr_obj)
np.testing.assert_array_equal(
mapper(arr_obj), np.array([2, 2, 1, np.nan, 2, np.nan, np.nan]))
arr_list = list(arr)
self.assertIsNot(mapper(arr_list), arr_list)
self.assertTrue(
all(x == y or (np.isnan(x) and np.isnan(y))
for x, y in zip(mapper(arr_list),
[2, 2, 1, np.nan, 2, np.nan, np.nan])))
self.assertTrue(
x == y or (np.isnan(x) and np.isnan(y))
for x, y in zip(mapper(tuple(arr)),
(2, 2, 1, np.nan, 2, np.nan, np.nan)))
self.assertRaises(ValueError, mapper, object())
def test_mapper_sparse(self):
abc = DiscreteVariable("a", values=tuple("abc"))
dca = DiscreteVariable("a", values=tuple("dca"))
mapper = dca.get_mapper_from(abc)
arr = np.array([0, 0, 2, 1, 0, 1, np.nan])
# 0 does map to 0 -> convert to dense
marr = mapper(sp.csr_matrix(arr))
self.assertIsInstance(marr, np.ndarray)
np.testing.assert_array_equal(
marr,
np.array([2, 2, 1, np.nan, 2, np.nan, np.nan]))
marr = mapper(sp.csr_matrix(arr))
self.assertIsInstance(marr, np.ndarray)
np.testing.assert_array_equal(
marr,
np.array([2, 2, 1, np.nan, 2, np.nan, np.nan]))
# 0 maps to 0 -> keep sparse
acd = DiscreteVariable("a", values=tuple("acd"))
mapper = acd.get_mapper_from(abc)
arr_csr = sp.csr_matrix(arr)
marr = mapper(arr_csr)
self.assertIsNot(arr_csr, marr)
self.assertTrue(sp.isspmatrix_csr(marr))
np.testing.assert_array_equal(
marr.todense(),
np.array([[0, 0, 1, np.nan, 0, np.nan, np.nan]]))
arr_csc = sp.csc_matrix(arr)
marr = mapper(arr_csc)
self.assertIsNot(arr_csc, marr)
self.assertTrue(sp.isspmatrix_csc(marr))
np.testing.assert_array_equal(
marr.todense(),
np.array([[0, 0, 1, np.nan, 0, np.nan, np.nan]]))
def test_mapper_inplace(self):
s = list(range(7))
abc = DiscreteVariable("a", values=tuple("abc"))
dca = DiscreteVariable("a", values=tuple("dca"))
mapper = dca.get_mapper_from(abc)
arr = np.array([[0, 0, 2, 1, 0, 1, np.nan], s]).T
mapper(arr, 0)
np.testing.assert_array_equal(
arr, np.array([[2, 2, 1, np.nan, 2, np.nan, np.nan], s]).T)
self.assertRaises(ValueError, mapper, sp.csr_matrix(arr), 0)
self.assertRaises(ValueError, mapper, [1, 2, 3], 0)
self.assertRaises(ValueError, mapper, 1, 0)
acd = DiscreteVariable("a", values=tuple("acd"))
mapper = acd.get_mapper_from(abc)
arr = np.array([[0, 0, 2, 1, 0, 1, np.nan], s]).T
mapper(arr, 0)
np.testing.assert_array_equal(
arr, np.array([[0, 0, 1, np.nan, 0, np.nan, np.nan], s]).T)
arr = sp.csr_matrix(np.array([[0, 0, 2, 1, 0, 1, np.nan], s]).T)
mapper(arr, 0)
np.testing.assert_array_equal(
arr.todense(),
np.array([[0, 0, 1, np.nan, 0, np.nan, np.nan], s]).T)
arr = sp.csc_matrix(np.array([[0, 0, 2, 1, 0, 1, np.nan], s]).T)
mapper(arr, 0)
np.testing.assert_array_equal(
arr.todense(),
np.array([[0, 0, 1, np.nan, 0, np.nan, np.nan], s]).T)
def test_mapper_dim_check(self):
abc = DiscreteVariable("a", values=tuple("abc"))
dca = DiscreteVariable("a", values=tuple("dca"))
mapper = dca.get_mapper_from(abc)
self.assertRaises(ValueError, mapper, np.zeros((7, 2)))
self.assertRaises(ValueError, mapper, sp.csr_matrix(np.zeros((7, 2))))
self.assertRaises(ValueError, mapper, sp.csc_matrix(np.zeros((7, 2))))
def test_mapper_from_no_values(self):
abc = DiscreteVariable("a", values=())
dca = DiscreteVariable("a", values=tuple("dca"))
mapper = dca.get_mapper_from(abc)
arr = np.full(7, np.nan)
self.assertIsNot(mapper(arr), arr)
np.testing.assert_array_equal(mapper(arr), arr)
arr_csr = sp.csr_matrix(arr)
self.assertIsNot(arr_csr, mapper(arr_csr))
np.testing.assert_array_equal(
mapper(arr_csr).todense(), np.atleast_2d(arr))
arr_csc = sp.csc_matrix(arr)
self.assertIsNot(arr_csc, mapper(arr_csc))
np.testing.assert_array_equal(
mapper(arr_csc).todense(), np.atleast_2d(arr))
self.assertRaises(ValueError, mapper, sp.csr_matrix(arr), 0)
self.assertRaises(ValueError, mapper, sp.csc_matrix(arr), 0)
def varcls_modified(self, name):
var = super().varcls_modified(name)
var.add_value("A")
var.add_value("B")
return var
def test_copy_checks_len_values(self):
var = DiscreteVariable("gender", values=("F", "M"))
self.assertEqual(var.values, ("F", "M"))
self.assertRaises(ValueError, var.copy, values=("F", "M", "N"))
self.assertRaises(ValueError, var.copy, values=("F",))
self.assertRaises(ValueError, var.copy, values=())
var2 = var.copy()
self.assertEqual(var2.values, ("F", "M"))
var2 = var.copy(values=None)
self.assertEqual(var2.values, ("F", "M"))
var2 = var.copy(values=("W", "M"))
self.assertEqual(var2.values, ("W", "M"))
def test_pickle_backward_compatibility(self):
"""
Test that pickle made with an older version of Orange are correctly
loaded after changes in DiscreteVariable
"""
with warnings.catch_warnings():
# travis/gh-action tests change OrangeDeprecationWarning to error
# temporary disable it
warnings.simplefilter('default', OrangeDeprecationWarning)
this_dir = os.path.dirname(os.path.realpath(__file__))
datasets_dir = os.path.join(
this_dir, "..", "..", "tests", "datasets"
)
# pickle with values as list
Table(os.path.join(datasets_dir, "sailing-orange-3-20.pkl"))
# pickle with values as tuple list
Table(os.path.join(datasets_dir, "iris-orange-3-25.pkl"))
@variabletest(ContinuousVariable)
class TestContinuousVariable(VariableTest):
def test_make(self):
age1 = ContinuousVariable.make("age")
age2 = ContinuousVariable.make("age")
self.assertEqual(age1, age2)
self.assertIsNot(age1, age2)
def test_decimals(self):
a = ContinuousVariable("a", 4)
self.assertEqual(a.str_val(4.6543), "4.6543")
self.assertEqual(a.str_val(4.25), "4.2500")
self.assertEqual(a.str_val(Unknown), "?")
a = ContinuousVariable("a", 5)
self.assertEqual(a.str_val(0.000000000001), "0.00000")
a = ContinuousVariable("a", 10)
self.assertEqual(a.str_val(0.000000000001), "1e-12")
def test_more_decimals(self):
a = ContinuousVariable("a", 0)
self.assertEqual(a.str_val(4), "4")
self.assertEqual(a.str_val(4.1234), "4.12")
a = ContinuousVariable("a", 2)
self.assertEqual(a.str_val(4), "4.00")
self.assertEqual(a.str_val(4.25), "4.25")
self.assertEqual(a.str_val(4.1234123), "4.1234")
for cca4 in (4 + 1e-9, 4 - 1e-9):
assert cca4 != 4
self.assertEqual(a.str_val(cca4), "4.00")
def test_adjust_decimals(self):
# Default is 3 decimals, but format is %g
a = ContinuousVariable("a")
self.assertEqual(a.str_val(5), "5")
self.assertEqual(a.str_val(4.65432), "4.65432")
# Change to no decimals
a.val_from_str_add("5")
self.assertEqual(a.str_val(5), "5")
# Change to two decimals
a.val_from_str_add(" 5.12 ")
self.assertEqual(a.str_val(4.65), "4.65")
self.assertEqual(a.str_val(5), "5.00")
def varcls_modified(self, name):
var = super().varcls_modified(name)
var.number_of_decimals = 5
return var
@variabletest(StringVariable)
class TestStringVariable(VariableTest):
def test_val(self):
a = StringVariable("a")
self.assertEqual(a.to_val(None), "")
self.assertEqual(a.str_val(""), "?")
self.assertEqual(a.str_val(Value(a, "")), "?")
self.assertEqual(a.repr_val(Value(a, "foo")), '"foo"')
self.assertEqual(a.str_val(np.nan), "?")
self.assertEqual(a.str_val(None), "?")
@variabletest(TimeVariable)
class TestTimeVariable(VariableTest):
TESTS = [
# in str, UTC timestamp, out str (in UTC)
('2015-10-12 14:13:11.01+0200', 1444651991.01, '2015-10-12 14:13:11.010000+0200'),
('2015-10-12T14:13:11.81+0200', 1444651991.81, '2015-10-12 14:13:11.810000+0200'),
('2015-10-12 14:13:11.81', 1444659191.81, '2015-10-12 14:13:11.810000'),
('2015-10-12T14:13:11.81', 1444659191.81, '2015-10-12 14:13:11.810000'),
('2015-10-12 14:13:11+0200', 1444651991, '2015-10-12 14:13:11+0200'),
('2015-10-12T14:13:11+0200', 1444651991, '2015-10-12 14:13:11+0200'),
('20151012T141311+0200', 1444651991, '2015-10-12 14:13:11+0200'),
('20151012141311+0200', 1444651991, '2015-10-12 14:13:11+0200'),
('2015-10-12 14:13:11', 1444659191, '2015-10-12 14:13:11'),
('2015-10-12T14:13:11', 1444659191, '2015-10-12 14:13:11'),
('2015-10-12 14:13', 1444659180, '2015-10-12 14:13:00'),
('20151012T141311', 1444659191, '2015-10-12 14:13:11'),
('20151012141311', 1444659191, '2015-10-12 14:13:11'),
('2015-10-12', 1444608000, '2015-10-12'),
('20151012', 1444608000, '2015-10-12'),
('2015-285', 1444608000, '2015-10-12'),
('2015-10', 1443657600, '2015-10-01'),
('2015', 1420070400, '2015-01-01'),
('01:01:01.01', 3661.01, '01:01:01.010000'),
('010101.01', 3661.01, '01:01:01.010000'),
('01:01:01', 3661, '01:01:01'),
('01:01', 3660, '01:01:00'),
('1970-01-01 00:00:00', 0, '1970-01-01 00:00:00'),
('1969-12-31 23:59:59', -1, '1969-12-31 23:59:59'),
('1969-12-31 23:59:58.9', -1.1, '1969-12-31 23:59:58.900000'),
('1900-01-01', -2208988800, '1900-01-01'),
('nan', np.nan, '?'),
('1444651991.81', 1444651991.81, '2015-10-12 12:13:11.810000'),
]
def test_parse_repr(self):
for datestr, timestamp, outstr in self.TESTS:
var = TimeVariable('time')
ts = var.to_val(datestr) # calls parse for strings
if not np.isnan(ts):
self.assertEqual(ts, timestamp, msg=datestr)
self.assertEqual(var.repr_val(ts), outstr, msg=datestr)
def test_parse_utc(self):
var = TimeVariable('time')
datestr, offset = '2015-10-18 22:48:20', '+0200'
ts1 = var.parse(datestr + offset)
self.assertEqual(var.repr_val(ts1), datestr + offset)
# Once a value is without a TZ, all the values lose it
ts2 = var.parse(datestr)
self.assertEqual(var.repr_val(ts2), datestr)
self.assertEqual(var.repr_val(ts1), '2015-10-18 20:48:20')
# TZ is reset to UTC.
datestr, offset = '2015-10-18T22:48:20', '+02:00'
ts3 = var.parse(datestr + offset)
self.assertEqual(var.repr_val(ts3), '2015-10-18 20:48:20')
def test_parse_timestamp(self):
var = TimeVariable("time")
datestr = str(datetime(2016, 6, 14, 23, 8, tzinfo=timezone.utc).timestamp())
ts1 = var.parse(datestr)
self.assertEqual(var.repr_val(ts1), '2016-06-14 23:08:00')
def test_parse_invalid(self):
var = TimeVariable('var')
with self.assertRaises(ValueError):
var.parse('123')
def test_have_date(self):
var = TimeVariable('time')
ts = var.parse('1937-08-02') # parse date
self.assertEqual(var.repr_val(ts), '1937-08-02')
ts = var.parse('16:20') # parse time
# observe have datetime
self.assertEqual(var.repr_val(ts), '1970-01-01 16:20:00')
def test_no_date_no_time(self):
self.assertEqual(TimeVariable('relative time').repr_val(1.6), '1.6')
def test_readwrite_timevariable(self):
content = [
("Date", "Feature"),
("time", "continuous"),
("", ""),
("1920-12-12", 1.0),
("1920-12-13", 3.0),
("1920-12-14", 5.5),
]
with NamedTemporaryFile(
mode="w", delete=False, newline="", encoding="utf-8"
) as input_csv:
csv.writer(input_csv, delimiter=",").writerows(content)
table = CSVReader(input_csv.name).read()
self.assertIsInstance(table.domain["Date"], TimeVariable)
self.assertEqual(table[0, "Date"], "1920-12-12")
# Dates before 1970 are negative
self.assertTrue(all(inst["Date"] < 0 for inst in table))
with NamedTemporaryFile(mode="w", delete=False) as output_csv:
pass
CSVReader.write_file(output_csv.name, table)
with open(input_csv.name, encoding="utf-8") as in_f:
with open(output_csv.name, encoding="utf-8") as out_f:
self.assertEqual(in_f.read(), out_f.read())
os.unlink(input_csv.name)
os.unlink(output_csv.name)
def test_repr_value(self):
# https://github.com/biolab/orange3/pull/1760
var = TimeVariable('time')
self.assertEqual(var.repr_val(Value(var, 416.3)), '416.3')
def test_repr_value_out_of_bounds(self):
var = TimeVariable("T", have_date=True, have_time=True)
self.assertEqual(var.repr_val(1e300), "?")
self.assertEqual(var.repr_val(-1e300), "?")
def test_have_date_have_time_in_construct(self):
"""Test if have_time and have_date is correctly set"""
var = TimeVariable('time', have_date=1)
self.assertTrue(var.have_date)
self.assertFalse(var.have_time)
def varcls_modified(self, name):
var = super().varcls_modified(name)
var.number_of_decimals = 5
var.have_date = 1
var.have_time = 1
return var
def test_additional_formats(self):
expected_date = datetime(2022, 2, 7)
dates = {
"2021-11-25": ("2022-02-07",),
"25.11.2021": ("07.02.2022", "07. 02. 2022", "7.2.2022", "7. 2. 2022"),
"25.11.21": ("07.02.22", "07. 02. 22", "7.2.22", "7. 2. 22"),
"11/25/2021": ("02/07/2022", "2/7/2022"),
"11/25/21": ("02/07/22", "2/7/22"),
"20211125": ("20220207",),
}
expected_date_time = datetime(2022, 2, 7, 10, 11, 12)
date_times = {
"2021-11-25 00:00:00": (
"2022-02-07 10:11:12",
"2022-02-07 10:11:12.00",
),
"25.11.2021 00:00:00": (
"07.02.2022 10:11:12",
"07. 02. 2022 10:11:12",
"7.2.2022 10:11:12",
"7. 2. 2022 10:11:12",
"07.02.2022 10:11:12.00",
"07. 02. 2022 10:11:12.00",
"7.2.2022 10:11:12.00",
"7. 2. 2022 10:11:12.00",
),
"25.11.21 00:00:00": (
"07.02.22 10:11:12",
"07. 02. 22 10:11:12",
"7.2.22 10:11:12",
"7. 2. 22 10:11:12",
"07.02.22 10:11:12.00",
"07. 02. 22 10:11:12.00",
"7.2.22 10:11:12.00",
"7. 2. 22 10:11:12.00",
),
"11/25/2021 00:00:00": (
"02/07/2022 10:11:12",
"2/7/2022 10:11:12",
"02/07/2022 10:11:12.00",
"2/7/2022 10:11:12.00",
),
"11/25/21 00:00:00": (
"02/07/22 10:11:12",
"2/7/22 10:11:12",
"02/07/22 10:11:12.00",
"2/7/22 10:11:12.00",
),
"20211125000000": ("20220207101112", "20220207101112.00"),
}
# times without seconds
expected_date_time2 = datetime(2022, 2, 7, 10, 11, 0)
date_times2 = {
"2021-11-25 00:00:00": ("2022-02-07 10:11",),
"25.11.2021 00:00:00": (
"07.02.2022 10:11",
"07. 02. 2022 10:11",
"7.2.2022 10:11",
"7. 2. 2022 10:11",
),
"25.11.21 00:00:00": (
"07.02.22 10:11",
"07. 02. 22 10:11",
"7.2.22 10:11",
"7. 2. 22 10:11",
),
"11/25/2021 00:00:00": ("02/07/2022 10:11", "2/7/2022 10:11"),
"11/25/21 00:00:00": ("02/07/22 10:11", "2/7/22 10:11"),
"20211125000000": ("202202071011",),
}
# datetime defaults to 1900, 01, 01
expected_time = datetime(1900, 1, 1, 10, 11, 12)
times = {
"00:00:00": ("10:11:12", "10:11:12.00"),
"000000": ("101112", "101112.00"),
}
expected_time2 = datetime(1900, 1, 1, 10, 11, 0)
times2 = {
"00:00:00": ("10:11",),
}
expected_year = datetime(2022, 1, 1)
years = {
"2021": (2022,),
}
expected_day = datetime(1900, 2, 7)
days = {
"11-25": ("02-07",),
"25.11.": ("07.02.", "07. 02.", "7.2.", "7. 2."),
"11/25": ("02/07", "2/7"),
}
data = (
(expected_date, dates),
(expected_date_time, date_times),
(expected_date_time2, date_times2),
(expected_time, times),
(expected_time2, times2),
(expected_year, years),
(expected_day, days),
)
for expected, dts in data:
for k, dt in dts.items():
for t in dt:
parsed = [
pd.to_datetime(t, format=f, errors="coerce")
for f in TimeVariable.ADDITIONAL_FORMATS[k][0]
]
# test any equal to expected
self.assertTrue(any(d == expected for d in parsed))
# test that no other equal to any other date - only nan or expected
self.assertTrue(any(d == expected or pd.isnull(d) for d in parsed))
PickleContinuousVariable = create_pickling_tests(
"PickleContinuousVariable",
("with_name", lambda: ContinuousVariable(name="Feature 0")),
)
PickleDiscreteVariable = create_pickling_tests(
"PickleDiscreteVariable",
("with_name", lambda: DiscreteVariable(name="Feature 0")),
("with_str_value", lambda: DiscreteVariable(name="Feature 0",
values=("F", "M")))
)
PickleStringVariable = create_pickling_tests(
"PickleStringVariable",
("with_name", lambda: StringVariable(name="Feature 0"))
)
class VariableTestMakeProxy(unittest.TestCase):
def test_make_proxy_disc(self):
abc = DiscreteVariable("abc", values="abc")
abc1 = abc.make_proxy()
abc2 = abc1.make_proxy()
self.assertEqual(abc, abc1)
self.assertEqual(abc, abc2)
self.assertEqual(abc1, abc2)
self.assertEqual(hash(abc), hash(abc1))
self.assertEqual(hash(abc1), hash(abc2))
abcx = DiscreteVariable("abc", values="abc")
self.assertEqual(abc, abcx)
self.assertIsNot(abc, abcx)
abc1p = pickle.loads(pickle.dumps(abc1))
self.assertEqual(abc1p, abc)
abcp, abc1p, abc2p = pickle.loads(pickle.dumps((abc, abc1, abc2)))
self.assertEqual(abcp, abc1p)
self.assertEqual(abcp, abc2p)
self.assertEqual(abc1p, abc2p)
def test_make_proxy_cont(self):
abc = ContinuousVariable("abc")
abc1 = abc.make_proxy()
abc2 = abc1.make_proxy()
self.assertEqual(abc, abc1)
self.assertEqual(abc, abc2)
self.assertEqual(abc1, abc2)
self.assertEqual(hash(abc), hash(abc1))
self.assertEqual(hash(abc1), hash(abc2))
def test_proxy_has_separate_attributes(self):
image = StringVariable("image")
image1 = image.make_proxy()
image2 = image1.make_proxy()
image.attributes["origin"] = "a"
image1.attributes["origin"] = "b"
image2.attributes["origin"] = "c"
self.assertEqual(image.attributes["origin"], "a")
self.assertEqual(image1.attributes["origin"], "b")
self.assertEqual(image2.attributes["origin"], "c")
if __name__ == "__main__":
unittest.main()
|