1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
|
/*=========================================================================
Program: ORFEO Toolbox
Language: C++
Date: $Date$
Version: $Revision$
Copyright (c) Centre National d'Etudes Spatiales. All rights reserved.
See OTBCopyright.txt for details.
This software is distributed WITHOUT ANY WARRANTY; without even
the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
PURPOSE. See the above copyright notices for more information.
=========================================================================*/
#ifndef otbMaskMuParserFilter_txx
#define otbMaskMuParserFilter_txx
#include "otbMaskMuParserFilter.h"
#include <iostream>
#include <string>
#include "itkImageRegionIterator.h"
#include "itkNumericTraits.h"
namespace otb
{
// constructor
template<class TInputImage, class TOutputImage, class TFunction>
MaskMuParserFilter<TInputImage, TOutputImage, TFunction>::MaskMuParserFilter()
{
m_UnderflowCount = 0;
m_OverflowCount = 0;
m_ThreadUnderflow.SetSize(1);
m_ThreadOverflow.SetSize(1);
m_Expression="";
}
// Destructor
template<class TInputImage, class TOutputImage, class TFunction>
MaskMuParserFilter<TInputImage, TOutputImage, TFunction>::~MaskMuParserFilter()
{
}
template<class TInputImage, class TOutputImage, class TFunction>
void MaskMuParserFilter<TInputImage, TOutputImage, TFunction>::PrintSelf(std::ostream& os, itk::Indent indent) const
{
Superclass::PrintSelf(os, indent);
os << indent << "Expression: " << m_Expression << std::endl;
}
template<class TInputImage, class TOutputImage, class TFunction>
void MaskMuParserFilter<TInputImage, TOutputImage, TFunction>::SetExpression(const std::string expression)
{
if (m_Expression != expression) m_Expression = expression;
this->Modified();
}
template<class TInputImage, class TOutputImage, class TFunction>
std::string MaskMuParserFilter<TInputImage, TOutputImage, TFunction>::GetExpression() const
{
return m_Expression;
}
template<class TInputImage, class TOutputImage, class TFunction>
std::vector<std::string> MaskMuParserFilter<TInputImage, TOutputImage, TFunction>::GetVar()
{
std::vector<std::string> varList;
FunctorPointer tempFunctor = FunctorType::New();
tempFunctor->SetExpression(m_Expression);
FunctorType& functor = *tempFunctor;
try
{
functor(this->GetInput()->GetPixel(this->GetInput()->GetBufferedRegion().GetIndex()));
}
catch (itk::ExceptionObject& err)
{
itkDebugMacro(<< err);
}
const std::map<std::string, double*>& varMap = functor.GetVar();
std::map<std::string, double*>::const_iterator it;
for (it = varMap.begin(); it != varMap.end(); ++it)
{
varList.push_back( it->first );
}
return varList;
}
template<class TInputImage, class TOutputImage, class TFunction>
Parser::FunctionMapType MaskMuParserFilter<TInputImage, TOutputImage, TFunction>::GetFunList()
{
FunctorPointer tempFunctor = FunctorType::New();
tempFunctor->SetExpression(m_Expression);
FunctorType& functor = *tempFunctor;
try
{
functor(this->GetInput()->GetPixel(this->GetInput()->GetBufferedRegion().GetIndex()));
}
catch (itk::ExceptionObject& err)
{
itkDebugMacro(<< err);
}
return functor.GetFunList();
}
template<class TInputImage, class TOutputImage, class TFunction>
bool MaskMuParserFilter<TInputImage, TOutputImage, TFunction>::CheckExpression()
{
FunctorPointer checkFunctor = FunctorType::New();
checkFunctor->SetExpression(m_Expression);
FunctorType& functor = *checkFunctor;
try
{
functor(this->GetInput()->GetPixel(this->GetInput()->GetBufferedRegion().GetIndex()));
}
catch (itk::ExceptionObject& err)
{
itkDebugMacro(<< err);
return false;
}
return true;
}
/**
* BeforeThreadedGenerateData
*/
template<class TInputImage, class TOutputImage, class TFunction>
void MaskMuParserFilter<TInputImage, TOutputImage, TFunction>::BeforeThreadedGenerateData()
{
typename std::vector<FunctorPointer>::iterator itFunctor;
unsigned int nbThreads = this->GetNumberOfThreads();
unsigned int thread_index;
std::ostringstream varName;
// Allocate and initialize the thread temporaries
m_ThreadUnderflow.SetSize(nbThreads);
m_ThreadUnderflow.Fill(0);
m_ThreadOverflow.SetSize(nbThreads);
m_ThreadOverflow.Fill(0);
m_VFunctor.resize(nbThreads);
for (itFunctor = m_VFunctor.begin(); itFunctor < m_VFunctor.end(); itFunctor++)
*itFunctor = FunctorType::New();
for (thread_index = 0; thread_index < nbThreads; thread_index++)
{
m_VFunctor.at(thread_index)->SetExpression(m_Expression);
}
}
template<class TInputImage, class TOutputImage, class TFunction>
void MaskMuParserFilter<TInputImage, TOutputImage, TFunction>::ThreadedGenerateData(
const OutputImageRegionType &outputRegionForThread,
itk::ThreadIdType threadId)
{
InputImageConstPointer inputPtr = this->GetInput();
OutputImagePointer outputPtr = this->GetOutput(0);
// Define the portion of the input to walk for this thread, using
// the CallCopyOutputRegionToInputRegion method allows for the input
// and output images to be different dimensions
InputImageRegionType inputRegionForThread;
this->CallCopyOutputRegionToInputRegion(inputRegionForThread, outputRegionForThread);
// Define the iterators
itk::ImageRegionConstIterator<TInputImage> inputIt(inputPtr, inputRegionForThread);
itk::ImageRegionIterator<TOutputImage> outputIt(outputPtr, outputRegionForThread);
itk::ProgressReporter progress(this, threadId, outputRegionForThread.GetNumberOfPixels());
inputIt.GoToBegin();
outputIt.GoToBegin();
FunctorPointer functorP = m_VFunctor.at(threadId);
FunctorType& functor = *functorP;
while (!inputIt.IsAtEnd())
{
outputIt.Set(functor(inputIt.Get()));
++inputIt;
++outputIt;
progress.CompletedPixel(); // potential exception thrown here
}
}
template<class TInputImage, class TOutputImage, class TFunction>
void MaskMuParserFilter<TInputImage, TOutputImage, TFunction>::AfterThreadedGenerateData()
{
}
} // end namespace otb
#endif
|
