File: ImageAccessor.cpp

package info (click to toggle)
orthanc 0.8.4%2Bdfsg-1
  • links: PTS, VCS
  • area: main
  • in suites: jessie, jessie-kfreebsd
  • size: 7,112 kB
  • ctags: 5,342
  • sloc: cpp: 33,492; ansic: 3,770; python: 548; xml: 167; sh: 148; sql: 101; makefile: 44
file content (221 lines) | stat: -rw-r--r-- 5,910 bytes parent folder | download
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
/**
 * Orthanc - A Lightweight, RESTful DICOM Store
 * Copyright (C) 2012-2014 Medical Physics Department, CHU of Liege,
 * Belgium
 *
 * This program is free software: you can redistribute it and/or
 * modify it under the terms of the GNU General Public License as
 * published by the Free Software Foundation, either version 3 of the
 * License, or (at your option) any later version.
 *
 * In addition, as a special exception, the copyright holders of this
 * program give permission to link the code of its release with the
 * OpenSSL project's "OpenSSL" library (or with modified versions of it
 * that use the same license as the "OpenSSL" library), and distribute
 * the linked executables. You must obey the GNU General Public License
 * in all respects for all of the code used other than "OpenSSL". If you
 * modify file(s) with this exception, you may extend this exception to
 * your version of the file(s), but you are not obligated to do so. If
 * you do not wish to do so, delete this exception statement from your
 * version. If you delete this exception statement from all source files
 * in the program, then also delete it here.
 * 
 * This program is distributed in the hope that it will be useful, but
 * WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
 * General Public License for more details.
 *
 * You should have received a copy of the GNU General Public License
 * along with this program. If not, see <http://www.gnu.org/licenses/>.
 **/


#include "../PrecompiledHeaders.h"
#include "ImageAccessor.h"

#include "../OrthancException.h"
#include "../ChunkedBuffer.h"

#include <stdint.h>
#include <cassert>
#include <glog/logging.h>
#include <boost/lexical_cast.hpp>

namespace Orthanc
{
  template <typename PixelType>
  static void ToMatlabStringInternal(ChunkedBuffer& target,
                                     const ImageAccessor& source)
  {
    target.AddChunk("double([ ");

    for (unsigned int y = 0; y < source.GetHeight(); y++)
    {
      const PixelType* p = reinterpret_cast<const PixelType*>(source.GetConstRow(y));

      std::string s;
      if (y > 0)
      {
        s = "; ";
      }

      s.reserve(source.GetWidth() * 8);

      for (unsigned int x = 0; x < source.GetWidth(); x++, p++)
      {
        s += boost::lexical_cast<std::string>(static_cast<int>(*p)) + " ";
      }

      target.AddChunk(s);
    }

    target.AddChunk("])");
  }


  static void RGB24ToMatlabString(ChunkedBuffer& target,
                                  const ImageAccessor& source)
  {
    assert(source.GetFormat() == PixelFormat_RGB24);

    target.AddChunk("double(permute(reshape([ ");

    for (unsigned int y = 0; y < source.GetHeight(); y++)
    {
      const uint8_t* p = reinterpret_cast<const uint8_t*>(source.GetConstRow(y));
      
      std::string s;
      s.reserve(source.GetWidth() * 3 * 8);
      
      for (unsigned int x = 0; x < 3 * source.GetWidth(); x++, p++)
      {
        s += boost::lexical_cast<std::string>(static_cast<int>(*p)) + " ";
      }
      
      target.AddChunk(s);
    }

    target.AddChunk("], [ 3 " + boost::lexical_cast<std::string>(source.GetHeight()) +
                    " " + boost::lexical_cast<std::string>(source.GetWidth()) + " ]), [ 3 2 1 ]))");
  }


  void* ImageAccessor::GetBuffer() const
  {
    if (readOnly_)
    {
      LOG(ERROR) << "Trying to write on a read-only image";
      throw OrthancException(ErrorCode_ReadOnly);
    }

    return buffer_;
  }


  const void* ImageAccessor::GetConstRow(unsigned int y) const
  {
    if (buffer_ != NULL)
    {
      return reinterpret_cast<const uint8_t*>(buffer_) + y * pitch_;
    }
    else
    {
      return NULL;
    }
  }


  void* ImageAccessor::GetRow(unsigned int y) const
  {
    if (readOnly_)
    {
      LOG(ERROR) << "Trying to write on a read-only image";
      throw OrthancException(ErrorCode_ReadOnly);
    }

    if (buffer_ != NULL)
    {
      return reinterpret_cast<uint8_t*>(buffer_) + y * pitch_;
    }
    else
    {
      return NULL;
    }
  }


  void ImageAccessor::AssignEmpty(PixelFormat format)
  {
    readOnly_ = false;
    format_ = format;
    width_ = 0;
    height_ = 0;
    pitch_ = 0;
    buffer_ = NULL;
  }


  void ImageAccessor::AssignReadOnly(PixelFormat format,
                                     unsigned int width,
                                     unsigned int height,
                                     unsigned int pitch,
                                     const void *buffer)
  {
    readOnly_ = true;
    format_ = format;
    width_ = width;
    height_ = height;
    pitch_ = pitch;
    buffer_ = const_cast<void*>(buffer);

    assert(GetBytesPerPixel() * width_ <= pitch_);
  }


  void ImageAccessor::AssignWritable(PixelFormat format,
                                     unsigned int width,
                                     unsigned int height,
                                     unsigned int pitch,
                                     void *buffer)
  {
    readOnly_ = false;
    format_ = format;
    width_ = width;
    height_ = height;
    pitch_ = pitch;
    buffer_ = buffer;

    assert(GetBytesPerPixel() * width_ <= pitch_);
  }


  void ImageAccessor::ToMatlabString(std::string& target) const
  {
    ChunkedBuffer buffer;

    switch (GetFormat())
    {
      case PixelFormat_Grayscale8:
        ToMatlabStringInternal<uint8_t>(buffer, *this);
        break;

      case PixelFormat_Grayscale16:
        ToMatlabStringInternal<uint16_t>(buffer, *this);
        break;

      case PixelFormat_SignedGrayscale16:
        ToMatlabStringInternal<int16_t>(buffer, *this);
        break;

      case PixelFormat_RGB24:
        RGB24ToMatlabString(buffer, *this);
        break;

      default:
        throw OrthancException(ErrorCode_NotImplemented);
    }   

    buffer.Flatten(target);
  }

}